RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 PTPAQ15257 358 aa18.13■□□□□ 0.49
SCARB2-210ENST00000638567 FAM83BQ5T0W9 1011 aa18.13■□□□□ 0.49
SCARB2-210ENST00000638567 CEP63Q96MT8 703 aa18.13■□□□□ 0.49
SCARB2-210ENST00000638567 PCIF1Q9H4Z3 704 aa18.13■□□□□ 0.49
SCARB2-210ENST00000638567 TRIM10Q9UDY6 481 aa18.13■□□□□ 0.49
SCARB2-210ENST00000638567 CAPN11Q9UMQ6 739 aa18.13■□□□□ 0.49
SCARB2-210ENST00000638567 ZBED4O75132 1171 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 ATF7P17544 494 aaPredicted RBP18.12■□□□□ 0.49
SCARB2-210ENST00000638567 GAP43P17677 238 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 GRM4Q14833 912 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 CCDC13Q8IYE1 715 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 CEP95Q96GE4 821 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 PPP1R12CQ9BZL4 782 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 FAM169AQ9Y6X4 670 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 E9PMD0 336 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 SERPINB2P05120 415 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 REXO1L1PQ8IX06 675 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 COG1Q8WTW3 980 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 MMS19Q96T76 1030 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 ANO3Q9BYT9 981 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 SFI1A8K8P3 1242 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 ORC4O43929 436 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 CYP2C19P33261 490 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 ANKRD40Q6AI12 368 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 CCDC197Q8NCU1 140 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 GYPCP04921 128 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 GRAPQ13588 217 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 NEDD9Q14511 834 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 GRAPLQ8TC17 118 aaPredicted RBP18.12■□□□□ 0.49
SCARB2-210ENST00000638567 CEP72Q9P209 647 aa18.12■□□□□ 0.49
SCARB2-210ENST00000638567 BBOX1O75936 387 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 ZNF653Q96CK0 615 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 RUNDC3BQ96NL0 473 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 FMO2Q99518 471 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 MYO1FO00160 1098 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 E2F4Q16254 413 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 C10orf76Q5T2E6 689 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 ADSSL1Q8N142 457 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 CCDC89Q8N998 374 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 TRIM9Q9C026 710 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 FRMPD1Q5SYB0 1578 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 USP17L15C9J2P7 530 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 USP17L13C9JLJ4 530 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 USP17L11C9JVI0 530 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 USP17L18D6R9N7 530 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 USP17L22D6RA61 530 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 USP17L17D6RBQ6 530 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 USP17L19D6RCP7 530 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 USP17L20D6RJB6 530 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 KRT19P08727 400 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 ATF2P15336 505 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 NT5C2P49902 561 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 ADCY1Q08828 1119 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 USP17L24Q0WX57 530 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 CDC37Q16543 378 aaPredicted RBP18.11■□□□□ 0.49
SCARB2-210ENST00000638567 USP17L6PQ6QN14 398 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 OTUD6AQ7L8S5 288 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 ZNF577Q9BSK1 485 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 AGPAT5Q9NUQ2 364 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 VWDEQ8N2E2 1590 aa18.11■□□□□ 0.49
SCARB2-210ENST00000638567 TDP2O95551 362 aa18.1■□□□□ 0.49
SCARB2-210ENST00000638567 HOXA13P31271 388 aaPredicted RBP18.1■□□□□ 0.49
SCARB2-210ENST00000638567 ZKSCAN8Q15776 578 aaPredicted RBP18.1■□□□□ 0.49
SCARB2-210ENST00000638567 ANKRD20A3Q5VUR7 823 aa18.1■□□□□ 0.49
SCARB2-210ENST00000638567 GUF1Q8N442 669 aaKnown RBP18.1■□□□□ 0.49
SCARB2-210ENST00000638567 PICK1Q9NRD5 415 aa18.1■□□□□ 0.49
SCARB2-210ENST00000638567 TECPR2O15040 1411 aa18.1■□□□□ 0.49
SCARB2-210ENST00000638567 CLTCQ00610 1675 aaKnown RBP18.1■□□□□ 0.49
SCARB2-210ENST00000638567 ZNF185O15231 689 aa18.1■□□□□ 0.49
SCARB2-210ENST00000638567 FGGP02679 453 aa18.1■□□□□ 0.49
SCARB2-210ENST00000638567 KCNB1Q14721 858 aa18.1■□□□□ 0.49
SCARB2-210ENST00000638567 GLE1Q53GS7 698 aaKnown RBP18.1■□□□□ 0.49
SCARB2-210ENST00000638567 VPS52Q8N1B4 723 aa18.1■□□□□ 0.49
SCARB2-210ENST00000638567 SPATA4Q8NEY3 305 aa18.1■□□□□ 0.49
SCARB2-210ENST00000638567 GRK7Q8WTQ7 553 aa18.1■□□□□ 0.49
SCARB2-210ENST00000638567 PARVGQ9HBI0 331 aa18.1■□□□□ 0.49
SCARB2-210ENST00000638567 PLAAQ9Y263 795 aa18.1■□□□□ 0.49
SCARB2-210ENST00000638567 CCDC160A6NGH7 325 aa18.1■□□□□ 0.49
SCARB2-210ENST00000638567 MAGEA9P43362 315 aa18.1■□□□□ 0.49
SCARB2-210ENST00000638567 LIG4P49917 911 aa18.1■□□□□ 0.49
SCARB2-210ENST00000638567 SNAP25P60880 206 aa18.1■□□□□ 0.49
SCARB2-210ENST00000638567 POMGNT1Q8WZA1 660 aa18.1■□□□□ 0.49
SCARB2-210ENST00000638567 ZNF512BQ96KM6 892 aaPredicted RBP18.1■□□□□ 0.49
SCARB2-210ENST00000638567 DBNDD1Q9H9R9 158 aa18.1■□□□□ 0.49
SCARB2-210ENST00000638567 ZNF148Q9UQR1 794 aa18.1■□□□□ 0.49
SCARB2-210ENST00000638567 CD2APQ9Y5K6 639 aa18.1■□□□□ 0.49
SCARB2-210ENST00000638567 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.09■□□□□ 0.49
SCARB2-210ENST00000638567 BMP3P12645 472 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 GBP1P32455 592 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 NSFP46459 744 aaKnown RBP18.09■□□□□ 0.49
SCARB2-210ENST00000638567 KCNH2Q12809 1159 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 COASYQ13057 564 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 SNX1Q13596 522 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 PROM2Q8N271 834 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 TAB3Q8N5C8 712 aaPredicted RBP18.09■□□□□ 0.49
SCARB2-210ENST00000638567 RAD54LQ92698 747 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 NT5C1BQ96P26 610 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 CSRNP1Q96S65 589 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 PACSIN2Q9UNF0 486 aaPredicted RBP18.09■□□□□ 0.49
SCARB2-210ENST00000638567 SORBS3O60504 671 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms