RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 GPR20Q99678 358 aa11.74□□□□□ -0.53
PPP4R1-220ENST00000581835 C16orf70Q9BSU1 422 aa11.74□□□□□ -0.53
PPP4R1-220ENST00000581835 KATNAL1Q9BW62 490 aa11.74□□□□□ -0.53
PPP4R1-220ENST00000581835 C6orf50Q9HD87 102 aa11.74□□□□□ -0.53
PPP4R1-220ENST00000581835 JADE2Q9NQC1 790 aa11.74□□□□□ -0.53
PPP4R1-220ENST00000581835 TPCN1Q9ULQ1 816 aa11.74□□□□□ -0.53
PPP4R1-220ENST00000581835 TELO2Q9Y4R8 837 aa11.74□□□□□ -0.53
PPP4R1-220ENST00000581835 MYO9BQ13459 2157 aa11.74□□□□□ -0.53
PPP4R1-220ENST00000581835 NOP56O00567 594 aaKnown RBP11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 LGALS2P05162 132 aa11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 GNA11P29992 359 aa11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 SREBF1P36956 1147 aa11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 CCL23P55773 120 aa11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 PPIGQ13427 754 aaKnown RBP eCLIP11.73□□□□□ -0.531e-10■□□□□ 10.2
PPP4R1-220ENST00000581835 MFSD10Q14728 455 aa11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 ANKRD1Q15327 319 aa11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 PTGISQ16647 500 aa11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 KIAA0753Q2KHM9 967 aa11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 GDF6Q6KF10 455 aaPredicted RBP11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 CPLX2Q6PUV4 134 aaKnown RBP11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 C16orf59Q7L2K0 433 aa11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 TRIM22Q8IYM9 498 aa11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 GIMAP8Q8ND71 665 aaPredicted RBP11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 CYP2W1Q8TAV3 490 aa11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 CTAGE1Q96RT6 745 aa11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 MXRA8Q9BRK3 442 aa11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 ALG1Q9BT22 464 aa11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 WNT8AQ9H1J5 351 aa11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 SLKQ9H2G2 1235 aaPredicted RBP11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 SH3GLB2Q9NR46 395 aa11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 VPS54Q9P1Q0 977 aa11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 HDAC6Q9UBN7 1215 aa11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 GTF2IRD1Q9UHL9 959 aa11.73□□□□□ -0.53
PPP4R1-220ENST00000581835 H3BRB1 525 aa11.72□□□□□ -0.53
PPP4R1-220ENST00000581835 MEIS1O00470 390 aa11.72□□□□□ -0.53
PPP4R1-220ENST00000581835 PFKFB2O60825 505 aa11.72□□□□□ -0.53
PPP4R1-220ENST00000581835 DEXIO95424 95 aa11.72□□□□□ -0.53
PPP4R1-220ENST00000581835 CYP3A4P08684 503 aa11.72□□□□□ -0.53
PPP4R1-220ENST00000581835 ARHGAP4P98171 946 aa11.72□□□□□ -0.53
PPP4R1-220ENST00000581835 SP4Q02446 784 aa11.72□□□□□ -0.53
PPP4R1-220ENST00000581835 CEP55Q53EZ4 464 aa11.72□□□□□ -0.53
PPP4R1-220ENST00000581835 TMEM240Q5SV17 173 aa11.72□□□□□ -0.53
PPP4R1-220ENST00000581835 MCTP2Q6DN12 878 aa11.72□□□□□ -0.53
PPP4R1-220ENST00000581835 REXO1Q8N1G1 1221 aaKnown RBP11.72□□□□□ -0.53
PPP4R1-220ENST00000581835 C7orf31Q8N865 590 aa11.72□□□□□ -0.53
PPP4R1-220ENST00000581835 CCDC148Q8NFR7 591 aa11.72□□□□□ -0.53
PPP4R1-220ENST00000581835 BICD2Q8TD16 824 aa11.72□□□□□ -0.53
PPP4R1-220ENST00000581835 CRYGNQ8WXF5 182 aa11.72□□□□□ -0.53
PPP4R1-220ENST00000581835 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.72□□□□□ -0.531e-18■□□□□ 10.3
PPP4R1-220ENST00000581835 TUT1Q9H6E5 874 aaKnown RBP11.72□□□□□ -0.53
PPP4R1-220ENST00000581835 KCNH7Q9NS40 1196 aa11.72□□□□□ -0.53
PPP4R1-220ENST00000581835 NOD1Q9Y239 953 aa11.72□□□□□ -0.53
PPP4R1-220ENST00000581835 TANC1Q9C0D5 1861 aa11.72□□□□□ -0.53
PPP4R1-220ENST00000581835 PITPNM1O00562 1244 aa11.71□□□□□ -0.53
PPP4R1-220ENST00000581835 ARP10275 920 aa11.71□□□□□ -0.53
PPP4R1-220ENST00000581835 ACRP10323 421 aa11.71□□□□□ -0.53
PPP4R1-220ENST00000581835 TCF7P36402 384 aaPredicted RBP11.71□□□□□ -0.53
PPP4R1-220ENST00000581835 NEK4P51957 841 aa11.71□□□□□ -0.53
PPP4R1-220ENST00000581835 NLRP5P59047 1200 aa11.71□□□□□ -0.53
PPP4R1-220ENST00000581835 HIC1Q14526 733 aa11.71□□□□□ -0.53
PPP4R1-220ENST00000581835 GPR153Q6NV75 609 aa11.71□□□□□ -0.53
PPP4R1-220ENST00000581835 ZNF365Q70YC5 407 aa11.71□□□□□ -0.53
PPP4R1-220ENST00000581835 RASGRP4Q8TDF6 673 aa11.71□□□□□ -0.53
PPP4R1-220ENST00000581835 SEPT1Q8WYJ6 367 aa11.71□□□□□ -0.53
PPP4R1-220ENST00000581835 VWCEQ96DN2 955 aa11.71□□□□□ -0.53
PPP4R1-220ENST00000581835 SCLYQ96I15 445 aa11.71□□□□□ -0.53
PPP4R1-220ENST00000581835 RNPC3Q96LT9 517 aaKnown RBP11.71□□□□□ -0.53
PPP4R1-220ENST00000581835 AIFM3Q96NN9 605 aa11.71□□□□□ -0.53
PPP4R1-220ENST00000581835 IL23AQ9NPF7 189 aa11.71□□□□□ -0.53
PPP4R1-220ENST00000581835 PKD2L1Q9P0L9 805 aa11.71□□□□□ -0.53
PPP4R1-220ENST00000581835 MYH9P35579 1960 aaKnown RBP11.7□□□□□ -0.54
PPP4R1-220ENST00000581835 CDH23Q9H251 3354 aa11.7□□□□□ -0.54
PPP4R1-220ENST00000581835 WDR81Q562E7 1941 aa11.7□□□□□ -0.54
PPP4R1-220ENST00000581835 NFASCO94856 1347 aa11.7□□□□□ -0.54
PPP4R1-220ENST00000581835 IGLV3-22A0A075B6J6 115 aa11.7□□□□□ -0.54
PPP4R1-220ENST00000581835 GSTTP1A0A1W2PQM5 241 aa11.7□□□□□ -0.54
PPP4R1-220ENST00000581835 FAM86B1E9PN63 330 aa11.7□□□□□ -0.54
PPP4R1-220ENST00000581835 CDKL5O76039 1030 aa11.7□□□□□ -0.54
PPP4R1-220ENST00000581835 FAM86B2P0C5J1 330 aa11.7□□□□□ -0.54
PPP4R1-220ENST00000581835 IQCF3P0C7M6 154 aa11.7□□□□□ -0.54
PPP4R1-220ENST00000581835 ZNF76P36508 570 aa11.7□□□□□ -0.54
PPP4R1-220ENST00000581835 ZNF200P98182 395 aaPredicted RBP11.7□□□□□ -0.54
PPP4R1-220ENST00000581835 ME3Q16798 604 aa11.7□□□□□ -0.54
PPP4R1-220ENST00000581835 UTP14CQ5TAP6 766 aaKnown RBP11.7□□□□□ -0.54
PPP4R1-220ENST00000581835 PSRC1Q6PGN9 363 aaPredicted RBP11.7□□□□□ -0.54
PPP4R1-220ENST00000581835 NIPA1Q7RTP0 329 aa11.7□□□□□ -0.54
PPP4R1-220ENST00000581835 TRIM50Q86XT4 487 aa11.7□□□□□ -0.54
PPP4R1-220ENST00000581835 DHX38Q92620 1227 aaKnown RBP11.7□□□□□ -0.54
PPP4R1-220ENST00000581835 AGO4Q9HCK5 861 aaKnown RBP11.7□□□□□ -0.54
PPP4R1-220ENST00000581835 STK36Q9NRP7 1315 aa11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 M0R2N6 131 aa11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 DTNBO60941 627 aa11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 LARGE1O95461 756 aa11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 CTDNEP1O95476 244 aa11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 SMIM10L2AP0DMW4 78 aa11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 SMIM10L2BP0DMW5 78 aa11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 HOXC8P31273 242 aa11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 CIITAP33076 1130 aa11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 RBL2Q08999 1139 aa11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 PTK7Q13308 1070 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms