RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 ITGA4P13612 1032 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 TIMP2P16035 220 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 EIF2AK2P19525 551 aaKnown RBP4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 C5AR1P21730 350 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 CNTFP26441 200 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 DNM2P50570 870 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 CACNB3P54284 484 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 ADKP55263 362 aaKnown RBP4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 KIF23Q02241 960 aaPredicted RBP4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 TAF5Q15542 800 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 CCNG2Q16589 344 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 UAP1L1Q3KQV9 507 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 ANKRD39Q53RE8 183 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 EFHC2Q5JST6 749 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 SLC35F1Q5T1Q4 408 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 DENND5AQ6IQ26 1287 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 LIAT1Q6ZQX7 453 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 MAP4K3Q8IVH8 894 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 HSCBQ8IWL3 235 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 SYTL1Q8IYJ3 562 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 C7orf61Q8IZ16 206 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 KIAA0319LQ8IZA0 1049 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 KRT78Q8N1N4 520 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 MEIOBQ8N635 442 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 NKAIN3Q8N8D7 197 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 LSMEM1Q8N8F7 131 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 ZNF527Q8NB42 609 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 SLC30A5Q8TAD4 765 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 CDHR1Q96JP9 859 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 TSPAN18Q96SJ8 248 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 GAS2L1Q99501 681 aaPredicted RBP4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 SLC30A3Q99726 388 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 WNT10AQ9GZT5 417 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 NKX2-4Q9H2Z4 354 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 TRIT1Q9H3H1 467 aaKnown RBP4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 BRD9Q9H8M2 597 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 ATP6V0A4Q9HBG4 840 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 PICK1Q9NRD5 415 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 CCM2LQ9NUG4 571 aaPredicted RBP4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 IRAK4Q9NWZ3 460 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 DNAJC28Q9NX36 388 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 NKIRAS2Q9NYR9 191 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 TJP2Q9UDY2 1190 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 CGGBP1Q9UFW8 167 aaPredicted RBP4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 ACAD8Q9UKU7 415 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 PPP1R9AQ9ULJ8 1098 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 CORO2BQ9UQ03 480 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 SNX13Q9Y5W8 968 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 ARVCFO00192 962 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 ADAMTS3O15072 1205 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 EFSO43281 561 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 B3GALT2O43825 422 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 VAMP4O75379 141 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 KRT37O76014 449 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 ECEL1O95672 775 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 F11P03951 625 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 POLBP06746 335 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 ZBTB48P10074 688 aaPredicted RBP4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 ATP1A3P13637 1013 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 RPS6KB1P23443 525 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 ROR1Q01973 937 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 TBC1D8BQ0IIM8 1120 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 PDE3AQ14432 1141 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 STARD3Q14849 445 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 PLCB4Q15147 1175 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 POU4F3Q15319 338 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 CNN3Q15417 329 aaKnown RBP4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 NOL9Q5SY16 702 aaKnown RBP4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 C6orf118Q5T5N4 469 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 MFSD4BQ5TF39 518 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 SWSAP1Q6NVH7 229 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 CASC1Q6TDU7 716 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 USP45Q70EL2 814 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 COLGALT2Q8IYK4 626 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 NDUFAF2Q8N183 169 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 ESX1Q8N693 406 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 EFHBQ8N7U6 833 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 PPM1NQ8N819 430 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 C2orf69Q8N8R5 385 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 KCT2Q8NC54 265 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 PCDH19Q8TAB3 1148 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 RNF217Q8TC41 542 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 LRTOMTQ8WZ04 291 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 C1orf159Q96HA4 380 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 ZNF496Q96IT1 587 aaPredicted RBP4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 RSRC1Q96IZ7 334 aaKnown RBP4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 ZMAT2Q96NC0 199 aaKnown RBP4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 SLC2A13Q96QE2 648 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 MYCBPQ99417 103 aaPredicted RBP4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 CORO1BQ9BR76 489 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 SDF4Q9BRK5 362 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 CHCHD6Q9BRQ6 235 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 PHF20Q9BVI0 1012 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 ADAM19Q9H013 955 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 MS4A5Q9H3V2 200 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 GP6Q9HCN6 339 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 CD248Q9HCU0 757 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 DMRT3Q9NQL9 472 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 GGA3Q9NZ52 723 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms