RNA–Protein interactions for RNA: ENST00000545668.5

DDX11-229, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-229ENST00000545668 MAGEF1Q9HAY2 307 aa10.74□□□□□ -0.69
DDX11-229ENST00000545668 TMOD2Q9NZR1 351 aa10.74□□□□□ -0.69
DDX11-229ENST00000545668 SAMM50Q9Y512 469 aa10.74□□□□□ -0.69
DDX11-229ENST00000545668 GOLGA6CA6NDK9 693 aa10.74□□□□□ -0.69
DDX11-229ENST00000545668 GOLGA6BA6NDN3 693 aa10.74□□□□□ -0.69
DDX11-229ENST00000545668 TACC1O75410 805 aa10.74□□□□□ -0.69
DDX11-229ENST00000545668 KIF4AO95239 1232 aa10.74□□□□□ -0.69
DDX11-229ENST00000545668 GOLGA6DP0CG33 693 aa10.74□□□□□ -0.69
DDX11-229ENST00000545668 COL11A2P13942 1736 aaPredicted RBP10.74□□□□□ -0.69
DDX11-229ENST00000545668 GBP2P32456 591 aaPredicted RBP10.74□□□□□ -0.69
DDX11-229ENST00000545668 CCT5P48643 541 aa10.74□□□□□ -0.69
DDX11-229ENST00000545668 CKAP4Q07065 602 aaKnown RBP10.74□□□□□ -0.69
DDX11-229ENST00000545668 KCNB1Q14721 858 aa10.74□□□□□ -0.69
DDX11-229ENST00000545668 IQCEQ6IPM2 695 aa10.74□□□□□ -0.69
DDX11-229ENST00000545668 TMEM179Q6ZVK1 233 aa10.74□□□□□ -0.69
DDX11-229ENST00000545668 RRAGAQ7L523 313 aa10.74□□□□□ -0.69
DDX11-229ENST00000545668 CSRNP1Q96S65 589 aa10.74□□□□□ -0.69
DDX11-229ENST00000545668 HAUS4Q9H6D7 363 aa10.74□□□□□ -0.69
DDX11-229ENST00000545668 GOLGA6AQ9NYA3 693 aa10.74□□□□□ -0.69
DDX11-229ENST00000545668 NYAP2Q9P242 653 aa10.74□□□□□ -0.69
DDX11-229ENST00000545668 NRXN2Q9P2S2 1712 aa10.74□□□□□ -0.69
DDX11-229ENST00000545668 H7C1D1 291 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 ATP1A2P50993 1020 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 E2F5Q15329 346 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 QRICH1Q2TAL8 776 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 KRT79Q5XKE5 535 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 SV2BQ7L1I2 683 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 APTXQ7Z2E3 356 aaKnown RBP10.73□□□□□ -0.69
DDX11-229ENST00000545668 ADSSL1Q8N142 457 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 FAM76AQ8TAV0 307 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 IFIH1Q9BYX4 1025 aaKnown RBP10.73□□□□□ -0.69
DDX11-229ENST00000545668 DDX25Q9UHL0 483 aaKnown RBP10.73□□□□□ -0.69
DDX11-229ENST00000545668 POTEMA6NI47 508 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 LRRIQ3A6PVS8 624 aaPredicted RBP10.73□□□□□ -0.69
DDX11-229ENST00000545668 USP17L15C9J2P7 530 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 USP17L13C9JLJ4 530 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 USP17L11C9JVI0 530 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 USP17L18D6R9N7 530 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 USP17L22D6RA61 530 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 USP17L17D6RBQ6 530 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 USP17L19D6RCP7 530 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 USP17L20D6RJB6 530 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 RHOBTB3O94955 611 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 USP17L24Q0WX57 530 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 CCDC40Q4G0X9 1142 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 RBM26Q5T8P6 1007 aaKnown RBP10.73□□□□□ -0.69
DDX11-229ENST00000545668 USP17L6PQ6QN14 398 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 DCAF4Q8WV16 495 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 C7orf43Q8WVR3 580 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 TRIM9Q9C026 710 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 TCP10L2B9ZVM9 353 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 F5H6K3 240 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 EBAG9O00559 213 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 RAD17O75943 681 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 KLRC3Q07444 240 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 LRRC41Q15345 812 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 CDC37Q16543 378 aaPredicted RBP10.73□□□□□ -0.69
DDX11-229ENST00000545668 MB21D1Q8N884 522 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 EHBP1Q8NDI1 1231 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 SNX29Q8TEQ0 813 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 LRRC15Q8TF66 581 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 MTMR9Q96QG7 549 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 CAPN7Q9Y6W3 813 aa10.73□□□□□ -0.69
DDX11-229ENST00000545668 KLRC4O43908 158 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 GH2P01242 217 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 MCM3P25205 808 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 TRIM14Q14142 442 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 ODF2Q5BJF6 829 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 LARGE2Q8N3Y3 721 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 OGFOD1Q8N543 542 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 GIMAP8Q8ND71 665 aaPredicted RBP10.72□□□□□ -0.69
DDX11-229ENST00000545668 MKL1Q969V6 931 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 CNOT6LQ96LI5 555 aaKnown RBP10.72□□□□□ -0.69
DDX11-229ENST00000545668 ALS2CR12Q96Q35 445 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 NHEJ1Q9H9Q4 299 aaPredicted RBP10.72□□□□□ -0.69
DDX11-229ENST00000545668 ADAMTSL1Q8N6G6 1762 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 SHTN1A0MZ66 631 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 CLRN2A0PK11 232 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 NOP2P46087 812 aaKnown RBP10.72□□□□□ -0.69
DDX11-229ENST00000545668 CLNS1AP54105 237 aaKnown RBP10.72□□□□□ -0.69
DDX11-229ENST00000545668 PMS1P54277 932 aaKnown RBP10.72□□□□□ -0.69
DDX11-229ENST00000545668 SNAP25P60880 206 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 KCTD19Q17RG1 926 aaPredicted RBP10.72□□□□□ -0.69
DDX11-229ENST00000545668 TATDN1Q6P1N9 297 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 MAATS1Q7Z4T9 603 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 TTLL6Q8N841 843 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 MMTAG2Q9BU76 263 aaKnown RBP10.72□□□□□ -0.69
DDX11-229ENST00000545668 LIMA1Q9UHB6 759 aaKnown RBP10.72□□□□□ -0.69
DDX11-229ENST00000545668 L1RE1Q9UN81 338 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 SLX4Q8IY92 1834 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 YDJCA8MPS7 323 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 MOCS3O95396 460 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 GGCXP38435 758 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 MAGEA1P43355 309 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 FXR2P51116 673 aaKnown RBP eCLIP10.72□□□□□ -0.69
DDX11-229ENST00000545668 GUCY2FP51841 1108 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 USH1GQ495M9 461 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 FAM71BQ8TC56 605 aa10.72□□□□□ -0.69
DDX11-229ENST00000545668 PDGFDQ9GZP0 370 aaPredicted RBP10.72□□□□□ -0.69
DDX11-229ENST00000545668 GLT8D2Q9H1C3 349 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms