RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 ACRBPQ8NEB7 543 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 CNOT6LQ96LI5 555 aaKnown RBP12.81□□□□□ -0.36
USP35-207ENST00000530546 TUBGCP2Q9BSJ2 902 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 TBC1D7Q9P0N9 293 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 ZNF70Q9UC06 446 aaPredicted RBP12.81□□□□□ -0.36
USP35-207ENST00000530546 SIPA1L1O43166 1804 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 LGALS16A8MUM7 142 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 E9PMD0 336 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 MEIS2O14770 477 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 NKRFO15226 690 aaKnown RBP eCLIP12.81□□□□□ -0.36
USP35-207ENST00000530546 EEF1GP26641 437 aaKnown RBP12.81□□□□□ -0.36
USP35-207ENST00000530546 SEMA6BQ9H3T3 888 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 ABHD10Q9NUJ1 306 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 KIAA1024Q9UPX6 916 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 ITIH6Q6UXX5 1313 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 BICDL2A1A5D9 508 aa12.8□□□□□ -0.36
USP35-207ENST00000530546 NPM3O75607 178 aaKnown RBP12.8□□□□□ -0.36
USP35-207ENST00000530546 GCFC2P16383 781 aaKnown RBP12.8□□□□□ -0.36
USP35-207ENST00000530546 KLK7P49862 253 aa12.8□□□□□ -0.36
USP35-207ENST00000530546 ARHGAP4P98171 946 aa12.8□□□□□ -0.36
USP35-207ENST00000530546 UNC13DQ70J99 1090 aa12.8□□□□□ -0.36
USP35-207ENST00000530546 CCDC84Q86UT8 332 aaPredicted RBP12.8□□□□□ -0.36
USP35-207ENST00000530546 HDAC9Q9UKV0 1011 aa12.8□□□□□ -0.36
USP35-207ENST00000530546 ADGRG1Q9Y653 693 aa12.8□□□□□ -0.36
USP35-207ENST00000530546 POTEB3A0JP26 581 aa12.8□□□□□ -0.36
USP35-207ENST00000530546 POTECB2RU33 542 aa12.8□□□□□ -0.36
USP35-207ENST00000530546 ERVK-24P63145 666 aa12.8□□□□□ -0.36
USP35-207ENST00000530546 KIAA1755Q5JYT7 1200 aa12.8□□□□□ -0.36
USP35-207ENST00000530546 CCDC174Q6PII3 467 aa12.8□□□□□ -0.36
USP35-207ENST00000530546 POTEBQ6S5H4 581 aa12.8□□□□□ -0.36
USP35-207ENST00000530546 GMCL1P1Q8NEA9 526 aa12.8□□□□□ -0.36
USP35-207ENST00000530546 TMEM39BQ9GZU3 492 aa12.8□□□□□ -0.36
USP35-207ENST00000530546 NPHP3-ACAD11A0A0J9YXS1 232 aa12.79□□□□□ -0.36
USP35-207ENST00000530546 TTC26A0AVF1 554 aa12.79□□□□□ -0.36
USP35-207ENST00000530546 SPDYE3A6NKU9 549 aa12.79□□□□□ -0.36
USP35-207ENST00000530546 ERLIN2O94905 339 aa12.79□□□□□ -0.36
USP35-207ENST00000530546 TMEM119Q4V9L6 283 aa12.79□□□□□ -0.36
USP35-207ENST00000530546 MICALL1Q8N3F8 863 aa12.79□□□□□ -0.36
USP35-207ENST00000530546 GMCL1Q96IK5 515 aa12.79□□□□□ -0.36
USP35-207ENST00000530546 NAA15Q9BXJ9 866 aaKnown RBP12.79□□□□□ -0.36
USP35-207ENST00000530546 ZHX3Q9H4I2 956 aa12.79□□□□□ -0.36
USP35-207ENST00000530546 PRR12Q9ULL5 1215 aa12.79□□□□□ -0.36
USP35-207ENST00000530546 C10orf71Q711Q0 1435 aa12.79□□□□□ -0.36
USP35-207ENST00000530546 TNS1Q9HBL0 1735 aaKnown RBP12.79□□□□□ -0.36
USP35-207ENST00000530546 N4BP1O75113 896 aaKnown RBP12.79□□□□□ -0.36
USP35-207ENST00000530546 TBC1D8BQ0IIM8 1120 aa12.79□□□□□ -0.36
USP35-207ENST00000530546 CASP8Q14790 479 aa12.79□□□□□ -0.36
USP35-207ENST00000530546 FAM83BQ5T0W9 1011 aa12.79□□□□□ -0.36
USP35-207ENST00000530546 RTKN2Q8IZC4 609 aa12.79□□□□□ -0.36
USP35-207ENST00000530546 CHP1Q99653 195 aa12.79□□□□□ -0.36
USP35-207ENST00000530546 NOC4LQ9BVI4 516 aaKnown RBP12.79□□□□□ -0.36
USP35-207ENST00000530546 GLT8D2Q9H1C3 349 aa12.79□□□□□ -0.36
USP35-207ENST00000530546 VIPAS39Q9H9C1 493 aa12.79□□□□□ -0.36
USP35-207ENST00000530546 SUFUQ9UMX1 484 aa12.79□□□□□ -0.36
USP35-207ENST00000530546 ATRNL1Q5VV63 1379 aa12.79□□□□□ -0.36
USP35-207ENST00000530546 NCAPH2Q6IBW4 605 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 GPIHBP1Q8IV16 184 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 NOC3LQ8WTT2 800 aaKnown RBP12.78□□□□□ -0.36
USP35-207ENST00000530546 CCDC102AQ96A19 550 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 SLF1Q9BQI6 1058 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 FAM204AQ9H8W3 233 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 ARHGEF10LQ9HCE6 1279 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 GREB1LQ9C091 1923 aaPredicted RBP12.78□□□□□ -0.36
USP35-207ENST00000530546 MEIS1O00470 390 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 SF3B2Q13435 895 aaKnown RBP12.78□□□□□ -0.36
USP35-207ENST00000530546 SLC30A10Q6XR72 485 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 CEP120Q8N960 986 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 CCDC51Q96ER9 411 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 ABCB6Q9NP58 842 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 PPP1R1BQ9UD71 204 aaPredicted RBP12.78□□□□□ -0.36
USP35-207ENST00000530546 CDC23Q9UJX2 597 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 PVALEFA0A1B0GWK0 134 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 POTEFA5A3E0 1075 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 VIL1P09327 827 aaKnown RBP12.78□□□□□ -0.36
USP35-207ENST00000530546 POTEIP0CG38 1075 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 ZNF76P36508 570 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 AARSP49588 968 aaKnown RBP eCLIP12.78□□□□□ -0.36
USP35-207ENST00000530546 USP11P51784 963 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 TRIM14Q14142 442 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 POTEGQ6S5H5 508 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 POTEEQ6S8J3 1075 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 TMTC1Q8IUR5 882 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 CYP2W1Q8TAV3 490 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 ZNF507Q8TCN5 953 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 AFAP1L1Q8TED9 768 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 FAM151AQ8WW52 585 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 TBC1D5Q92609 795 aa12.78□□□□□ -0.36
USP35-207ENST00000530546 HERC5Q9UII4 1024 aaKnown RBP12.78□□□□□ -0.36
USP35-207ENST00000530546 LUC7L2Q9Y383 392 aaKnown RBP12.78□□□□□ -0.36
USP35-207ENST00000530546 MYH7BA7E2Y1 1941 aa12.77□□□□□ -0.36
USP35-207ENST00000530546 SHTN1A0MZ66 631 aa12.77□□□□□ -0.36
USP35-207ENST00000530546 MED24O75448 989 aa12.77□□□□□ -0.36
USP35-207ENST00000530546 ABL1P00519 1130 aa12.77□□□□□ -0.36
USP35-207ENST00000530546 CFBP00751 764 aa12.77□□□□□ -0.36
USP35-207ENST00000530546 KRT18P05783 430 aaKnown RBP12.77□□□□□ -0.36
USP35-207ENST00000530546 PLA2G4BP0C869 781 aa12.77□□□□□ -0.36
USP35-207ENST00000530546 TRIM21P19474 475 aaKnown RBP12.77□□□□□ -0.36
USP35-207ENST00000530546 DNM2P50570 870 aa12.77□□□□□ -0.36
USP35-207ENST00000530546 STAT2P52630 851 aa12.77□□□□□ -0.36
USP35-207ENST00000530546 UBXN2AP68543 259 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms