RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 CDC27P30260 824 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 RTP1P59025 263 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 ANAPC15P60006 121 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 TTLL4Q14679 1199 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 FSCN1Q16658 493 aaKnown RBP11.92□□□□□ -0.5
SDF2-208ENST00000589788 SLC39A5Q6ZMH5 540 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 RNF19BQ6ZMZ0 732 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 SEPT14Q6ZU15 432 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 RETREG3Q86VR2 466 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 PRR7Q8TB68 274 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 WNT2BQ93097 391 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 VTI1AQ96AJ9 217 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 GLT1D1Q96MS3 346 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 PDCD2LQ9BRP1 358 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 PRR14Q9BWN1 585 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 PSTPIP2Q9H939 334 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 PDRG1Q9NUG6 133 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 ATP11BQ9Y2G3 1177 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 V9GY48 417 aaPredicted RBP11.92□□□□□ -0.5
SDF2-208ENST00000589788 CEP290O15078 2479 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 KIAA1217Q5T5P2 1943 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 BRCA2P51587 3418 aa11.91□□□□□ -0.5
SDF2-208ENST00000589788 EIF3JO75822 258 aaKnown RBP11.91□□□□□ -0.5
SDF2-208ENST00000589788 ASGR1P07306 291 aa11.91□□□□□ -0.5
SDF2-208ENST00000589788 CCND2P30279 289 aa11.91□□□□□ -0.5
SDF2-208ENST00000589788 ADD1P35611 737 aaKnown RBP11.91□□□□□ -0.5
SDF2-208ENST00000589788 BEX3Q00994 111 aa11.91□□□□□ -0.5
SDF2-208ENST00000589788 TOB2Q14106 344 aaPredicted RBP11.91□□□□□ -0.5
SDF2-208ENST00000589788 BRDTQ58F21 947 aaPredicted RBP11.91□□□□□ -0.5
SDF2-208ENST00000589788 BLOC1S3Q6QNY0 202 aa11.91□□□□□ -0.5
SDF2-208ENST00000589788 OR6J1Q8NGC5 347 aa11.91□□□□□ -0.5
SDF2-208ENST00000589788 GPKOWQ92917 476 aaPredicted RBP eCLIP11.91□□□□□ -0.5
SDF2-208ENST00000589788 STARD7Q9NQZ5 370 aa11.91□□□□□ -0.5
SDF2-208ENST00000589788 TSR3Q9UJK0 312 aaKnown RBP11.91□□□□□ -0.5
SDF2-208ENST00000589788 ZMYND8Q9ULU4 1186 aaPredicted RBP11.91□□□□□ -0.5
SDF2-208ENST00000589788 GOLGA8CPA6NN73 597 aa11.9□□□□□ -0.5
SDF2-208ENST00000589788 hCG_1984214I3L0E3 225 aa11.9□□□□□ -0.5
SDF2-208ENST00000589788 PIK3CDO00329 1044 aa11.9□□□□□ -0.5
SDF2-208ENST00000589788 PTGS1P23219 599 aa11.9□□□□□ -0.5
SDF2-208ENST00000589788 PDIA3P30101 505 aaKnown RBP11.9□□□□□ -0.5
SDF2-208ENST00000589788 CPT1AP50416 773 aa11.9□□□□□ -0.5
SDF2-208ENST00000589788 NAPAP54920 295 aa11.9□□□□□ -0.5
SDF2-208ENST00000589788 EVCP57679 992 aa11.9□□□□□ -0.5
SDF2-208ENST00000589788 NKX3-2P78367 333 aa11.9□□□□□ -0.5
SDF2-208ENST00000589788 CCT2P78371 535 aaKnown RBP11.9□□□□□ -0.5
SDF2-208ENST00000589788 AKAP17AQ02040 695 aaKnown RBP11.9□□□□□ -0.5
SDF2-208ENST00000589788 SNX17Q15036 470 aa11.9□□□□□ -0.5
SDF2-208ENST00000589788 PGM5Q15124 567 aa11.9□□□□□ -0.5
SDF2-208ENST00000589788 TRIM60Q495X7 471 aa11.9□□□□□ -0.5
SDF2-208ENST00000589788 TMEM63BQ5T3F8 832 aa11.9□□□□□ -0.5
SDF2-208ENST00000589788 WWC2Q6AWC2 1192 aa11.9□□□□□ -0.5
SDF2-208ENST00000589788 CCSAPQ6IQ19 270 aaPredicted RBP11.9□□□□□ -0.5
SDF2-208ENST00000589788 USP17L6PQ6QN14 398 aa11.9□□□□□ -0.5
SDF2-208ENST00000589788 ZNF713Q8N859 430 aaPredicted RBP11.9□□□□□ -0.5
SDF2-208ENST00000589788 TSC1Q92574 1164 aa11.9□□□□□ -0.5
SDF2-208ENST00000589788 PRKAG2Q9UGJ0 569 aa11.9□□□□□ -0.5
SDF2-208ENST00000589788 MRVI1Q9Y6F6 885 aa11.9□□□□□ -0.5
SDF2-208ENST00000589788 NID2Q14112 1375 aa11.9□□□□□ -0.5
SDF2-208ENST00000589788 ELP1O95163 1332 aa11.9□□□□□ -0.5
SDF2-208ENST00000589788 MEIS2O14770 477 aa11.89□□□□□ -0.51
SDF2-208ENST00000589788 CTAGE5O15320 804 aa11.89□□□□□ -0.51
SDF2-208ENST00000589788 CABYRO75952 493 aa11.89□□□□□ -0.51
SDF2-208ENST00000589788 SYN1P17600 705 aa11.89□□□□□ -0.51
SDF2-208ENST00000589788 ABL2P42684 1182 aa11.89□□□□□ -0.51
SDF2-208ENST00000589788 C1orf53Q5VUE5 145 aa11.89□□□□□ -0.51
SDF2-208ENST00000589788 PPP1R18Q6NYC8 613 aa11.89□□□□□ -0.51
SDF2-208ENST00000589788 VSIG10LQ86VR7 867 aa11.89□□□□□ -0.51
SDF2-208ENST00000589788 IL31RAQ8NI17 732 aa11.89□□□□□ -0.51
SDF2-208ENST00000589788 ZNF274Q96GC6 653 aaPredicted RBP11.89□□□□□ -0.51
SDF2-208ENST00000589788 EHMT1Q9H9B1 1298 aa11.89□□□□□ -0.51
SDF2-208ENST00000589788 A0A0U1RQG5 324 aaPredicted RBP11.88□□□□□ -0.51
SDF2-208ENST00000589788 SPDYE3A6NKU9 549 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 STXBP3O00186 592 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 CPLX1O14810 134 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 PRPF3O43395 683 aaKnown RBP11.88□□□□□ -0.51
SDF2-208ENST00000589788 PQBP1O60828 265 aaKnown RBP11.88□□□□□ -0.51
SDF2-208ENST00000589788 STAM2O75886 525 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 ARIH2O95376 493 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 GH1P01241 217 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 SCG2P13521 617 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 ADCY7P51828 1080 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 TLE2Q04725 743 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 STK3Q13188 491 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 UBE2SQ16763 222 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 PFKFB3Q16875 520 aaPredicted RBP11.88□□□□□ -0.51
SDF2-208ENST00000589788 LY6KQ17RY6 165 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 GNPTABQ3T906 1256 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 CCDC62Q6P9F0 684 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 KCNV1Q6PIU1 500 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 CPLX2Q6PUV4 134 aaKnown RBP11.88□□□□□ -0.51
SDF2-208ENST00000589788 CXCL17Q6UXB2 119 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 EPS8L1Q8TE68 723 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 COPS5Q92905 334 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 THAP11Q96EK4 314 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 SLC26A6Q9BXS9 759 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 GLT8D2Q9H1C3 349 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 NCOA5Q9HCD5 579 aaKnown RBP11.88□□□□□ -0.51
SDF2-208ENST00000589788 PRDM5Q9NQX1 630 aaPredicted RBP11.88□□□□□ -0.51
SDF2-208ENST00000589788 BARHL2Q9NY43 387 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 FRMPD4Q14CM0 1322 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms