RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 UBN2Q6ZU65 1347 aa12.52□□□□□ -0.41
NOD1-201ENST00000222823 NWD1Q149M9 1564 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 SH3BP5O60239 455 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 TROVE2P10155 538 aaKnown RBP eCLIP12.51□□□□□ -0.41
NOD1-201ENST00000222823 ATF2P15336 505 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 GABPAQ06546 454 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 KAZNQ674X7 775 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 DPP9Q86TI2 863 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 FAM133AQ8N9E0 248 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 ZNF653Q96CK0 615 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 RILPQ96NA2 401 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 PCDHB4Q9Y5E5 795 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 SOWAHDA6NJG2 315 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 NDUFA10O95299 355 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 CNGA1P29973 690 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 EIF4A3P38919 411 aaKnown RBP12.51□□□□□ -0.41
NOD1-201ENST00000222823 ANTXR2P58335 489 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 LRRC63Q05C16 580 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 NAA25Q14CX7 972 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 TMED8Q6PL24 325 aaPredicted RBP12.51□□□□□ -0.41
NOD1-201ENST00000222823 TMEM179Q6ZVK1 233 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 FAM160B2Q86V87 743 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 MAP7D3Q8IWC1 876 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 BBOF1Q8ND07 529 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 SH3RF3Q8TEJ3 882 aaPredicted RBP12.51□□□□□ -0.41
NOD1-201ENST00000222823 TMEM47Q9BQJ4 181 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 PDE11AQ9HCR9 933 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 HAUS2Q9NVX0 235 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 MXI1P50539 228 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 PDZD4Q76G19 769 aaPredicted RBP12.51□□□□□ -0.41
NOD1-201ENST00000222823 FAM71BQ8TC56 605 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 CAPS2Q9BXY5 557 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 CD209Q9NNX6 404 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 KLHL14Q9P2G3 628 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 PLEKHG2Q9H7P9 1386 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 GH2P01242 217 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 HOXA13P31271 388 aaPredicted RBP12.51□□□□□ -0.41
NOD1-201ENST00000222823 GBP1P32455 592 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 APBA1Q02410 837 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 SEPT14Q6ZU15 432 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 SESTD1Q86VW0 696 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 DCP1AQ9NPI6 582 aaPredicted RBP12.51□□□□□ -0.41
NOD1-201ENST00000222823 GCNT4Q9P109 453 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 DAAM1Q9Y4D1 1078 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 AFG3L2Q9Y4W6 797 aa12.51□□□□□ -0.41
NOD1-201ENST00000222823 A0A0G2JLW4 131 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 GSG1L2A8MUP6 293 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 GFPT2O94808 682 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 ASNSP08243 561 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 RXRBP28702 533 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 HOXA7P31268 230 aaPredicted RBP12.5□□□□□ -0.41
NOD1-201ENST00000222823 KRT31Q15323 416 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 CCDC13Q8IYE1 715 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 TAB3Q8N5C8 712 aaPredicted RBP12.5□□□□□ -0.41
NOD1-201ENST00000222823 RUNDC3BQ96NL0 473 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 SH3GLB2Q9NR46 395 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 GDAQ9Y2T3 454 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 HEXIM1O94992 359 aaKnown RBP12.5□□□□□ -0.41
NOD1-201ENST00000222823 EIF2AK2P19525 551 aaKnown RBP12.5□□□□□ -0.41
NOD1-201ENST00000222823 CACNB3P54284 484 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 PSMD6Q15008 389 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 ZNF772Q68DY9 489 aaPredicted RBP12.5□□□□□ -0.41
NOD1-201ENST00000222823 SHC4Q6S5L8 630 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 ENAHQ8N8S7 591 aaPredicted RBP12.5□□□□□ -0.41
NOD1-201ENST00000222823 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.5□□□□□ -0.41
NOD1-201ENST00000222823 PODXL2Q9NZ53 605 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 JRKLQ9Y4A0 524 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 NUB1Q9Y5A7 615 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 A0A1B0GUA9 196 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 ZMYND10O75800 440 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 MAPK4P31152 587 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 RASSF2P50749 326 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 PNPLA7Q6ZV29 1317 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 MASTLQ96GX5 879 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 BEGAINQ9BUH8 593 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 PPP1R12CQ9BZL4 782 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 CPVLQ9H3G5 476 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 EPB41L5Q9HCM4 733 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 RNF14Q9UBS8 474 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 BAIAP2L1Q9UHR4 511 aa12.5□□□□□ -0.41
NOD1-201ENST00000222823 PGRMC1O00264 195 aaKnown RBP12.49□□□□□ -0.41
NOD1-201ENST00000222823 CXCR5P32302 372 aa12.49□□□□□ -0.41
NOD1-201ENST00000222823 LLGL1Q15334 1064 aa12.49□□□□□ -0.41
NOD1-201ENST00000222823 PFKFB3Q16875 520 aaPredicted RBP12.49□□□□□ -0.41
NOD1-201ENST00000222823 PANX2Q96RD6 677 aa12.49□□□□□ -0.41
NOD1-201ENST00000222823 ADAMTS1Q9UHI8 967 aa12.49□□□□□ -0.41
NOD1-201ENST00000222823 DCCP43146 1447 aa12.49□□□□□ -0.41
NOD1-201ENST00000222823 H7C0C1 242 aa12.49□□□□□ -0.41
NOD1-201ENST00000222823 XPOTO43592 962 aaKnown RBP12.49□□□□□ -0.41
NOD1-201ENST00000222823 ATP5OP48047 213 aa12.49□□□□□ -0.41
NOD1-201ENST00000222823 KCTD16Q68DU8 428 aa12.49□□□□□ -0.41
NOD1-201ENST00000222823 CIAPIN1Q6FI81 312 aa12.49□□□□□ -0.41
NOD1-201ENST00000222823 FBXL16Q8N461 479 aa12.49□□□□□ -0.41
NOD1-201ENST00000222823 TTLL6Q8N841 843 aa12.49□□□□□ -0.41
NOD1-201ENST00000222823 SLC44A5Q8NCS7 719 aa12.49□□□□□ -0.41
NOD1-201ENST00000222823 FAM149B1Q96BN6 582 aa12.49□□□□□ -0.41
NOD1-201ENST00000222823 TRIM11Q96F44 468 aa12.49□□□□□ -0.41
NOD1-201ENST00000222823 NHEJ1Q9H9Q4 299 aaPredicted RBP12.49□□□□□ -0.41
NOD1-201ENST00000222823 ZNF277Q9NRM2 450 aaPredicted RBP12.49□□□□□ -0.41
NOD1-201ENST00000222823 CD2APQ9Y5K6 639 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms