RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 LRRC8DQ7L1W4 858 aa11.09□□□□□ -0.63
NPLOC4-216ENST00000574344 DHX32Q7L7V1 743 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-216ENST00000574344 INPP4AQ96PE3 977 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-216ENST00000574344 SLC9A7Q96T83 725 aa11.09□□□□□ -0.63
NPLOC4-216ENST00000574344 PRDM12Q9H4Q4 367 aa11.09□□□□□ -0.63
NPLOC4-216ENST00000574344 LOXHD1Q8IVV2 1947 aa11.09□□□□□ -0.63
NPLOC4-216ENST00000574344 CHD7Q9P2D1 2997 aa11.08□□□□□ -0.64
NPLOC4-216ENST00000574344 SIP14410 1827 aa11.08□□□□□ -0.64
NPLOC4-216ENST00000574344 C17orf102A2RUQ5 167 aa11.08□□□□□ -0.64
NPLOC4-216ENST00000574344 HAS3O00219 553 aa11.08□□□□□ -0.64
NPLOC4-216ENST00000574344 LGALS2P05162 132 aa11.08□□□□□ -0.64
NPLOC4-216ENST00000574344 HMGB1P09429 215 aaKnown RBP11.08□□□□□ -0.64
NPLOC4-216ENST00000574344 CKBP12277 381 aa11.08□□□□□ -0.64
NPLOC4-216ENST00000574344 HOXD8P13378 290 aaPredicted RBP11.08□□□□□ -0.64
NPLOC4-216ENST00000574344 ICAM3P32942 547 aa11.08□□□□□ -0.64
NPLOC4-216ENST00000574344 PTK7Q13308 1070 aa11.08□□□□□ -0.64
NPLOC4-216ENST00000574344 UTP14CQ5TAP6 766 aaKnown RBP11.08□□□□□ -0.64
NPLOC4-216ENST00000574344 XRRA1Q6P2D8 792 aa11.08□□□□□ -0.64
NPLOC4-216ENST00000574344 METTL7BQ6UX53 244 aa11.08□□□□□ -0.64
NPLOC4-216ENST00000574344 RASEFQ8IZ41 740 aa11.08□□□□□ -0.64
NPLOC4-216ENST00000574344 PPM1EQ8WY54 764 aa11.08□□□□□ -0.64
NPLOC4-216ENST00000574344 DHX38Q92620 1227 aaKnown RBP11.08□□□□□ -0.64
NPLOC4-216ENST00000574344 PKD2L1Q9P0L9 805 aa11.08□□□□□ -0.64
NPLOC4-216ENST00000574344 ZNF215Q9UL58 517 aaPredicted RBP11.08□□□□□ -0.64
NPLOC4-216ENST00000574344 YBX2Q9Y2T7 364 aaKnown RBP11.08□□□□□ -0.64
NPLOC4-216ENST00000574344 PCDHA11Q9Y5I1 949 aa11.08□□□□□ -0.64
NPLOC4-216ENST00000574344 MYH9P35579 1960 aaKnown RBP11.08□□□□□ -0.64
NPLOC4-216ENST00000574344 NLRC5Q86WI3 1866 aa11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 SPATA31C2B4DYI2 1134 aa11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 H3BRB1 525 aa11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 BAIAP3O94812 1187 aa11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 PARNO95453 639 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 CPA1P15085 419 aa11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 MYOGP15173 224 aa11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 IGFBP4P22692 258 aa11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 METAP2P50579 478 aaKnown RBP eCLIP11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 ZNF200P98182 395 aaPredicted RBP11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 EXOSC10Q01780 885 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 SEMA3FQ13275 785 aa11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 WWC2Q6AWC2 1192 aa11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 TRIM50Q86XT4 487 aa11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 GIMAP8Q8ND71 665 aaPredicted RBP11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 ATP6V0A1Q93050 837 aa11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 CDHR1Q96JP9 859 aa11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 JAKMIP1Q96N16 626 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 TBC1D32Q96NH3 1257 aa11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 CTAGE1Q96RT6 745 aa11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 C16orf70Q9BSU1 422 aa11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 USP26Q9BXU7 913 aa11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 TUT1Q9H6E5 874 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 BCAS3Q9H6U6 928 aa11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 BRPF3Q9ULD4 1205 aa11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 WDR81Q562E7 1941 aa11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 TRANK1O15050 2925 aa11.07□□□□□ -0.64
NPLOC4-216ENST00000574344 KIF28PB7ZC32 967 aa11.06□□□□□ -0.64
NPLOC4-216ENST00000574344 REC8O95072 547 aa11.06□□□□□ -0.64
NPLOC4-216ENST00000574344 CA3P07451 260 aa11.06□□□□□ -0.64
NPLOC4-216ENST00000574344 SMIM10L2AP0DMW4 78 aa11.06□□□□□ -0.64
NPLOC4-216ENST00000574344 SMIM10L2BP0DMW5 78 aa11.06□□□□□ -0.64
NPLOC4-216ENST00000574344 THPOP40225 353 aa11.06□□□□□ -0.64
NPLOC4-216ENST00000574344 ADCY7P51828 1080 aa11.06□□□□□ -0.64
NPLOC4-216ENST00000574344 MTMR1Q13613 665 aa11.06□□□□□ -0.64
NPLOC4-216ENST00000574344 TSGA10IPQ3SY00 556 aa11.06□□□□□ -0.64
NPLOC4-216ENST00000574344 ZNF618Q5T7W0 954 aa11.06□□□□□ -0.64
NPLOC4-216ENST00000574344 PPP1R18Q6NYC8 613 aa11.06□□□□□ -0.64
NPLOC4-216ENST00000574344 CNKSR3Q6P9H4 555 aa11.06□□□□□ -0.64
NPLOC4-216ENST00000574344 BLOC1S2Q6QNY1 142 aa11.06□□□□□ -0.64
NPLOC4-216ENST00000574344 Q6ZUG5 572 aa11.06□□□□□ -0.64
NPLOC4-216ENST00000574344 GPRASP2Q96D09 838 aa11.06□□□□□ -0.64
NPLOC4-216ENST00000574344 VWCEQ96DN2 955 aa11.06□□□□□ -0.64
NPLOC4-216ENST00000574344 PGBD1Q96JS3 809 aa11.06□□□□□ -0.64
NPLOC4-216ENST00000574344 GPR20Q99678 358 aa11.06□□□□□ -0.64
NPLOC4-216ENST00000574344 PCDHA6Q9UN73 950 aa11.06□□□□□ -0.64
NPLOC4-216ENST00000574344 PCDHA8Q9Y5H6 950 aa11.06□□□□□ -0.64
NPLOC4-216ENST00000574344 hCG_1984214I3L0E3 225 aa11.05□□□□□ -0.64
NPLOC4-216ENST00000574344 CTSHP09668 335 aa11.05□□□□□ -0.64
NPLOC4-216ENST00000574344 GNAT1P11488 350 aa11.05□□□□□ -0.64
NPLOC4-216ENST00000574344 TCF7P36402 384 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-216ENST00000574344 WDR5P61964 334 aaKnown RBP11.05□□□□□ -0.64
NPLOC4-216ENST00000574344 ARHGAP4P98171 946 aa11.05□□□□□ -0.64
NPLOC4-216ENST00000574344 RBL2Q08999 1139 aa11.05□□□□□ -0.64
NPLOC4-216ENST00000574344 APOBRQ0VD83 1088 aa11.05□□□□□ -0.64
NPLOC4-216ENST00000574344 MICALL1Q8N3F8 863 aa11.05□□□□□ -0.64
NPLOC4-216ENST00000574344 ZNF713Q8N859 430 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-216ENST00000574344 PHOSPHO2Q8TCD6 241 aa11.05□□□□□ -0.64
NPLOC4-216ENST00000574344 BRF1Q92994 677 aa11.05□□□□□ -0.64
NPLOC4-216ENST00000574344 WNT8BQ93098 351 aa11.05□□□□□ -0.64
NPLOC4-216ENST00000574344 SENP7Q9BQF6 1050 aa11.05□□□□□ -0.64
NPLOC4-216ENST00000574344 ZBED2Q9BTP6 218 aa11.05□□□□□ -0.64
NPLOC4-216ENST00000574344 C22orf23Q9BZE7 217 aa11.05□□□□□ -0.64
NPLOC4-216ENST00000574344 V9GY48 417 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-216ENST00000574344 EMSYQ7Z589 1322 aa11.05□□□□□ -0.64
NPLOC4-216ENST00000574344 REV3LO60673 3130 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 CCDC196A0A1B0GTZ2 297 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 SMCO2A6NFE2 343 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 RSPH10B2B2RC85 870 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 TREHO43280 583 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 TLL1O43897 1013 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 NBNO60934 754 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 RSPH10BP0C881 870 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms