RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 C17orf80Q9BSJ5 609 aa10.19□□□□□ -0.78
SMAD4-215ENST00000592911 PLVAPQ9BX97 442 aa10.19□□□□□ -0.78
SMAD4-215ENST00000592911 HDAC6Q9UBN7 1215 aa10.19□□□□□ -0.78
SMAD4-215ENST00000592911 DDX41Q9UJV9 622 aaKnown RBP10.19□□□□□ -0.78
SMAD4-215ENST00000592911 RSPH10B2B2RC85 870 aa10.18□□□□□ -0.78
SMAD4-215ENST00000592911 RSPH10BP0C881 870 aa10.18□□□□□ -0.78
SMAD4-215ENST00000592911 GNAT1P11488 350 aa10.18□□□□□ -0.78
SMAD4-215ENST00000592911 TRAF1Q13077 416 aa10.18□□□□□ -0.78
SMAD4-215ENST00000592911 GPM6BQ13491 265 aa10.18□□□□□ -0.78
SMAD4-215ENST00000592911 TCEAL5Q5H9L2 206 aa10.18□□□□□ -0.78
SMAD4-215ENST00000592911 ZNF618Q5T7W0 954 aa10.18□□□□□ -0.78
SMAD4-215ENST00000592911 HFE2Q6ZVN8 426 aa10.18□□□□□ -0.78
SMAD4-215ENST00000592911 MYOCDQ8IZQ8 938 aa10.18□□□□□ -0.78
SMAD4-215ENST00000592911 COPS5Q92905 334 aa10.18□□□□□ -0.78
SMAD4-215ENST00000592911 CLP1Q92989 425 aaKnown RBP10.18□□□□□ -0.78
SMAD4-215ENST00000592911 DCTPP1Q9H773 170 aa10.18□□□□□ -0.78
SMAD4-215ENST00000592911 MTUS1Q9ULD2 1270 aa10.18□□□□□ -0.78
SMAD4-215ENST00000592911 DDX49Q9Y6V7 483 aaKnown RBP10.18□□□□□ -0.78
SMAD4-215ENST00000592911 KMT2EQ8IZD2 1858 aa10.18□□□□□ -0.78
SMAD4-215ENST00000592911 CFAP54Q96N23 3096 aa10.18□□□□□ -0.78
SMAD4-215ENST00000592911 C5orf42Q9H799 3197 aa10.18□□□□□ -0.78
SMAD4-215ENST00000592911 EYA4O95677 639 aa10.17□□□□□ -0.78
SMAD4-215ENST00000592911 IRS1P35568 1242 aa10.17□□□□□ -0.78
SMAD4-215ENST00000592911 SNAP25P60880 206 aa10.17□□□□□ -0.78
SMAD4-215ENST00000592911 MBTPS1Q14703 1052 aa10.17□□□□□ -0.78
SMAD4-215ENST00000592911 PPP1R15BQ5SWA1 713 aa10.17□□□□□ -0.78
SMAD4-215ENST00000592911 TTBK2Q6IQ55 1244 aa10.17□□□□□ -0.78
SMAD4-215ENST00000592911 RPAINQ86UA6 219 aa10.17□□□□□ -0.78
SMAD4-215ENST00000592911 DGKHQ86XP1 1220 aa10.17□□□□□ -0.78
SMAD4-215ENST00000592911 DBF4BQ8NFT6 615 aa10.17□□□□□ -0.78
SMAD4-215ENST00000592911 P2RX5Q93086 422 aa10.17□□□□□ -0.78
SMAD4-215ENST00000592911 RMDN3Q96TC7 470 aa10.17□□□□□ -0.78
SMAD4-215ENST00000592911 FSD1Q9BTV5 496 aa10.17□□□□□ -0.78
SMAD4-215ENST00000592911 RNF41Q9H4P4 317 aaPredicted RBP10.17□□□□□ -0.78
SMAD4-215ENST00000592911 MRPL11Q9Y3B7 192 aaKnown RBP10.17□□□□□ -0.78
SMAD4-215ENST00000592911 H3BQ06 376 aaPredicted RBP10.16□□□□□ -0.78
SMAD4-215ENST00000592911 MBTPS2O43462 519 aa10.16□□□□□ -0.78
SMAD4-215ENST00000592911 NMT2O60551 498 aa10.16□□□□□ -0.78
SMAD4-215ENST00000592911 HSPD1P10809 573 aaKnown RBP10.16□□□□□ -0.78
SMAD4-215ENST00000592911 SLC16A2P36021 539 aa10.16□□□□□ -0.78
SMAD4-215ENST00000592911 LTBRP36941 435 aa10.16□□□□□ -0.78
SMAD4-215ENST00000592911 CBX2Q14781 532 aaPredicted RBP10.16□□□□□ -0.78
SMAD4-215ENST00000592911 LY6KQ17RY6 165 aa10.16□□□□□ -0.78
SMAD4-215ENST00000592911 ASPRV1Q53RT3 343 aa10.16□□□□□ -0.78
SMAD4-215ENST00000592911 SEPT14Q6ZU15 432 aa10.16□□□□□ -0.78
SMAD4-215ENST00000592911 SUGP1Q8IWZ8 645 aaKnown RBP10.16□□□□□ -0.78
SMAD4-215ENST00000592911 PLPP6Q8IY26 295 aa10.16□□□□□ -0.78
SMAD4-215ENST00000592911 DHX37Q8IY37 1157 aaKnown RBP10.16□□□□□ -0.78
SMAD4-215ENST00000592911 FIBCD1Q8N539 461 aa10.16□□□□□ -0.78
SMAD4-215ENST00000592911 SYTL5Q8TDW5 730 aaPredicted RBP10.16□□□□□ -0.78
SMAD4-215ENST00000592911 HELLSQ9NRZ9 838 aa10.16□□□□□ -0.78
SMAD4-215ENST00000592911 WDR70Q9NW82 654 aa10.16□□□□□ -0.78
SMAD4-215ENST00000592911 CLDND1Q9NY35 253 aa10.16□□□□□ -0.78
SMAD4-215ENST00000592911 MRVI1Q9Y6F6 885 aa10.16□□□□□ -0.78
SMAD4-215ENST00000592911 LAMA4Q16363 1823 aa10.16□□□□□ -0.78
SMAD4-215ENST00000592911 C17orf102A2RUQ5 167 aa10.15□□□□□ -0.78
SMAD4-215ENST00000592911 FOXP2O15409 715 aa10.15□□□□□ -0.78
SMAD4-215ENST00000592911 STAM2O75886 525 aa10.15□□□□□ -0.78
SMAD4-215ENST00000592911 MMP1P03956 469 aa10.15□□□□□ -0.78
SMAD4-215ENST00000592911 BMPR1AP36894 532 aa10.15□□□□□ -0.78
SMAD4-215ENST00000592911 THPOP40225 353 aa10.15□□□□□ -0.78
SMAD4-215ENST00000592911 COASYQ13057 564 aa10.15□□□□□ -0.78
SMAD4-215ENST00000592911 TCTN1Q2MV58 587 aa10.15□□□□□ -0.78
SMAD4-215ENST00000592911 FAM26DQ5JW98 314 aa10.15□□□□□ -0.78
SMAD4-215ENST00000592911 CELF3Q5SZQ8 465 aaKnown RBP10.15□□□□□ -0.78
SMAD4-215ENST00000592911 ARHGEF16Q5VV41 709 aa10.15□□□□□ -0.78
SMAD4-215ENST00000592911 MYSM1Q5VVJ2 828 aa10.15□□□□□ -0.78
SMAD4-215ENST00000592911 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.15□□□□□ -0.785e-7■■■□□ 18.5
SMAD4-215ENST00000592911 TMCO2Q7Z6W1 182 aaPredicted RBP10.15□□□□□ -0.78
SMAD4-215ENST00000592911 RNF135Q8IUD6 432 aa10.15□□□□□ -0.78
SMAD4-215ENST00000592911 PI4K2BQ8TCG2 481 aa10.15□□□□□ -0.78
SMAD4-215ENST00000592911 IL17RAQ96F46 866 aa10.15□□□□□ -0.78
SMAD4-215ENST00000592911 USP26Q9BXU7 913 aa10.15□□□□□ -0.78
SMAD4-215ENST00000592911 PXMP2Q9NR77 195 aa10.15□□□□□ -0.78
SMAD4-215ENST00000592911 CD207Q9UJ71 328 aa10.15□□□□□ -0.78
SMAD4-215ENST00000592911 FRMPD2Q68DX3 1309 aaPredicted RBP10.14□□□□□ -0.79
SMAD4-215ENST00000592911 CCDC171Q6TFL3 1326 aa10.14□□□□□ -0.79
SMAD4-215ENST00000592911 ADGRA3Q8IWK6 1321 aa10.14□□□□□ -0.79
SMAD4-215ENST00000592911 LOC730098B7Z3J9 87 aa10.14□□□□□ -0.79
SMAD4-215ENST00000592911 PROB1E7EW31 1015 aa10.14□□□□□ -0.79
SMAD4-215ENST00000592911 STXBP3O00186 592 aa10.14□□□□□ -0.79
SMAD4-215ENST00000592911 SMARCA5O60264 1052 aaPredicted RBP10.14□□□□□ -0.79
SMAD4-215ENST00000592911 NR3C2P08235 984 aa10.14□□□□□ -0.79
SMAD4-215ENST00000592911 ATF7P17544 494 aaPredicted RBP10.14□□□□□ -0.79
SMAD4-215ENST00000592911 HSD17B4P51659 736 aa10.14□□□□□ -0.79
SMAD4-215ENST00000592911 CTDSPL2Q05D32 466 aa10.14□□□□□ -0.79
SMAD4-215ENST00000592911 CDC37Q16543 378 aaPredicted RBP10.14□□□□□ -0.79
SMAD4-215ENST00000592911 TAF2Q6P1X5 1199 aa10.14□□□□□ -0.79
SMAD4-215ENST00000592911 TRIM67Q6ZTA4 783 aa10.14□□□□□ -0.79
SMAD4-215ENST00000592911 STOX1Q6ZVD7 989 aa10.14□□□□□ -0.79
SMAD4-215ENST00000592911 FBXL6Q8N531 539 aa10.14□□□□□ -0.79
SMAD4-215ENST00000592911 ANKS1AQ92625 1134 aa10.14□□□□□ -0.79
SMAD4-215ENST00000592911 ATP6V0A1Q93050 837 aa10.14□□□□□ -0.79
SMAD4-215ENST00000592911 EVI5LQ96CN4 794 aa10.14□□□□□ -0.79
SMAD4-215ENST00000592911 SEC62Q99442 399 aaKnown RBP10.14□□□□□ -0.79
SMAD4-215ENST00000592911 C16orf70Q9BSU1 422 aa10.14□□□□□ -0.79
SMAD4-215ENST00000592911 ALG1Q9BT22 464 aa10.14□□□□□ -0.79
SMAD4-215ENST00000592911 IFIH1Q9BYX4 1025 aaKnown RBP10.14□□□□□ -0.79
SMAD4-215ENST00000592911 RC3H2Q9HBD1 1191 aaKnown RBP10.14□□□□□ -0.79
SMAD4-215ENST00000592911 GPCPD1Q9NPB8 672 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms