RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Arhgap44Q5SSM3 814 aa7.77□□□□□ -1.16
Chm-202ENSMUST00000113388 Xlr3cQ61806 226 aa7.77□□□□□ -1.16
Chm-202ENSMUST00000113388 Ythdf3Q8BYK6 585 aaKnown RBP7.77□□□□□ -1.16
Chm-202ENSMUST00000113388 Commd10Q8JZY2 202 aa7.77□□□□□ -1.16
Chm-202ENSMUST00000113388 Slc14a2Q8R4T9 930 aa7.77□□□□□ -1.16
Chm-202ENSMUST00000113388 Rpa1Q8VEE4 623 aaKnown RBP7.77□□□□□ -1.16
Chm-202ENSMUST00000113388 HnrnprQ8VHM5 632 aaKnown RBP7.77□□□□□ -1.16
Chm-202ENSMUST00000113388 Ndufa5Q9CPP6 116 aa7.77□□□□□ -1.16
Chm-202ENSMUST00000113388 Wars2Q9CYK1 360 aa7.77□□□□□ -1.16
Chm-202ENSMUST00000113388 Capn15Q9JLG8 1095 aa7.77□□□□□ -1.16
Chm-202ENSMUST00000113388 GgcxQ9QYC7 757 aa7.77□□□□□ -1.16
Chm-202ENSMUST00000113388 Lgr5Q9Z1P4 907 aa7.77□□□□□ -1.16
Chm-202ENSMUST00000113388 Nr1i3O35627 358 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Chmp6P0C0A3 200 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Ctnna1P26231 906 aaKnown RBP7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Eps15P42567 897 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Pla2g4aP47713 748 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Rrp1P56183 494 aaKnown RBP7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Rps8P62242 208 aaKnown RBP7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Tuba4aP68368 448 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Trmt1Q3TX08 663 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Washc4Q3UMB9 1173 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 HellsQ60848 821 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Ifit2Q64112 472 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Stx3Q64704 289 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Scaf8Q6DID3 1268 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Ddx10Q80Y44 875 aaKnown RBP7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Ublcp1Q8BGR9 318 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Tigd4Q8BUZ3 513 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Abcg4Q91WA9 646 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 AdarQ99MU3 1178 aaKnown RBP7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Eif4enif1Q9EST3 983 aaKnown RBP7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Kcnh3Q9WVJ0 1095 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Setdb1O88974 1307 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Ifit3bE9PV48 403 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Gnai2P08752 355 aaKnown RBP7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Ets1P27577 440 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Trmt10cQ3UFY8 414 aaKnown RBP7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Trim21Q62191 470 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Tpd52Q62393 224 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Krt12Q64291 487 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Tbc1d5Q80XQ2 815 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Ddhd1Q80YA3 547 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Kcns3Q8BQZ8 491 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Ppme1Q8BVQ5 386 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Sept8Q8CHH9 429 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Retreg1dQ8VE91 480 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Atp5dQ9D3D9 168 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 TcimQ9D915 106 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Sil1Q9EPK6 465 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Ndufa13Q9ERS2 144 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 MefvQ9JJ26 767 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Ptf1aQ9QX98 324 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Krt71Q9R0H5 524 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 PygmQ9WUB3 842 aaKnown RBP7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Gm6685D3YYP3 228 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Kctd21Q3URF8 260 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Ticam2Q8BJQ4 232 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Edc3Q8K2D3 508 aaKnown RBP7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Tubb6Q922F4 447 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Cd97Q9Z0M6 818 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Cyp2ab1S4R196 498 aa7.77□□□□□ -1.17
Chm-202ENSMUST00000113388 Pfkfb3A7UAK5 555 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 BC035947B2RQY6 695 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 HpdP49429 393 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Palb2Q3U0P1 1104 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Lrrc8bQ5DU41 803 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 JrkQ60976 557 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Itih2Q61703 946 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Arhgap10Q6Y5D8 786 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 AbraQ8BUZ1 375 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Slc39a11Q8BWY7 342 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Fam192aQ91WE2 254 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 GatbQ99JT1 557 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Nsmce3Q9CPR8 279 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Spc24Q9D083 201 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Ubxn11Q9D572 484 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Ankle1A8VU90 534 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Gm28043E0CXC2 719 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Raph1F2Z3U3 1266 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Sept2P42208 361 aaKnown RBP7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Patl1Q3TC46 770 aaKnown RBP7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Atp4aQ64436 1033 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Ppp1r42Q8R1Z4 357 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Pglyrp2Q8VCS0 530 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Rnf34Q99KR6 376 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Fam84aQ9D650 292 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Pdcd6ipQ9WU78 869 aaKnown RBP7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Stk39Q9Z1W9 556 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 MtrA6H5Y3 1253 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Vwa3bJ9JI28 736 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Smarcad1Q04692 1021 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Psd3Q2PFD7 1037 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Prickle1Q3U5C7 832 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Atp2b4Q6Q477 1205 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Tmem143Q8VD26 458 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Taf12Q8VE65 161 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Eif2b2Q99LD9 351 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Mcur1Q9CXD6 340 aa7.76□□□□□ -1.17
Chm-202ENSMUST00000113388 Dydc2Q9D3X8 139 aa7.76□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms