RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 TTC25Q96NG3 672 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 MRPL47Q9HD33 250 aaKnown RBP14.3□□□□□ -0.12
COL1A1-201ENST00000225964 SURF1Q15526 300 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 ZBTB41Q5SVQ8 909 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 CYP4F22Q6NT55 531 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 URGCPQ8TCY9 931 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 PRDM5Q9NQX1 630 aaPredicted RBP14.3□□□□□ -0.12
COL1A1-201ENST00000225964 CARMIL3Q8ND23 1372 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 ZBBXA8MT70 800 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 HNRNPCL2B2RXH8 293 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 HNRNPCL1O60812 293 aaKnown RBP14.3□□□□□ -0.12
COL1A1-201ENST00000225964 CASP14P31944 242 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 RBM6P78332 1123 aaKnown RBP14.3□□□□□ -0.12
COL1A1-201ENST00000225964 TRIP13Q15645 432 aaPredicted RBP14.3□□□□□ -0.12
COL1A1-201ENST00000225964 FRA10AC1Q70Z53 315 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 TTLL6Q8N841 843 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 MYRIPQ8NFW9 859 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 GNAT1P11488 350 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 GCFC2P16383 781 aaKnown RBP14.3□□□□□ -0.12
COL1A1-201ENST00000225964 NOP14P78316 857 aaKnown RBP14.3□□□□□ -0.12
COL1A1-201ENST00000225964 PROSER3Q2NL68 480 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 CATSPER4Q7RTX7 472 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 PPWD1Q96BP3 646 aaKnown RBP14.3□□□□□ -0.12
COL1A1-201ENST00000225964 ADD2P35612 726 aa14.29□□□□□ -0.12
COL1A1-201ENST00000225964 GOLGA8FQ08AF8 430 aa14.29□□□□□ -0.12
COL1A1-201ENST00000225964 GOLGA8DPQ0D2H9 430 aa14.29□□□□□ -0.12
COL1A1-201ENST00000225964 TRIM67Q6ZTA4 783 aa14.29□□□□□ -0.12
COL1A1-201ENST00000225964 PARVGQ9HBI0 331 aa14.29□□□□□ -0.12
COL1A1-201ENST00000225964 ADGBQ8N7X0 1667 aa14.29□□□□□ -0.12
COL1A1-201ENST00000225964 EFCAB8A8MWE9 144 aa14.29□□□□□ -0.12
COL1A1-201ENST00000225964 ESRRBO95718 433 aa14.29□□□□□ -0.12
COL1A1-201ENST00000225964 PRPF38AQ8NAV1 312 aaKnown RBP14.29□□□□□ -0.12
COL1A1-201ENST00000225964 ERBB4Q15303 1308 aa14.29□□□□□ -0.12
COL1A1-201ENST00000225964 ECEL1O95672 775 aa14.29□□□□□ -0.12
COL1A1-201ENST00000225964 PPARGP37231 505 aaPredicted RBP14.29□□□□□ -0.12
COL1A1-201ENST00000225964 HAUS4Q9H6D7 363 aa14.29□□□□□ -0.12
COL1A1-201ENST00000225964 ENC1O14682 589 aa14.29□□□□□ -0.12
COL1A1-201ENST00000225964 NFKBIAP25963 317 aa14.29□□□□□ -0.12
COL1A1-201ENST00000225964 RBL2Q08999 1139 aa14.29□□□□□ -0.12
COL1A1-201ENST00000225964 DHTKD1Q96HY7 919 aaPredicted RBP14.29□□□□□ -0.12
COL1A1-201ENST00000225964 RMDN2Q96LZ7 410 aa14.29□□□□□ -0.12
COL1A1-201ENST00000225964 HIP1RO75146 1068 aa14.29□□□□□ -0.12
COL1A1-201ENST00000225964 MECOMQ03112 1051 aa14.29□□□□□ -0.12
COL1A1-201ENST00000225964 ZMYM1Q5SVZ6 1142 aa14.29□□□□□ -0.12
COL1A1-201ENST00000225964 ZNF658Q5TYW1 1059 aaPredicted RBP14.29□□□□□ -0.12
COL1A1-201ENST00000225964 TCP11Q8WWU5 503 aa14.29□□□□□ -0.12
COL1A1-201ENST00000225964 PIDD1Q9HB75 910 aa14.29□□□□□ -0.12
COL1A1-201ENST00000225964 KRT82Q9NSB4 513 aa14.29□□□□□ -0.12
COL1A1-201ENST00000225964 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.29□□□□□ -0.12
COL1A1-201ENST00000225964 TTI1O43156 1089 aa14.28□□□□□ -0.12
COL1A1-201ENST00000225964 PPP6R2O75170 966 aa14.28□□□□□ -0.12
COL1A1-201ENST00000225964 PLA2G4BP0C869 781 aa14.28□□□□□ -0.12
COL1A1-201ENST00000225964 IFNAR2P48551 515 aa14.28□□□□□ -0.12
COL1A1-201ENST00000225964 C2orf54Q08AI8 447 aa14.28□□□□□ -0.12
COL1A1-201ENST00000225964 RNF26Q9BY78 433 aaPredicted RBP14.28□□□□□ -0.12
COL1A1-201ENST00000225964 G3BP2Q9UN86 482 aaKnown RBP14.28□□□□□ -0.12
COL1A1-201ENST00000225964 ABCC4O15439 1325 aa14.28□□□□□ -0.12
COL1A1-201ENST00000225964 TMEM94Q12767 1356 aa14.28□□□□□ -0.12
COL1A1-201ENST00000225964 GNL1P36915 607 aaPredicted RBP14.28□□□□□ -0.12
COL1A1-201ENST00000225964 PPP1R2P3Q6NXS1 205 aa14.28□□□□□ -0.12
COL1A1-201ENST00000225964 MOCS3O95396 460 aa14.28□□□□□ -0.12
COL1A1-201ENST00000225964 HABP4Q5JVS0 413 aaKnown RBP14.28□□□□□ -0.12
COL1A1-201ENST00000225964 TRIM42Q8IWZ5 723 aa14.28□□□□□ -0.12
COL1A1-201ENST00000225964 FBXL13Q8NEE6 735 aa14.28□□□□□ -0.12
COL1A1-201ENST00000225964 TMEM63CQ9P1W3 806 aa14.28□□□□□ -0.12
COL1A1-201ENST00000225964 RECQLP46063 649 aaPredicted RBP14.28□□□□□ -0.12
COL1A1-201ENST00000225964 RC3H1Q5TC82 1133 aaKnown RBP14.28□□□□□ -0.12
COL1A1-201ENST00000225964 KLC3Q6P597 504 aa14.28□□□□□ -0.12
COL1A1-201ENST00000225964 SCN4BQ8IWT1 228 aa14.28□□□□□ -0.12
COL1A1-201ENST00000225964 LRRC8AQ8IWT6 810 aa14.28□□□□□ -0.12
COL1A1-201ENST00000225964 GRAMD1CQ8IYS0 662 aa14.28□□□□□ -0.12
COL1A1-201ENST00000225964 FAM135BQ49AJ0 1406 aa14.28□□□□□ -0.12
COL1A1-201ENST00000225964 hCG_1984214I3L0E3 225 aa14.28□□□□□ -0.12
COL1A1-201ENST00000225964 BRD1O95696 1058 aa14.28□□□□□ -0.12
COL1A1-201ENST00000225964 LTKP29376 864 aa14.28□□□□□ -0.12
COL1A1-201ENST00000225964 NKX1-1Q15270 411 aaPredicted RBP14.28□□□□□ -0.12
COL1A1-201ENST00000225964 ZNF713Q8N859 430 aaPredicted RBP14.28□□□□□ -0.12
COL1A1-201ENST00000225964 PDCD6IPQ8WUM4 868 aaKnown RBP14.28□□□□□ -0.12
COL1A1-201ENST00000225964 PIM2Q9P1W9 311 aa14.28□□□□□ -0.12
COL1A1-201ENST00000225964 CYP2D7A0A087X1C5 515 aa14.27□□□□□ -0.12
COL1A1-201ENST00000225964 PTPN21Q16825 1174 aa14.27□□□□□ -0.12
COL1A1-201ENST00000225964 SLC27A3Q5K4L6 730 aa14.27□□□□□ -0.12
COL1A1-201ENST00000225964 PCGF5Q86SE9 256 aa14.27□□□□□ -0.12
COL1A1-201ENST00000225964 MASTLQ96GX5 879 aa14.27□□□□□ -0.12
COL1A1-201ENST00000225964 XAB2Q9HCS7 855 aaKnown RBP14.27□□□□□ -0.12
COL1A1-201ENST00000225964 MTMR6Q9Y217 621 aa14.27□□□□□ -0.12
COL1A1-201ENST00000225964 TRAPPC10P48553 1259 aa14.27□□□□□ -0.12
COL1A1-201ENST00000225964 AFG1LQ8WV93 481 aa14.27□□□□□ -0.12
COL1A1-201ENST00000225964 APOEP02649 317 aa14.27□□□□□ -0.12
COL1A1-201ENST00000225964 PLS3P13797 630 aa14.27□□□□□ -0.12
COL1A1-201ENST00000225964 GRAPQ13588 217 aa14.27□□□□□ -0.12
COL1A1-201ENST00000225964 KCTD16Q68DU8 428 aa14.27□□□□□ -0.12
COL1A1-201ENST00000225964 GRAPLQ8TC17 118 aaPredicted RBP14.27□□□□□ -0.12
COL1A1-201ENST00000225964 IFT43Q96FT9 208 aa14.27□□□□□ -0.12
COL1A1-201ENST00000225964 TBK1Q9UHD2 729 aa14.27□□□□□ -0.12
COL1A1-201ENST00000225964 CDK8P49336 464 aa14.27□□□□□ -0.13
COL1A1-201ENST00000225964 PEX3P56589 373 aa14.27□□□□□ -0.13
COL1A1-201ENST00000225964 MAN2A1Q16706 1144 aa14.27□□□□□ -0.13
COL1A1-201ENST00000225964 SNX19Q92543 992 aa14.27□□□□□ -0.13
COL1A1-201ENST00000225964 INTS9Q9NV88 658 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms