RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 RAD54LQ92698 747 aa17.72■□□□□ 0.43
PDZRN3-201ENST00000263666 PTPN22Q9Y2R2 807 aa17.72■□□□□ 0.43
PDZRN3-201ENST00000263666 ADAMTSL3P82987 1691 aa17.72■□□□□ 0.43
PDZRN3-201ENST00000263666 RC3H1Q5TC82 1133 aaKnown RBP17.72■□□□□ 0.43
PDZRN3-201ENST00000263666 FBXW10Q5XX13 1052 aa17.72■□□□□ 0.43
PDZRN3-201ENST00000263666 APTXQ7Z2E3 356 aaKnown RBP17.72■□□□□ 0.43
PDZRN3-201ENST00000263666 SFR1Q86XK3 245 aa17.72■□□□□ 0.43
PDZRN3-201ENST00000263666 NKRFO15226 690 aaKnown RBP eCLIP17.72■□□□□ 0.43
PDZRN3-201ENST00000263666 COPB2P35606 906 aa17.72■□□□□ 0.43
PDZRN3-201ENST00000263666 GIMAP7Q8NHV1 300 aa17.72■□□□□ 0.43
PDZRN3-201ENST00000263666 TEKT1Q969V4 418 aa17.72■□□□□ 0.43
PDZRN3-201ENST00000263666 GOLGA8KD6RF30 607 aa17.71■□□□□ 0.43
PDZRN3-201ENST00000263666 SPOPO43791 374 aa17.71■□□□□ 0.43
PDZRN3-201ENST00000263666 SLC9A1P19634 815 aa17.71■□□□□ 0.43
PDZRN3-201ENST00000263666 NT5C3AQ9H0P0 336 aa17.71■□□□□ 0.43
PDZRN3-201ENST00000263666 SH2D4AQ9H788 454 aa17.71■□□□□ 0.43
PDZRN3-201ENST00000263666 STAT1P42224 750 aa17.71■□□□□ 0.43
PDZRN3-201ENST00000263666 SF3B3Q15393 1217 aaKnown RBP17.71■□□□□ 0.43
PDZRN3-201ENST00000263666 WDR78Q5VTH9 848 aa17.71■□□□□ 0.43
PDZRN3-201ENST00000263666 GJB7Q6PEY0 223 aa17.71■□□□□ 0.43
PDZRN3-201ENST00000263666 KCNK18Q7Z418 384 aa17.71■□□□□ 0.43
PDZRN3-201ENST00000263666 ADGRF4Q8IZF3 695 aa17.71■□□□□ 0.43
PDZRN3-201ENST00000263666 KBTBD4Q9NVX7 518 aa17.71■□□□□ 0.43
PDZRN3-201ENST00000263666 GCNT4Q9P109 453 aa17.71■□□□□ 0.43
PDZRN3-201ENST00000263666 PLAAQ9Y263 795 aa17.71■□□□□ 0.43
PDZRN3-201ENST00000263666 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.71■□□□□ 0.43
PDZRN3-201ENST00000263666 ZNF384Q8TF68 577 aa17.71■□□□□ 0.43
PDZRN3-201ENST00000263666 CCDC127Q96BQ5 260 aa17.71■□□□□ 0.43
PDZRN3-201ENST00000263666 MTMR8Q96EF0 704 aa17.71■□□□□ 0.43
PDZRN3-201ENST00000263666 DNAJC7Q99615 494 aa17.71■□□□□ 0.43
PDZRN3-201ENST00000263666 SH3GLB2Q9NR46 395 aa17.71■□□□□ 0.43
PDZRN3-201ENST00000263666 STK17AQ9UEE5 414 aa17.71■□□□□ 0.43
PDZRN3-201ENST00000263666 KDM3BQ7LBC6 1761 aa17.71■□□□□ 0.42
PDZRN3-201ENST00000263666 TTLL1O95922 423 aa17.71■□□□□ 0.42
PDZRN3-201ENST00000263666 NR1D1P20393 614 aa17.71■□□□□ 0.42
PDZRN3-201ENST00000263666 SPATA20Q8TB22 786 aa17.71■□□□□ 0.42
PDZRN3-201ENST00000263666 UTP11Q9Y3A2 253 aaKnown RBP17.71■□□□□ 0.42
PDZRN3-201ENST00000263666 ZBTB7AO95365 584 aa17.7■□□□□ 0.42
PDZRN3-201ENST00000263666 TMEM132AQ24JP5 1023 aa17.7■□□□□ 0.42
PDZRN3-201ENST00000263666 NIM1KQ8IY84 436 aa17.7■□□□□ 0.42
PDZRN3-201ENST00000263666 ELOA2Q8IYF1 753 aaPredicted RBP17.7■□□□□ 0.42
PDZRN3-201ENST00000263666 LMBR1Q8WVP7 490 aa17.7■□□□□ 0.42
PDZRN3-201ENST00000263666 NOVA2Q9UNW9 492 aaKnown RBP17.7■□□□□ 0.42
PDZRN3-201ENST00000263666 FRMD4BQ9Y2L6 1034 aa17.7■□□□□ 0.42
PDZRN3-201ENST00000263666 PLTPP55058 493 aa17.7■□□□□ 0.42
PDZRN3-201ENST00000263666 CETN1Q12798 172 aa17.7■□□□□ 0.42
PDZRN3-201ENST00000263666 GRB10Q13322 594 aa17.7■□□□□ 0.42
PDZRN3-201ENST00000263666 CCDC26Q8TAB7 109 aa17.7■□□□□ 0.42
PDZRN3-201ENST00000263666 HNRNPLLQ8WVV9 542 aaKnown RBP17.7■□□□□ 0.42
PDZRN3-201ENST00000263666 RGPD5Q99666 1765 aa17.7■□□□□ 0.42
PDZRN3-201ENST00000263666 MAP2K7O14733 419 aa17.7■□□□□ 0.42
PDZRN3-201ENST00000263666 SERPING1P05155 500 aa17.7■□□□□ 0.42
PDZRN3-201ENST00000263666 PNMA8AQ86V59 439 aaPredicted RBP17.7■□□□□ 0.42
PDZRN3-201ENST00000263666 RGL1Q9NZL6 768 aa17.7■□□□□ 0.42
PDZRN3-201ENST00000263666 AMACRQ9UHK6 382 aa17.7■□□□□ 0.42
PDZRN3-201ENST00000263666 A0A087X0T9 212 aa17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 ANO9A1A5B4 782 aa17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 FAM228BP0C875 321 aa17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 PBX1P40424 430 aa17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 DHX9Q08211 1270 aaKnown RBP17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 CERKLQ49MI3 558 aaPredicted RBP17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 ZNF746Q6NUN9 644 aaPredicted RBP17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 PDXDC1Q6P996 788 aa17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 SUPT20HQ8NEM7 779 aa17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 BCL9O00512 1426 aa17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 IRAK1P51617 712 aa17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 ICA1Q05084 483 aa17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 PPP1R7Q15435 360 aa17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 NPY5RQ15761 445 aa17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 GBP6Q6ZN66 633 aa17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 B4GALNT4Q76KP1 1039 aa17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 ARFGAP2Q8N6H7 521 aa17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 KIF1AQ12756 1690 aa17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 CALUO43852 315 aaPredicted RBP17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 MYL1P05976 194 aa17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 LRRC63Q05C16 580 aa17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 CCDC50Q8IVM0 306 aa17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 ZIM3Q96PE6 472 aa17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 AMFRQ9UKV5 643 aa17.69■□□□□ 0.42
PDZRN3-201ENST00000263666 NPR1P16066 1061 aa17.68■□□□□ 0.42
PDZRN3-201ENST00000263666 PRR5LQ6MZQ0 368 aa17.68■□□□□ 0.42
PDZRN3-201ENST00000263666 CAPN12Q6ZSI9 719 aa17.68■□□□□ 0.42
PDZRN3-201ENST00000263666 GUF1Q8N442 669 aaKnown RBP17.68■□□□□ 0.42
PDZRN3-201ENST00000263666 NEDD1Q8NHV4 660 aa17.68■□□□□ 0.42
PDZRN3-201ENST00000263666 MAGEF1Q9HAY2 307 aa17.68■□□□□ 0.42
PDZRN3-201ENST00000263666 RAB21Q9UL25 225 aa17.68■□□□□ 0.42
PDZRN3-201ENST00000263666 MED1Q15648 1581 aaPredicted RBP17.68■□□□□ 0.42
PDZRN3-201ENST00000263666 FLT1P17948 1338 aa17.68■□□□□ 0.42
PDZRN3-201ENST00000263666 CCDC169A6NNP5 214 aa17.68■□□□□ 0.42
PDZRN3-201ENST00000263666 TRIM49P0CI25 452 aa17.68■□□□□ 0.42
PDZRN3-201ENST00000263666 TRIM49CP0CI26 452 aa17.68■□□□□ 0.42
PDZRN3-201ENST00000263666 HARSP12081 509 aaKnown RBP17.68■□□□□ 0.42
PDZRN3-201ENST00000263666 EEF2P13639 858 aaKnown RBP17.68■□□□□ 0.42
PDZRN3-201ENST00000263666 MESDQ14696 234 aa17.68■□□□□ 0.42
PDZRN3-201ENST00000263666 DLGAP5Q15398 846 aa17.68■□□□□ 0.42
PDZRN3-201ENST00000263666 ANKRD42Q8N9B4 389 aa17.68■□□□□ 0.42
PDZRN3-201ENST00000263666 BICD1Q96G01 975 aa17.68■□□□□ 0.42
PDZRN3-201ENST00000263666 RIC8AQ9NPQ8 531 aa17.68■□□□□ 0.42
PDZRN3-201ENST00000263666 C21orf2O43822 256 aa17.68■□□□□ 0.42
PDZRN3-201ENST00000263666 LRRC45Q96CN5 670 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms