RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 ZRANB2O95218 330 aaKnown RBP eCLIP16.33■□□□□ 0.2
NR1H3-231ENST00000529540 TAL1P17542 331 aaPredicted RBP16.33■□□□□ 0.2
NR1H3-231ENST00000529540 CLCN6P51797 869 aa16.33■□□□□ 0.2
NR1H3-231ENST00000529540 MAP2K1Q02750 393 aaPredicted RBP16.33■□□□□ 0.2
NR1H3-231ENST00000529540 INF2Q27J81 1249 aa16.33■□□□□ 0.2
NR1H3-231ENST00000529540 TRIM65Q6PJ69 517 aa16.33■□□□□ 0.2
NR1H3-231ENST00000529540 VSTM4Q8IW00 320 aa16.33■□□□□ 0.2
NR1H3-231ENST00000529540 NSUN6Q8TEA1 469 aaKnown RBP16.33■□□□□ 0.2
NR1H3-231ENST00000529540 ARGLU1Q9NWB6 273 aaPredicted RBP16.33■□□□□ 0.2
NR1H3-231ENST00000529540 TMEM260Q9NX78 707 aa16.33■□□□□ 0.2
NR1H3-231ENST00000529540 DNAI1Q9UI46 699 aa16.33■□□□□ 0.2
NR1H3-231ENST00000529540 FRMPD4Q14CM0 1322 aa16.33■□□□□ 0.2
NR1H3-231ENST00000529540 POTEB2H3BUK9 544 aa16.32■□□□□ 0.2
NR1H3-231ENST00000529540 LAD1O00515 517 aa16.32■□□□□ 0.2
NR1H3-231ENST00000529540 STAM2O75886 525 aa16.32■□□□□ 0.2
NR1H3-231ENST00000529540 CYP3A4P08684 503 aa16.32■□□□□ 0.2
NR1H3-231ENST00000529540 SYKP43405 635 aa16.32■□□□□ 0.2
NR1H3-231ENST00000529540 ARHGAP4P98171 946 aa16.32■□□□□ 0.2
NR1H3-231ENST00000529540 TTC38Q5R3I4 469 aa16.32■□□□□ 0.2
NR1H3-231ENST00000529540 PPP4R3AQ6IN85 833 aa16.32■□□□□ 0.2
NR1H3-231ENST00000529540 SLC30A10Q6XR72 485 aa16.32■□□□□ 0.2
NR1H3-231ENST00000529540 PLEKHH3Q7Z736 793 aa16.32■□□□□ 0.2
NR1H3-231ENST00000529540 IWS1Q96ST2 819 aa16.32■□□□□ 0.2
NR1H3-231ENST00000529540 RMDN3Q96TC7 470 aa16.32■□□□□ 0.2
NR1H3-231ENST00000529540 BEGAINQ9BUH8 593 aa16.32■□□□□ 0.2
NR1H3-231ENST00000529540 BIN1O00499 593 aa16.31■□□□□ 0.2
NR1H3-231ENST00000529540 TADA3O75528 432 aa16.31■□□□□ 0.2
NR1H3-231ENST00000529540 KIF22Q14807 665 aa16.31■□□□□ 0.2
NR1H3-231ENST00000529540 PTPAQ15257 358 aa16.31■□□□□ 0.2
NR1H3-231ENST00000529540 ARHGEF16Q5VV41 709 aa16.31■□□□□ 0.2
NR1H3-231ENST00000529540 GPR142Q7Z601 462 aa16.31■□□□□ 0.2
NR1H3-231ENST00000529540 REXO1L1PQ8IX06 675 aa16.31■□□□□ 0.2
NR1H3-231ENST00000529540 LRRN4CLQ8ND94 238 aa16.31■□□□□ 0.2
NR1H3-231ENST00000529540 TBC1D5Q92609 795 aa16.31■□□□□ 0.2
NR1H3-231ENST00000529540 PORCNQ9H237 461 aa16.31■□□□□ 0.2
NR1H3-231ENST00000529540 EFCC1Q9HA90 598 aa16.31■□□□□ 0.2
NR1H3-231ENST00000529540 RPTORQ8N122 1335 aa16.31■□□□□ 0.2
NR1H3-231ENST00000529540 GOLGA6L9A6NEM1 432 aa16.3■□□□□ 0.2
NR1H3-231ENST00000529540 SLC15A5A6NIM6 579 aa16.3■□□□□ 0.2
NR1H3-231ENST00000529540 ZSCAN12O43309 604 aa16.3■□□□□ 0.2
NR1H3-231ENST00000529540 PNMA6AP0CW24 399 aaPredicted RBP16.3■□□□□ 0.2
NR1H3-231ENST00000529540 UBASH3AP57075 661 aa16.3■□□□□ 0.2
NR1H3-231ENST00000529540 LETM2Q2VYF4 491 aa16.3■□□□□ 0.2
NR1H3-231ENST00000529540 ARHGAP29Q52LW3 1261 aa16.3■□□□□ 0.2
NR1H3-231ENST00000529540 NOM1Q5C9Z4 860 aaKnown RBP16.3■□□□□ 0.2
NR1H3-231ENST00000529540 EARS2Q5JPH6 523 aaKnown RBP16.3■□□□□ 0.2
NR1H3-231ENST00000529540 RESP18Q5W5W9 173 aa16.3■□□□□ 0.2
NR1H3-231ENST00000529540 PCNX4Q63HM2 1172 aa16.3■□□□□ 0.2
NR1H3-231ENST00000529540 CRYGNQ8WXF5 182 aa16.3■□□□□ 0.2
NR1H3-231ENST00000529540 SOCS4Q8WXH5 440 aa16.3■□□□□ 0.2
NR1H3-231ENST00000529540 PXMP2Q9NR77 195 aa16.3■□□□□ 0.2
NR1H3-231ENST00000529540 DIS3Q9Y2L1 958 aaKnown RBP16.3■□□□□ 0.2
NR1H3-231ENST00000529540 EFCAB8A8MWE9 144 aa16.3■□□□□ 0.2
NR1H3-231ENST00000529540 CCNT1O60563 726 aaKnown RBP16.3■□□□□ 0.2
NR1H3-231ENST00000529540 CUTAO60888 179 aa16.3■□□□□ 0.2
NR1H3-231ENST00000529540 PTPREP23469 700 aa16.3■□□□□ 0.2
NR1H3-231ENST00000529540 CIITAP33076 1130 aa16.3■□□□□ 0.2
NR1H3-231ENST00000529540 HTRA3P83110 453 aa16.3■□□□□ 0.2
NR1H3-231ENST00000529540 SETQ01105 290 aaPredicted RBP16.3■□□□□ 0.2
NR1H3-231ENST00000529540 GRB14Q14449 540 aa16.3■□□□□ 0.2
NR1H3-231ENST00000529540 ARHGEF6Q15052 776 aa16.3■□□□□ 0.2
NR1H3-231ENST00000529540 FAM133AQ8N9E0 248 aa16.3■□□□□ 0.2
NR1H3-231ENST00000529540 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.3■□□□□ 0.2
NR1H3-231ENST00000529540 RNF186Q9NXI6 227 aa16.3■□□□□ 0.2
NR1H3-231ENST00000529540 DNAJC25-GNG10A0A024R161 153 aa16.29■□□□□ 0.2
NR1H3-231ENST00000529540 CYP3A7-CYP3A51PA0A087WV96 503 aa16.29■□□□□ 0.2
NR1H3-231ENST00000529540 ADAMTS3O15072 1205 aa16.29■□□□□ 0.2
NR1H3-231ENST00000529540 ARHGAP6O43182 974 aa16.29■□□□□ 0.2
NR1H3-231ENST00000529540 PEX10O60683 326 aa16.29■□□□□ 0.2
NR1H3-231ENST00000529540 ATP1A3P13637 1013 aa16.29■□□□□ 0.2
NR1H3-231ENST00000529540 CYP3A7P24462 503 aa16.29■□□□□ 0.2
NR1H3-231ENST00000529540 CCND2P30279 289 aa16.29■□□□□ 0.2
NR1H3-231ENST00000529540 ZNF76P36508 570 aa16.29■□□□□ 0.2
NR1H3-231ENST00000529540 TOB1P50616 345 aaPredicted RBP16.29■□□□□ 0.2
NR1H3-231ENST00000529540 FCGRTP55899 365 aa16.29■□□□□ 0.2
NR1H3-231ENST00000529540 TBX2Q13207 712 aaPredicted RBP16.29■□□□□ 0.2
NR1H3-231ENST00000529540 SHC4Q6S5L8 630 aa16.29■□□□□ 0.2
NR1H3-231ENST00000529540 TMEM139Q8IV31 216 aa16.29■□□□□ 0.2
NR1H3-231ENST00000529540 UBXN4Q92575 508 aa16.29■□□□□ 0.2
NR1H3-231ENST00000529540 PDCD2LQ9BRP1 358 aa16.29■□□□□ 0.2
NR1H3-231ENST00000529540 COL20A1Q9P218 1284 aa16.29■□□□□ 0.2
NR1H3-231ENST00000529540 ZNF236Q9UL36 1845 aa16.29■□□□□ 0.2
NR1H3-231ENST00000529540 SMCHD1A6NHR9 2005 aa16.29■□□□□ 0.2
NR1H3-231ENST00000529540 FAM205CA6NFA0 338 aa16.28■□□□□ 0.2
NR1H3-231ENST00000529540 TRPA1O75762 1119 aa16.28■□□□□ 0.2
NR1H3-231ENST00000529540 ATP2B1P20020 1258 aa16.28■□□□□ 0.2
NR1H3-231ENST00000529540 CYP2C19P33261 490 aa16.28■□□□□ 0.2
NR1H3-231ENST00000529540 PLA2G4AP47712 749 aa16.28■□□□□ 0.2
NR1H3-231ENST00000529540 PGM5Q15124 567 aa16.28■□□□□ 0.2
NR1H3-231ENST00000529540 ARL6IP4Q66PJ3 421 aaKnown RBP16.28■□□□□ 0.2
NR1H3-231ENST00000529540 TMCO3Q6UWJ1 677 aa16.28■□□□□ 0.2
NR1H3-231ENST00000529540 NIPA1Q7RTP0 329 aa16.28■□□□□ 0.2
NR1H3-231ENST00000529540 ZNF467Q7Z7K2 595 aaPredicted RBP16.28■□□□□ 0.2
NR1H3-231ENST00000529540 MNS1Q8NEH6 495 aa16.28■□□□□ 0.2
NR1H3-231ENST00000529540 TAAR1Q96RJ0 339 aa16.28■□□□□ 0.2
NR1H3-231ENST00000529540 UBXN6Q9BZV1 441 aa16.28■□□□□ 0.2
NR1H3-231ENST00000529540 CALCOCO1Q9P1Z2 691 aa16.28■□□□□ 0.2
NR1H3-231ENST00000529540 ASB14A6NK59 587 aa16.27■□□□□ 0.2
NR1H3-231ENST00000529540 TNPO2O14787 897 aaKnown RBP16.27■□□□□ 0.2
NR1H3-231ENST00000529540 MAFGO15525 162 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms