RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 SLC6A17Q9H1V8 727 aa6.75□□□□□ -1.33
SCAF11-214ENST00000550893 AP5S1Q9NUS5 200 aa6.75□□□□□ -1.33
SCAF11-214ENST00000550893 PCDHB10Q9UN67 800 aa6.75□□□□□ -1.33
SCAF11-214ENST00000550893 SLC12A7Q9Y666 1083 aa6.75□□□□□ -1.33
SCAF11-214ENST00000550893 FLT4P35916 1363 aa6.74□□□□□ -1.33
SCAF11-214ENST00000550893 KIF24Q5T7B8 1368 aa6.74□□□□□ -1.33
SCAF11-214ENST00000550893 KAT6BQ8WYB5 2073 aa6.74□□□□□ -1.33
SCAF11-214ENST00000550893 FADS2P1A8MWK0 482 aa6.74□□□□□ -1.33
SCAF11-214ENST00000550893 CBFA2T2O43439 604 aa6.74□□□□□ -1.33
SCAF11-214ENST00000550893 KCNQ2O43526 872 aa6.74□□□□□ -1.33
SCAF11-214ENST00000550893 KRT1P04264 644 aa6.74□□□□□ -1.33
SCAF11-214ENST00000550893 RTP1P59025 263 aa6.74□□□□□ -1.33
SCAF11-214ENST00000550893 TMF1P82094 1093 aa6.74□□□□□ -1.33
SCAF11-214ENST00000550893 PPP2R5EQ16537 467 aa6.74□□□□□ -1.33
SCAF11-214ENST00000550893 GNPTABQ3T906 1256 aa6.74□□□□□ -1.33
SCAF11-214ENST00000550893 RTP2Q5QGT7 225 aa6.74□□□□□ -1.33
SCAF11-214ENST00000550893 NBPF6Q5VWK0 638 aa6.74□□□□□ -1.33
SCAF11-214ENST00000550893 HDGFL2Q7Z4V5 671 aaPredicted RBP6.74□□□□□ -1.33
SCAF11-214ENST00000550893 IRF2BP1Q8IU81 584 aa6.74□□□□□ -1.33
SCAF11-214ENST00000550893 NBPF4Q96M43 638 aa6.74□□□□□ -1.33
SCAF11-214ENST00000550893 SLC12A9Q9BXP2 914 aa6.74□□□□□ -1.33
SCAF11-214ENST00000550893 PDGFDQ9GZP0 370 aaPredicted RBP6.74□□□□□ -1.33
SCAF11-214ENST00000550893 ERVK13-1Q9NX77 482 aa6.74□□□□□ -1.33
SCAF11-214ENST00000550893 TERF2IPQ9NYB0 399 aa6.74□□□□□ -1.33
SCAF11-214ENST00000550893 TNFRSF10DQ9UBN6 386 aa6.74□□□□□ -1.33
SCAF11-214ENST00000550893 FHOD1Q9Y613 1164 aa6.74□□□□□ -1.33
SCAF11-214ENST00000550893 PARD3Q8TEW0 1356 aa6.73□□□□□ -1.33
SCAF11-214ENST00000550893 DBX1A6NMT0 343 aa6.73□□□□□ -1.33
SCAF11-214ENST00000550893 TSPAN15O95858 294 aa6.73□□□□□ -1.33
SCAF11-214ENST00000550893 ENDOUP21128 410 aaKnown RBP6.73□□□□□ -1.33
SCAF11-214ENST00000550893 ERCC5P28715 1186 aaPredicted RBP6.73□□□□□ -1.33
SCAF11-214ENST00000550893 PDE6BP35913 854 aa6.73□□□□□ -1.33
SCAF11-214ENST00000550893 RAP1GAPP47736 663 aa6.73□□□□□ -1.33
SCAF11-214ENST00000550893 HSP90AB2PQ58FF8 381 aa6.73□□□□□ -1.33
SCAF11-214ENST00000550893 CWF19L1Q69YN2 538 aaKnown RBP6.73□□□□□ -1.33
SCAF11-214ENST00000550893 FIBCD1Q8N539 461 aa6.73□□□□□ -1.33
SCAF11-214ENST00000550893 FAM169BQ8N8A8 192 aa6.73□□□□□ -1.33
SCAF11-214ENST00000550893 PPP1R16BQ96T49 567 aa6.73□□□□□ -1.33
SCAF11-214ENST00000550893 HAUS7Q99871 368 aa6.73□□□□□ -1.33
SCAF11-214ENST00000550893 PLCD4Q9BRC7 762 aa6.73□□□□□ -1.33
SCAF11-214ENST00000550893 NOL6Q9H6R4 1146 aaKnown RBP6.73□□□□□ -1.33
SCAF11-214ENST00000550893 PHAXQ9H814 394 aaKnown RBP6.73□□□□□ -1.33
SCAF11-214ENST00000550893 GPR55Q9Y2T6 319 aaPredicted RBP6.73□□□□□ -1.33
SCAF11-214ENST00000550893 DLG5Q8TDM6 1919 aa6.73□□□□□ -1.33
SCAF11-214ENST00000550893 KDM6AO15550 1401 aaPredicted RBP6.73□□□□□ -1.33
SCAF11-214ENST00000550893 WASHC2AQ641Q2 1341 aa6.73□□□□□ -1.33
SCAF11-214ENST00000550893 MRC1P22897 1456 aa6.73□□□□□ -1.33
SCAF11-214ENST00000550893 GSTM1P09488 218 aa6.72□□□□□ -1.33
SCAF11-214ENST00000550893 C1QTNF9P0C862 333 aa6.72□□□□□ -1.33
SCAF11-214ENST00000550893 ITGA4P13612 1032 aa6.72□□□□□ -1.33
SCAF11-214ENST00000550893 ATF4P18848 351 aaPredicted RBP6.72□□□□□ -1.33
SCAF11-214ENST00000550893 SLC7A5Q01650 507 aa6.72□□□□□ -1.33
SCAF11-214ENST00000550893 KIR3DS1Q14943 382 aa6.72□□□□□ -1.33
SCAF11-214ENST00000550893 TCEAL1Q15170 157 aa6.72□□□□□ -1.33
SCAF11-214ENST00000550893 HSF5Q4G112 596 aaPredicted RBP6.72□□□□□ -1.33
SCAF11-214ENST00000550893 TOM1L2Q6ZVM7 507 aa6.72□□□□□ -1.33
SCAF11-214ENST00000550893 ZNF605Q86T29 641 aa6.72□□□□□ -1.33
SCAF11-214ENST00000550893 TMEM52Q8NDY8 209 aa6.72□□□□□ -1.33
SCAF11-214ENST00000550893 KDRP35968 1356 aa6.71□□□□□ -1.33
SCAF11-214ENST00000550893 TCF3P15923 654 aa6.71□□□□□ -1.34
SCAF11-214ENST00000550893 CASP7P55210 303 aa6.71□□□□□ -1.34
SCAF11-214ENST00000550893 DDB1Q16531 1140 aa6.71□□□□□ -1.34
SCAF11-214ENST00000550893 SLCO6A1Q86UG4 719 aa6.71□□□□□ -1.34
SCAF11-214ENST00000550893 CILP2Q8IUL8 1156 aa6.71□□□□□ -1.34
SCAF11-214ENST00000550893 KLHL6Q8WZ60 621 aa6.71□□□□□ -1.34
SCAF11-214ENST00000550893 ANAPC16Q96DE5 110 aa6.71□□□□□ -1.34
SCAF11-214ENST00000550893 KLHL25Q9H0H3 589 aa6.71□□□□□ -1.34
SCAF11-214ENST00000550893 ZNF552Q9H707 407 aaPredicted RBP6.71□□□□□ -1.34
SCAF11-214ENST00000550893 CRTAC1Q9NQ79 661 aa6.71□□□□□ -1.34
SCAF11-214ENST00000550893 POLKQ9UBT6 870 aa6.71□□□□□ -1.34
SCAF11-214ENST00000550893 STRIP2Q9ULQ0 834 aa6.71□□□□□ -1.34
SCAF11-214ENST00000550893 SF3B6Q9Y3B4 125 aaKnown RBP6.71□□□□□ -1.34
SCAF11-214ENST00000550893 KIF13BQ9NQT8 1826 aa6.71□□□□□ -1.34
SCAF11-214ENST00000550893 BRCA1P38398 1863 aaKnown RBP6.7□□□□□ -1.34
SCAF11-214ENST00000550893 A0A087WZG4 1122 aa6.7□□□□□ -1.34
SCAF11-214ENST00000550893 WTIPA6NIX2 430 aaPredicted RBP6.7□□□□□ -1.34
SCAF11-214ENST00000550893 ETV2O00321 342 aaPredicted RBP6.7□□□□□ -1.34
SCAF11-214ENST00000550893 NFIBO00712 420 aa6.7□□□□□ -1.34
SCAF11-214ENST00000550893 CYP27B1O15528 508 aa6.7□□□□□ -1.34
SCAF11-214ENST00000550893 TMEM253P0C7T8 217 aa6.7□□□□□ -1.34
SCAF11-214ENST00000550893 PPP2R5DQ14738 602 aa6.7□□□□□ -1.34
SCAF11-214ENST00000550893 ZNF827Q17R98 1081 aa6.7□□□□□ -1.34
SCAF11-214ENST00000550893 ADGRF1Q5T601 910 aa6.7□□□□□ -1.34
SCAF11-214ENST00000550893 HEATR6Q6AI08 1181 aaKnown RBP6.7□□□□□ -1.34
SCAF11-214ENST00000550893 GALNT18Q6P9A2 607 aa6.7□□□□□ -1.34
SCAF11-214ENST00000550893 AMIGO3Q86WK7 504 aa6.7□□□□□ -1.34
SCAF11-214ENST00000550893 ADCY4Q8NFM4 1077 aa6.7□□□□□ -1.34
SCAF11-214ENST00000550893 KCNN1Q92952 543 aa6.7□□□□□ -1.34
SCAF11-214ENST00000550893 COG3Q96JB2 828 aa6.7□□□□□ -1.34
SCAF11-214ENST00000550893 FGD4Q96M96 766 aa6.7□□□□□ -1.34
SCAF11-214ENST00000550893 ZDHHC15Q96MV8 337 aa6.7□□□□□ -1.34
SCAF11-214ENST00000550893 FCRL3Q96P31 734 aaPredicted RBP6.7□□□□□ -1.34
SCAF11-214ENST00000550893 MCOLN1Q9GZU1 580 aa6.7□□□□□ -1.34
SCAF11-214ENST00000550893 WHRNQ9P202 907 aa6.7□□□□□ -1.34
SCAF11-214ENST00000550893 IGSF1Q8N6C5 1336 aa6.7□□□□□ -1.34
SCAF11-214ENST00000550893 MYOCOSA0A1B0GUC4 107 aa6.69□□□□□ -1.34
SCAF11-214ENST00000550893 A0A1W2PQ45 241 aaPredicted RBP6.69□□□□□ -1.34
SCAF11-214ENST00000550893 A0A1W2PQY0 241 aa6.69□□□□□ -1.34
SCAF11-214ENST00000550893 OR14I1A6ND48 311 aa6.69□□□□□ -1.34
SCAF11-214ENST00000550893 EPHX1P07099 455 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms