RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	UTP11	Q9Y3A2	253 aa	Known RBP	12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	COL4A3BP	Q9Y5P4	624 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	NFS1	Q9Y697	457 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ATAD5	Q96QE3	1844 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	KIAA1551	Q9HCM1	1747 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	FLT1	P17948	1338 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	MAST2	Q6P0Q8	1798 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	BUB1B	O60566	1050 aa	Predicted RBP	12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ATP5H	O75947	161 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	WFS1	O76024	890 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	AGT	P01019	485 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	GLI1	P08151	1106 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CARS	P49589	748 aa	Known RBP	12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CCNG1	P51959	295 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	EHHADH	Q08426	723 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ADCY2	Q08462	1091 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	TCEAL1	Q15170	157 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	EARS2	Q5JPH6	523 aa	Known RBP	12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	SPDYA	Q5MJ70	313 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ERMARD	Q5T6L9	678 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	NFRKB	Q6P4R8	1299 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	RRAGA	Q7L523	313 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CPLX4	Q7Z7G2	160 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	SLFN11	Q7Z7L1	901 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	NEK8	Q86SG6	692 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	COL23A1	Q86Y22	540 aa	Predicted RBP	12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	TEX9	Q8N6V9	391 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CCT6B	Q92526	530 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	TLCD1	Q96CP7	247 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	TAOK3	Q9H2K8	898 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	MKNK2	Q9HBH9	465 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	METTL14	Q9HCE5	456 aa	Known RBP	12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	DDX20	Q9UHI6	824 aa	Known RBP	12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	PITPNM2	Q9BZ72	1349 aa		12.87	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	LAMB1	P07942	1786 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	TRIM49B	A6NDI0	452 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CCT8L1P	A6NM43	557 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	LRRC53	A6NM62	1247 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	PODXL	O00592	558 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	PPFIA2	O75334	1257 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	KIF4A	O95239	1232 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	PLEKHA8P1	O95397	391 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	KRT14	P02533	472 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	PLCG1	P19174	1290 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	RFX1	P22670	979 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CCND1	P24385	295 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	HSD17B3	P37058	310 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	SCTR	P47872	440 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	PMS1	P54277	932 aa	Known RBP	12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CYP27A1	Q02318	531 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ZNF268	Q14587	947 aa	Predicted RBP	12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ODF2	Q5BJF6	829 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	HYI	Q5T013	277 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	MYOCD	Q8IZQ8	938 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	SH3TC2	Q8TF17	1288 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CASKIN2	Q8WXE0	1202 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CUL5	Q93034	780 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	GRAMD1A	Q96CP6	724 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	RRP36	Q96EU6	259 aa	Known RBP	12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CDK5RAP3	Q96JB5	506 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	MMRN2	Q9H8L6	949 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	SAMD15	Q9P1V8	674 aa		12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	NOC2L	Q9Y3T9	749 aa	Known RBP	12.86	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	MINDY4B	A8MYZ0	360 aa		12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	PPIP5K2	O43314	1243 aa		12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ZMYND10	O75800	440 aa		12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ALAD	P13716	330 aa		12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	PDE6C	P51160	858 aa		12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	HADHB	P55084	474 aa	Known RBP	12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	GUCY1A3	Q02108	690 aa		12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ZNF844	Q08AG5	666 aa		12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ASIC2	Q16515	512 aa		12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	TDRD12	Q587J7	1177 aa	Known RBP	12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	FAM83B	Q5T0W9	1011 aa		12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	BICDL1	Q6ZP65	573 aa		12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	LRRC55	Q6ZSA7	311 aa		12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	FRMD5	Q7Z6J6	570 aa		12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	PROSER2	Q86WR7	435 aa	Predicted RBP	12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	HDAC7	Q8WUI4	952 aa		12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	LARP4B	Q92615	738 aa	Known RBP	12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	N4BP2L2	Q92802	583 aa	Predicted RBP	12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	SHISA4	Q96DD7	197 aa		12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CARD9	Q9H257	536 aa		12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	RNF216	Q9NWF9	866 aa	Predicted RBP	12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	NOP53	Q9NZM5	478 aa	Known RBP	12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	PCDHA6	Q9UN73	950 aa		12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	SLC12A4	Q9UP95	1085 aa		12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	SAMM50	Q9Y512	469 aa		12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	PCDHA8	Q9Y5H6	950 aa		12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	TACC3	Q9Y6A5	838 aa		12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	COL5A2	P05997	1499 aa	Predicted RBP	12.85	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CASZ1	Q86V15	1759 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	FAM205C	A6NFA0	338 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	MYO1F	O00160	1098 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	HNRNPCL1	O60812	293 aa	Known RBP	12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	PALM	O75781	387 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CASP1	P29466	404 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	MMP13	P45452	471 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	SH3BGR	P55822	239 aa	Predicted RBP	12.84	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms