RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 MOXD1Q6UVY6 613 aa21.41■■□□□ 1.02
CCDC9-205ENST00000600117 NIPA1Q7RTP0 329 aa21.41■■□□□ 1.02
CCDC9-205ENST00000600117 SCFD2Q8WU76 684 aa21.41■■□□□ 1.02
CCDC9-205ENST00000600117 BADQ92934 168 aa21.41■■□□□ 1.02
CCDC9-205ENST00000600117 LENG9Q96B70 501 aa21.41■■□□□ 1.02
CCDC9-205ENST00000600117 GPRASP2Q96D09 838 aa21.41■■□□□ 1.02
CCDC9-205ENST00000600117 WDR11Q9BZH6 1224 aa21.41■■□□□ 1.02
CCDC9-205ENST00000600117 PRDM5Q9NQX1 630 aaPredicted RBP21.41■■□□□ 1.02
CCDC9-205ENST00000600117 FAM184BQ9ULE4 1060 aa21.41■■□□□ 1.02
CCDC9-205ENST00000600117 SPATA31C2B4DYI2 1134 aa21.4■■□□□ 1.02
CCDC9-205ENST00000600117 PDIA4P13667 645 aaKnown RBP21.4■■□□□ 1.02
CCDC9-205ENST00000600117 ZNF76P36508 570 aa21.4■■□□□ 1.02
CCDC9-205ENST00000600117 LETM2Q2VYF4 491 aa21.4■■□□□ 1.02
CCDC9-205ENST00000600117 GNPTABQ3T906 1256 aa21.4■■□□□ 1.02
CCDC9-205ENST00000600117 IQSEC1Q6DN90 963 aa21.4■■□□□ 1.02
CCDC9-205ENST00000600117 NLRX1Q86UT6 975 aa21.4■■□□□ 1.02
CCDC9-205ENST00000600117 FERMT3Q86UX7 667 aa21.4■■□□□ 1.02
CCDC9-205ENST00000600117 CHD9Q3L8U1 2897 aa21.39■■□□□ 1.02
CCDC9-205ENST00000600117 KBTBD13C9JR72 458 aa21.39■■□□□ 1.01
CCDC9-205ENST00000600117 FIBPO43427 364 aa21.39■■□□□ 1.01
CCDC9-205ENST00000600117 ARP10275 920 aa21.39■■□□□ 1.01
CCDC9-205ENST00000600117 AKR1A1P14550 325 aa21.39■■□□□ 1.01
CCDC9-205ENST00000600117 SMPD1P17405 629 aa21.39■■□□□ 1.01
CCDC9-205ENST00000600117 TOB1P50616 345 aaPredicted RBP21.39■■□□□ 1.01
CCDC9-205ENST00000600117 PPP4R3AQ6IN85 833 aa21.39■■□□□ 1.01
CCDC9-205ENST00000600117 PLA2G4DQ86XP0 818 aa21.39■■□□□ 1.01
CCDC9-205ENST00000600117 LENG1Q96BZ8 264 aaPredicted RBP21.39■■□□□ 1.01
CCDC9-205ENST00000600117 PDLIM7Q9NR12 457 aa21.39■■□□□ 1.01
CCDC9-205ENST00000600117 DDX41Q9UJV9 622 aaKnown RBP21.39■■□□□ 1.01
CCDC9-205ENST00000600117 TGFB3P10600 412 aa21.38■■□□□ 1.01
CCDC9-205ENST00000600117 GCFC2P16383 781 aaKnown RBP21.38■■□□□ 1.01
CCDC9-205ENST00000600117 COL9A1P20849 921 aa21.38■■□□□ 1.01
CCDC9-205ENST00000600117 PTGS1P23219 599 aa21.38■■□□□ 1.01
CCDC9-205ENST00000600117 TRAPPC10P48553 1259 aa21.38■■□□□ 1.01
CCDC9-205ENST00000600117 SP2Q02086 613 aa21.38■■□□□ 1.01
CCDC9-205ENST00000600117 TNFAIP2Q03169 654 aa21.38■■□□□ 1.01
CCDC9-205ENST00000600117 MTMR1Q13613 665 aa21.38■■□□□ 1.01
CCDC9-205ENST00000600117 TTLL4Q14679 1199 aa21.38■■□□□ 1.01
CCDC9-205ENST00000600117 TRIM60Q495X7 471 aa21.38■■□□□ 1.01
CCDC9-205ENST00000600117 Q4G0T1 1027 aa21.38■■□□□ 1.01
CCDC9-205ENST00000600117 DUSP28Q4G0W2 176 aa21.38■■□□□ 1.01
CCDC9-205ENST00000600117 TJAP1Q5JTD0 557 aa21.38■■□□□ 1.01
CCDC9-205ENST00000600117 BRAPQ7Z569 592 aa21.38■■□□□ 1.01
CCDC9-205ENST00000600117 KCNH7Q9NS40 1196 aa21.38■■□□□ 1.01
CCDC9-205ENST00000600117 GNEQ9Y223 722 aaKnown RBP21.38■■□□□ 1.01
CCDC9-205ENST00000600117 ZDHHC9Q9Y397 364 aa21.38■■□□□ 1.01
CCDC9-205ENST00000600117 MRVI1Q9Y6F6 885 aa21.38■■□□□ 1.01
CCDC9-205ENST00000600117 MYO9BQ13459 2157 aa21.38■■□□□ 1.01
CCDC9-205ENST00000600117 MAFGO15525 162 aa21.37■■□□□ 1.01
CCDC9-205ENST00000600117 SLC37A4O43826 429 aa21.37■■□□□ 1.01
CCDC9-205ENST00000600117 ZSCAN22P10073 491 aaPredicted RBP21.37■■□□□ 1.01
CCDC9-205ENST00000600117 TXNP10599 105 aaKnown RBP21.37■■□□□ 1.01
CCDC9-205ENST00000600117 LY6KQ17RY6 165 aa21.37■■□□□ 1.01
CCDC9-205ENST00000600117 PRR16Q569H4 304 aa21.37■■□□□ 1.01
CCDC9-205ENST00000600117 C1orf53Q5VUE5 145 aa21.37■■□□□ 1.01
CCDC9-205ENST00000600117 ANO1Q5XXA6 986 aa21.37■■□□□ 1.01
CCDC9-205ENST00000600117 KCNV1Q6PIU1 500 aa21.37■■□□□ 1.01
CCDC9-205ENST00000600117 COPS5Q92905 334 aa21.37■■□□□ 1.01
CCDC9-205ENST00000600117 CDHR1Q96JP9 859 aa21.37■■□□□ 1.01
CCDC9-205ENST00000600117 CCNT1O60563 726 aaKnown RBP21.36■■□□□ 1.01
CCDC9-205ENST00000600117 ATP9AO75110 1047 aa21.36■■□□□ 1.01
CCDC9-205ENST00000600117 BRD1O95696 1058 aa21.36■■□□□ 1.01
CCDC9-205ENST00000600117 KCNA2P16389 499 aa21.36■■□□□ 1.01
CCDC9-205ENST00000600117 ATP2B1P20020 1258 aa21.36■■□□□ 1.01
CCDC9-205ENST00000600117 UBA1P22314 1058 aaKnown RBP21.36■■□□□ 1.01
CCDC9-205ENST00000600117 SETQ01105 290 aaPredicted RBP21.36■■□□□ 1.01
CCDC9-205ENST00000600117 NBR1Q14596 966 aa21.36■■□□□ 1.01
CCDC9-205ENST00000600117 TTC38Q5R3I4 469 aa21.36■■□□□ 1.01
CCDC9-205ENST00000600117 MYSM1Q5VVJ2 828 aa21.36■■□□□ 1.01
CCDC9-205ENST00000600117 NAP1L4Q99733 375 aaKnown RBP21.36■■□□□ 1.01
CCDC9-205ENST00000600117 ZSCAN16Q9H4T2 348 aaPredicted RBP21.36■■□□□ 1.01
CCDC9-205ENST00000600117 BCAS3Q9H6U6 928 aa21.36■■□□□ 1.01
CCDC9-205ENST00000600117 AGO4Q9HCK5 861 aaKnown RBP21.36■■□□□ 1.01
CCDC9-205ENST00000600117 DDX25Q9UHL0 483 aaKnown RBP21.36■■□□□ 1.01
CCDC9-205ENST00000600117 NOL7Q9UMY1 257 aaKnown RBP21.36■■□□□ 1.01
CCDC9-205ENST00000600117 TRIM43BA6NCK2 446 aa21.35■■□□□ 1.01
CCDC9-205ENST00000600117 TNFRSF10AO00220 468 aa21.35■■□□□ 1.01
CCDC9-205ENST00000600117 NKRFO15226 690 aaKnown RBP eCLIP21.35■■□□□ 1.01
CCDC9-205ENST00000600117 MSH4O15457 936 aa21.35■■□□□ 1.01
CCDC9-205ENST00000600117 DUSP11O75319 330 aaKnown RBP21.35■■□□□ 1.01
CCDC9-205ENST00000600117 F13A1P00488 732 aa21.35■■□□□ 1.01
CCDC9-205ENST00000600117 RILPL1Q5EBL4 403 aa21.35■■□□□ 1.01
CCDC9-205ENST00000600117 FOXD4L5Q5VV16 416 aaPredicted RBP21.35■■□□□ 1.01
CCDC9-205ENST00000600117 SH3RF1Q7Z6J0 888 aa21.35■■□□□ 1.01
CCDC9-205ENST00000600117 FOXD4L4Q8WXT5 416 aaPredicted RBP21.35■■□□□ 1.01
CCDC9-205ENST00000600117 TRIM43Q96BQ3 446 aaPredicted RBP21.35■■□□□ 1.01
CCDC9-205ENST00000600117 SENP7Q9BQF6 1050 aa21.35■■□□□ 1.01
CCDC9-205ENST00000600117 DAXXQ9UER7 740 aaPredicted RBP21.35■■□□□ 1.01
CCDC9-205ENST00000600117 DOCK5Q9H7D0 1870 aa21.35■■□□□ 1.01
CCDC9-205ENST00000600117 ARHGAP1Q07960 439 aa21.34■■□□□ 1.01
CCDC9-205ENST00000600117 ITGB3BPQ13352 177 aaPredicted RBP21.34■■□□□ 1.01
CCDC9-205ENST00000600117 FAM173BQ6P4H8 233 aa21.34■■□□□ 1.01
CCDC9-205ENST00000600117 POTEDQ86YR6 584 aa21.34■■□□□ 1.01
CCDC9-205ENST00000600117 ETNPPLQ8TBG4 499 aa21.34■■□□□ 1.01
CCDC9-205ENST00000600117 RNPC3Q96LT9 517 aaKnown RBP21.34■■□□□ 1.01
CCDC9-205ENST00000600117 IPO9Q96P70 1041 aaKnown RBP21.34■■□□□ 1.01
CCDC9-205ENST00000600117 UPF3AQ9H1J1 476 aaKnown RBP21.34■■□□□ 1.01
CCDC9-205ENST00000600117 KCNMB3Q9NPA1 279 aa21.34■■□□□ 1.01
CCDC9-205ENST00000600117 PKD2L1Q9P0L9 805 aa21.34■■□□□ 1.01
CCDC9-205ENST00000600117 Q9Y3F1 56 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms