RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 SMYD5Q6GMV2 418 aa9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 CCDC73Q6ZRK6 1079 aa9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 NCAPG2Q86XI2 1143 aa9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 CYP2W1Q8TAV3 490 aa9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 ETNPPLQ8TBG4 499 aa9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 GTF3C2Q8WUA4 911 aaPredicted RBP9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 CCDC102AQ96A19 550 aa9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 UIMC1Q96RL1 719 aa9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 ZIC5Q96T25 663 aa9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 NAP1L4Q99733 375 aaKnown RBP9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 ANP32EQ9BTT0 268 aa9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 MAF1Q9H063 256 aa9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 GZF1Q9H116 711 aaPredicted RBP9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 PORCNQ9H237 461 aa9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 EHMT1Q9H9B1 1298 aa9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 NPDC1Q9NQX5 325 aaPredicted RBP9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 PXMP2Q9NR77 195 aa9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 MORF4L1Q9UBU8 362 aa9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 ZSWIM8A7E2V4 1837 aa9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 ZNF236Q9UL36 1845 aa9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 PP2D1A8MPX8 630 aa9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 AOC2O75106 756 aa9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 SLC25A27O95847 323 aa9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 LONP1P36776 959 aaKnown RBP9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 MRPS9P82933 396 aaKnown RBP9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 CNTN2Q02246 1040 aa9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 PRR16Q569H4 304 aa9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 CCDC183Q5T5S1 534 aa9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 PCNX4Q63HM2 1172 aa9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 PADI6Q6TGC4 694 aa9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 DTHD1Q6ZMT9 781 aa9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 ANKRD13CQ8N6S4 541 aa9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 IGSF22Q8N9C0 903 aa9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 SMCR8Q8TEV9 937 aaPredicted RBP9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 SYMPKQ92797 1274 aaKnown RBP9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 EPSTI1Q96J88 318 aa9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 FGD4Q96M96 766 aa9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 PARK7Q99497 189 aaKnown RBP9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 PDCD2LQ9BRP1 358 aa9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 CLSTN2Q9H4D0 955 aa9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 EFCC1Q9HA90 598 aa9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 DDX19AQ9NUU7 478 aaKnown RBP9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 FBXO40Q9UH90 709 aa9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 UBIAD1Q9Y5Z9 338 aa9.15□□□□□ -0.94
DEPDC4-207ENST00000549249 PFASO15067 1338 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 DNAJC25-GNG10A0A024R161 153 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 CCDC85CA6NKD9 419 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 SMAPO00193 183 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 MEIS1O00470 390 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 MSH4O15457 936 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 ZNF202O95125 648 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 ARP10275 920 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 ITGB5P18084 799 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 CDC25AP30304 524 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 COPB2P35606 906 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 TECP42680 631 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 TXKP42681 527 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 SYKP43405 635 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 GCLCP48506 637 aaPredicted RBP9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 SPIRE1Q08AE8 756 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 ZSCAN23Q3MJ62 389 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 LAPTM4BQ86VI4 370 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 PLA2G4DQ86XP0 818 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 FAM133AQ8N9E0 248 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 SHCBP1Q8NEM2 672 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 LRRC15Q8TF66 581 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 RMDN3Q96TC7 470 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 MXRA8Q9BRK3 442 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 MMTAG2Q9BU76 263 aaKnown RBP9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 ZCCHC17Q9NP64 241 aaKnown RBP9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 KCNH3Q9ULD8 1083 aa9.14□□□□□ -0.95
DEPDC4-207ENST00000549249 THSD7BQ9C0I4 1608 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 SOWAHBA6NEL2 793 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 TBX3O15119 743 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 ACTN4O43707 911 aaKnown RBP9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 NR3C2P08235 984 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 BCRP11274 1271 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 MYCLP12524 364 aaPredicted RBP9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 ZNF76P36508 570 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 ALDH5A1P51649 535 aaPredicted RBP9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 SEMA3FQ13275 785 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 TAF1CQ15572 869 aaPredicted RBP9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 FAM110CQ1W6H9 321 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 LONRF3Q496Y0 759 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 CEP55Q53EZ4 464 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 ARHGEF16Q5VV41 709 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 RBM43Q6ZSC3 357 aaKnown RBP9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 NIPA1Q7RTP0 329 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 ANKRD35Q8N283 1001 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 PDILTQ8N807 584 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 GPRC5AQ8NFJ5 357 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 SYAP1Q96A49 352 aaPredicted RBP9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 MMP19Q99542 508 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 WDR11Q9BZH6 1224 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 CCSER1Q9C0I3 900 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 NUP62CLQ9H1M0 184 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 MROH8Q9H579 483 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 TTC12Q9H892 705 aaPredicted RBP9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 FAM13BQ9NYF5 915 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 SERTAD1Q9UHV2 236 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms