RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 COG2Q14746 738 aa17.03■□□□□ 0.32
CLPTM1-202ENST00000541297 TREML2Q5T2D2 321 aa17.03■□□□□ 0.32
CLPTM1-202ENST00000541297 CATSPERGQ6ZRH7 1159 aa17.03■□□□□ 0.32
CLPTM1-202ENST00000541297 KCNK18Q7Z418 384 aa17.03■□□□□ 0.32
CLPTM1-202ENST00000541297 ZC3H15Q8WU90 426 aaKnown RBP17.03■□□□□ 0.32
CLPTM1-202ENST00000541297 ZCCHC17Q9NP64 241 aaKnown RBP17.03■□□□□ 0.32
CLPTM1-202ENST00000541297 FANCLQ9NW38 375 aa17.03■□□□□ 0.32
CLPTM1-202ENST00000541297 CLEC11AQ9Y240 323 aa17.03■□□□□ 0.32
CLPTM1-202ENST00000541297 PPP2R2CQ9Y2T4 447 aa17.03■□□□□ 0.32
CLPTM1-202ENST00000541297 IGLV3-22A0A075B6J6 115 aa17.02■□□□□ 0.32
CLPTM1-202ENST00000541297 COBLO75128 1261 aa17.02■□□□□ 0.32
CLPTM1-202ENST00000541297 DSG3P32926 999 aa17.02■□□□□ 0.32
CLPTM1-202ENST00000541297 TMEM139Q8IV31 216 aa17.02■□□□□ 0.32
CLPTM1-202ENST00000541297 BLOC1S4Q9NUP1 217 aa17.02■□□□□ 0.32
CLPTM1-202ENST00000541297 DACH1Q9UI36 760 aa17.02■□□□□ 0.32
CLPTM1-202ENST00000541297 ZSCAN12O43309 604 aa17.02■□□□□ 0.31
CLPTM1-202ENST00000541297 CCT6AP40227 531 aaKnown RBP17.02■□□□□ 0.31
CLPTM1-202ENST00000541297 STX17P56962 302 aa17.02■□□□□ 0.31
CLPTM1-202ENST00000541297 MAPK8IP2Q13387 824 aaPredicted RBP17.02■□□□□ 0.31
CLPTM1-202ENST00000541297 MCM6Q14566 821 aa17.02■□□□□ 0.31
CLPTM1-202ENST00000541297 TEX35Q5T0J7 233 aa17.02■□□□□ 0.31
CLPTM1-202ENST00000541297 NCAPH2Q6IBW4 605 aa17.02■□□□□ 0.31
CLPTM1-202ENST00000541297 SNRNP48Q6IEG0 339 aaKnown RBP17.02■□□□□ 0.31
CLPTM1-202ENST00000541297 NSMFQ6X4W1 530 aa17.02■□□□□ 0.31
CLPTM1-202ENST00000541297 PAXIP1Q6ZW49 1069 aaPredicted RBP17.02■□□□□ 0.31
CLPTM1-202ENST00000541297 NEK11Q8NG66 645 aa17.02■□□□□ 0.31
CLPTM1-202ENST00000541297 PURBQ96QR8 312 aaKnown RBP17.02■□□□□ 0.31
CLPTM1-202ENST00000541297 MAPK8IP1Q9UQF2 711 aa17.02■□□□□ 0.31
CLPTM1-202ENST00000541297 TULP2O00295 520 aa17.01■□□□□ 0.31
CLPTM1-202ENST00000541297 IRF6O14896 467 aa17.01■□□□□ 0.31
CLPTM1-202ENST00000541297 TBC1D8O95759 1140 aa17.01■□□□□ 0.31
CLPTM1-202ENST00000541297 CAPN2P17655 700 aa17.01■□□□□ 0.31
CLPTM1-202ENST00000541297 RPS6P62753 249 aaKnown RBP17.01■□□□□ 0.31
CLPTM1-202ENST00000541297 PLS1Q14651 629 aa17.01■□□□□ 0.31
CLPTM1-202ENST00000541297 MCF2L2Q86YR7 1114 aa17.01■□□□□ 0.31
CLPTM1-202ENST00000541297 MED15Q96RN5 788 aa17.01■□□□□ 0.31
CLPTM1-202ENST00000541297 WDR24Q96S15 920 aa17.01■□□□□ 0.31
CLPTM1-202ENST00000541297 CUEDC2Q9H467 287 aa17.01■□□□□ 0.31
CLPTM1-202ENST00000541297 EHMT1Q9H9B1 1298 aa17.01■□□□□ 0.31
CLPTM1-202ENST00000541297 GDAQ9Y2T3 454 aa17.01■□□□□ 0.31
CLPTM1-202ENST00000541297 IQCA1LA6NCM1 817 aa17.01■□□□□ 0.31
CLPTM1-202ENST00000541297 PEX10O60683 326 aa17.01■□□□□ 0.31
CLPTM1-202ENST00000541297 SPIRE1Q08AE8 756 aa17.01■□□□□ 0.31
CLPTM1-202ENST00000541297 TMEM132BQ14DG7 1078 aa17.01■□□□□ 0.31
CLPTM1-202ENST00000541297 IL31RAQ8NI17 732 aa17.01■□□□□ 0.31
CLPTM1-202ENST00000541297 LARP4BQ92615 738 aaKnown RBP17.01■□□□□ 0.31
CLPTM1-202ENST00000541297 RNF146Q9NTX7 359 aa17.01■□□□□ 0.31
CLPTM1-202ENST00000541297 INTS13Q9NVM9 706 aa17.01■□□□□ 0.31
CLPTM1-202ENST00000541297 ZC3H4Q9UPT8 1303 aaKnown RBP17.01■□□□□ 0.31
CLPTM1-202ENST00000541297 POTEB3A0JP26 581 aa17■□□□□ 0.31
CLPTM1-202ENST00000541297 TPM1P09493 284 aa17■□□□□ 0.31
CLPTM1-202ENST00000541297 CDK11BP21127 795 aaKnown RBP17■□□□□ 0.31
CLPTM1-202ENST00000541297 POTEBQ6S5H4 581 aa17■□□□□ 0.31
CLPTM1-202ENST00000541297 GADL1Q6ZQY3 521 aa17■□□□□ 0.31
CLPTM1-202ENST00000541297 ANKRD13AQ8IZ07 590 aa17■□□□□ 0.31
CLPTM1-202ENST00000541297 REPS2Q8NFH8 660 aa17■□□□□ 0.31
CLPTM1-202ENST00000541297 RBM46Q8TBY0 533 aaKnown RBP17■□□□□ 0.31
CLPTM1-202ENST00000541297 UBXN6Q9BZV1 441 aa17■□□□□ 0.31
CLPTM1-202ENST00000541297 TRIM9Q9C026 710 aa17■□□□□ 0.31
CLPTM1-202ENST00000541297 ZNF408Q9H9D4 720 aa17■□□□□ 0.31
CLPTM1-202ENST00000541297 ZNF214Q9UL59 606 aaPredicted RBP17■□□□□ 0.31
CLPTM1-202ENST00000541297 SPDYE16A6NNV3 312 aaPredicted RBP17■□□□□ 0.31
CLPTM1-202ENST00000541297 TBX3O15119 743 aa17■□□□□ 0.31
CLPTM1-202ENST00000541297 ARHGAP6O43182 974 aa17■□□□□ 0.31
CLPTM1-202ENST00000541297 CASQ1P31415 396 aa17■□□□□ 0.31
CLPTM1-202ENST00000541297 GNG11P61952 73 aa17■□□□□ 0.31
CLPTM1-202ENST00000541297 CEP55Q53EZ4 464 aa17■□□□□ 0.31
CLPTM1-202ENST00000541297 CC2D1AQ6P1N0 951 aaPredicted RBP17■□□□□ 0.31
CLPTM1-202ENST00000541297 SV2BQ7L1I2 683 aa17■□□□□ 0.31
CLPTM1-202ENST00000541297 SYTL5Q8TDW5 730 aaPredicted RBP17■□□□□ 0.31
CLPTM1-202ENST00000541297 TAAR1Q96RJ0 339 aa17■□□□□ 0.31
CLPTM1-202ENST00000541297 KIAA1024Q9UPX6 916 aa17■□□□□ 0.31
CLPTM1-202ENST00000541297 NFE2L3Q9Y4A8 694 aa17■□□□□ 0.31
CLPTM1-202ENST00000541297 PPP1R3GB7ZBB8 358 aa16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 KLRC4O43908 158 aa16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 EIF2AK2P19525 551 aaKnown RBP16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 ASIC1P78348 528 aa16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 SH3D19Q5HYK7 790 aa16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 MAP1SQ66K74 1059 aaPredicted RBP16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 RNF207Q6ZRF8 634 aa16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 DYMQ7RTS9 669 aa16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 RAD54LQ92698 747 aa16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 FAM20AQ96MK3 541 aa16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 MAGEF1Q9HAY2 307 aa16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 RMND1Q9NWS8 449 aa16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 CTNND2Q9UQB3 1225 aa16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 TRAF5O00463 557 aa16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 ATP8B1O43520 1251 aa16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 CHMP2AO43633 222 aa16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 MED24O75448 989 aa16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 FDX1P10109 184 aa16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 ARP10275 920 aa16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 OAS2P29728 719 aaKnown RBP16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 TMEM119Q4V9L6 283 aa16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 ZNF658Q5TYW1 1059 aaPredicted RBP16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 PKD2L1Q9P0L9 805 aa16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 STK17AQ9UEE5 414 aa16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 ADAMTS5Q9UNA0 930 aa16.99■□□□□ 0.31
CLPTM1-202ENST00000541297 E9PMD0 336 aa16.98■□□□□ 0.31
CLPTM1-202ENST00000541297 TEX2Q8IWB9 1127 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms