RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 MLXIPQ9HAP2 919 aa16.28■□□□□ 0.2
SMARCA4-206ENST00000538456 PCDHA1Q9Y5I3 950 aa16.28■□□□□ 0.2
SMARCA4-206ENST00000538456 KLRF2D3W0D1 207 aa16.27■□□□□ 0.2
SMARCA4-206ENST00000538456 H3BRB1 525 aa16.27■□□□□ 0.2
SMARCA4-206ENST00000538456 ALADP13716 330 aa16.27■□□□□ 0.2
SMARCA4-206ENST00000538456 CCND2P30279 289 aa16.27■□□□□ 0.2
SMARCA4-206ENST00000538456 IFIT1BQ5T764 474 aaKnown RBP16.27■□□□□ 0.2
SMARCA4-206ENST00000538456 STOX1Q6ZVD7 989 aa16.27■□□□□ 0.2
SMARCA4-206ENST00000538456 HOMER1Q86YM7 354 aa16.27■□□□□ 0.2
SMARCA4-206ENST00000538456 SAMD11Q96NU1 681 aa16.27■□□□□ 0.2
SMARCA4-206ENST00000538456 IFIH1Q9BYX4 1025 aaKnown RBP16.27■□□□□ 0.2
SMARCA4-206ENST00000538456 TUT1Q9H6E5 874 aaKnown RBP16.27■□□□□ 0.2
SMARCA4-206ENST00000538456 BCAS3Q9H6U6 928 aa16.27■□□□□ 0.2
SMARCA4-206ENST00000538456 DIAPH3Q9NSV4 1193 aa16.27■□□□□ 0.2
SMARCA4-206ENST00000538456 H3BNC9 293 aa16.26■□□□□ 0.19
SMARCA4-206ENST00000538456 ZBTB5O15062 677 aa16.26■□□□□ 0.19
SMARCA4-206ENST00000538456 LGALS2P05162 132 aa16.26■□□□□ 0.19
SMARCA4-206ENST00000538456 NT5C2P49902 561 aa16.26■□□□□ 0.19
SMARCA4-206ENST00000538456 RRP1P56182 461 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-206ENST00000538456 GHRHRQ02643 423 aa16.26■□□□□ 0.19
SMARCA4-206ENST00000538456 HDAC1Q13547 482 aaPredicted RBP16.26■□□□□ 0.19
SMARCA4-206ENST00000538456 IMMTQ16891 758 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-206ENST00000538456 PUS10Q3MIT2 529 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-206ENST00000538456 VSIG10LQ86VR7 867 aa16.26■□□□□ 0.19
SMARCA4-206ENST00000538456 FCHSD1Q86WN1 690 aa16.26■□□□□ 0.19
SMARCA4-206ENST00000538456 TMEM192Q8IY95 271 aa16.26■□□□□ 0.19
SMARCA4-206ENST00000538456 TOP1MTQ969P6 601 aa16.26■□□□□ 0.19
SMARCA4-206ENST00000538456 PABPC5Q96DU9 382 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-206ENST00000538456 COL4A6Q14031 1691 aa16.26■□□□□ 0.19
SMARCA4-206ENST00000538456 KAT6AQ92794 2004 aa16.25■□□□□ 0.19
SMARCA4-206ENST00000538456 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.25■□□□□ 0.19
SMARCA4-206ENST00000538456 NOP56O00567 594 aaKnown RBP16.25■□□□□ 0.19
SMARCA4-206ENST00000538456 DCXO43602 365 aa16.25■□□□□ 0.19
SMARCA4-206ENST00000538456 TGFB3P10600 412 aa16.25■□□□□ 0.19
SMARCA4-206ENST00000538456 HOXC8P31273 242 aa16.25■□□□□ 0.19
SMARCA4-206ENST00000538456 B4GALNT3Q6L9W6 998 aa16.25■□□□□ 0.19
SMARCA4-206ENST00000538456 TRIM50Q86XT4 487 aa16.25■□□□□ 0.19
SMARCA4-206ENST00000538456 KRT23Q9C075 422 aa16.25■□□□□ 0.19
SMARCA4-206ENST00000538456 RNPEPQ9H4A4 650 aa16.25■□□□□ 0.19
SMARCA4-206ENST00000538456 NSUN3Q9H649 340 aaKnown RBP16.25■□□□□ 0.19
SMARCA4-206ENST00000538456 SETD4Q9NVD3 440 aa16.25■□□□□ 0.19
SMARCA4-206ENST00000538456 CLDND1Q9NY35 253 aa16.25■□□□□ 0.19
SMARCA4-206ENST00000538456 TRIOO75962 3097 aa16.25■□□□□ 0.19
SMARCA4-206ENST00000538456 GCOM1H8Y6P7 765 aaPredicted RBP16.24■□□□□ 0.19
SMARCA4-206ENST00000538456 CSPG5O95196 566 aa16.24■□□□□ 0.19
SMARCA4-206ENST00000538456 POLR2MP0CAP2 368 aa16.24■□□□□ 0.19
SMARCA4-206ENST00000538456 CTNNB1P35222 781 aa16.24■□□□□ 0.19
SMARCA4-206ENST00000538456 ZP2Q05996 745 aa16.24■□□□□ 0.19
SMARCA4-206ENST00000538456 MTMR8Q96EF0 704 aa16.24■□□□□ 0.19
SMARCA4-206ENST00000538456 MAP3K20Q9NYL2 800 aaKnown RBP16.24■□□□□ 0.19
SMARCA4-206ENST00000538456 MAD2L2Q9UI95 211 aa16.24■□□□□ 0.19
SMARCA4-206ENST00000538456 FAM50BQ9Y247 325 aa16.24■□□□□ 0.19
SMARCA4-206ENST00000538456 CAND2O75155 1236 aa16.23■□□□□ 0.19
SMARCA4-206ENST00000538456 SP4Q02446 784 aa16.23■□□□□ 0.19
SMARCA4-206ENST00000538456 CLUL1Q15846 466 aa16.23■□□□□ 0.19
SMARCA4-206ENST00000538456 PIGSQ96S52 555 aa16.23■□□□□ 0.19
SMARCA4-206ENST00000538456 DSCC1Q9BVC3 393 aa16.23■□□□□ 0.19
SMARCA4-206ENST00000538456 CNNM2Q9H8M5 875 aa16.23■□□□□ 0.19
SMARCA4-206ENST00000538456 ARHGAP4P98171 946 aa16.22■□□□□ 0.19
SMARCA4-206ENST00000538456 SEC23AQ15436 765 aa16.22■□□□□ 0.19
SMARCA4-206ENST00000538456 SLC35G1Q2M3R5 365 aa16.22■□□□□ 0.19
SMARCA4-206ENST00000538456 GNPTABQ3T906 1256 aa16.22■□□□□ 0.19
SMARCA4-206ENST00000538456 UTP14CQ5TAP6 766 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-206ENST00000538456 CYFIP1Q7L576 1253 aa16.22■□□□□ 0.19
SMARCA4-206ENST00000538456 RPAINQ86UA6 219 aa16.22■□□□□ 0.19
SMARCA4-206ENST00000538456 FIBCD1Q8N539 461 aa16.22■□□□□ 0.19
SMARCA4-206ENST00000538456 LMBR1Q8WVP7 490 aa16.22■□□□□ 0.19
SMARCA4-206ENST00000538456 IL17RAQ96F46 866 aa16.22■□□□□ 0.19
SMARCA4-206ENST00000538456 USP26Q9BXU7 913 aa16.22■□□□□ 0.19
SMARCA4-206ENST00000538456 TELO2Q9Y4R8 837 aa16.22■□□□□ 0.19
SMARCA4-206ENST00000538456 SUPT16HQ9Y5B9 1047 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-206ENST00000538456 ZNF318Q5VUA4 2279 aa16.21■□□□□ 0.19
SMARCA4-206ENST00000538456 PALM3A6NDB9 673 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-206ENST00000538456 GNAT1P11488 350 aa16.21■□□□□ 0.19
SMARCA4-206ENST00000538456 MRE11P49959 708 aa16.21■□□□□ 0.19
SMARCA4-206ENST00000538456 MRPS9P82933 396 aaKnown RBP16.21■□□□□ 0.19
SMARCA4-206ENST00000538456 COL19A1Q14993 1142 aa16.21■□□□□ 0.19
SMARCA4-206ENST00000538456 METTL7BQ6UX53 244 aa16.21■□□□□ 0.19
SMARCA4-206ENST00000538456 CYB5R4Q7L1T6 521 aa16.21■□□□□ 0.19
SMARCA4-206ENST00000538456 PLEKHM2Q8IWE5 1019 aa16.21■□□□□ 0.19
SMARCA4-206ENST00000538456 ADHFE1Q8IWW8 467 aa16.21■□□□□ 0.19
SMARCA4-206ENST00000538456 SAMD3Q8N6K7 520 aa16.21■□□□□ 0.19
SMARCA4-206ENST00000538456 APBB2Q92870 758 aa16.21■□□□□ 0.19
SMARCA4-206ENST00000538456 GPR20Q99678 358 aa16.21■□□□□ 0.19
SMARCA4-206ENST00000538456 RTEL1Q9NZ71 1219 aa16.21■□□□□ 0.19
SMARCA4-206ENST00000538456 PRKAG3Q9UGI9 489 aa16.21■□□□□ 0.19
SMARCA4-206ENST00000538456 ZNF215Q9UL58 517 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-206ENST00000538456 POTEB3A0JP26 581 aa16.2■□□□□ 0.18
SMARCA4-206ENST00000538456 GRM6O15303 877 aa16.2■□□□□ 0.18
SMARCA4-206ENST00000538456 GHRP10912 638 aa16.2■□□□□ 0.18
SMARCA4-206ENST00000538456 IRS1P35568 1242 aa16.2■□□□□ 0.18
SMARCA4-206ENST00000538456 LTBRP36941 435 aa16.2■□□□□ 0.18
SMARCA4-206ENST00000538456 NHLH1Q02575 133 aa16.2■□□□□ 0.18
SMARCA4-206ENST00000538456 SEMA3FQ13275 785 aa16.2■□□□□ 0.18
SMARCA4-206ENST00000538456 NEDD9Q14511 834 aa16.2■□□□□ 0.18
SMARCA4-206ENST00000538456 POTEBQ6S5H4 581 aa16.2■□□□□ 0.18
SMARCA4-206ENST00000538456 PIBF1Q8WXW3 757 aa16.2■□□□□ 0.18
SMARCA4-206ENST00000538456 FBXL18Q96ME1 805 aa16.2■□□□□ 0.18
SMARCA4-206ENST00000538456 INPP4AQ96PE3 977 aaPredicted RBP16.2■□□□□ 0.18
SMARCA4-206ENST00000538456 C11orf84Q9BUA3 381 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms