RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 SMIM10L2AP0DMW4 78 aa18.23■□□□□ 0.51
HDAC6-236ENST00000498808 SMIM10L2BP0DMW5 78 aa18.23■□□□□ 0.51
HDAC6-236ENST00000498808 MX1P20591 662 aa18.23■□□□□ 0.51
HDAC6-236ENST00000498808 BMPR1AP36894 532 aa18.23■□□□□ 0.51
HDAC6-236ENST00000498808 SP2Q02086 613 aa18.23■□□□□ 0.51
HDAC6-236ENST00000498808 TCF15Q12870 199 aa18.23■□□□□ 0.51
HDAC6-236ENST00000498808 IL17RAQ96F46 866 aa18.23■□□□□ 0.51
HDAC6-236ENST00000498808 PDCD2LQ9BRP1 358 aa18.23■□□□□ 0.51
HDAC6-236ENST00000498808 ZKSCAN3Q9BRR0 538 aa18.23■□□□□ 0.51
HDAC6-236ENST00000498808 C11orf84Q9BUA3 381 aaPredicted RBP18.23■□□□□ 0.51
HDAC6-236ENST00000498808 RNPEPQ9H4A4 650 aa18.23■□□□□ 0.51
HDAC6-236ENST00000498808 HELLSQ9NRZ9 838 aa18.23■□□□□ 0.51
HDAC6-236ENST00000498808 MRPL11Q9Y3B7 192 aaKnown RBP18.23■□□□□ 0.51
HDAC6-236ENST00000498808 SALL3Q9BXA9 1300 aa18.23■□□□□ 0.51
HDAC6-236ENST00000498808 KMT2EQ8IZD2 1858 aa18.22■□□□□ 0.51
HDAC6-236ENST00000498808 A0A0D9SFI3 127 aa18.22■□□□□ 0.51
HDAC6-236ENST00000498808 TMEM221A6NGB7 291 aa18.22■□□□□ 0.51
HDAC6-236ENST00000498808 M0R296 226 aa18.22■□□□□ 0.51
HDAC6-236ENST00000498808 CAND2O75155 1236 aa18.22■□□□□ 0.51
HDAC6-236ENST00000498808 CFBP00751 764 aa18.22■□□□□ 0.51
HDAC6-236ENST00000498808 HSPD1P10809 573 aaKnown RBP18.22■□□□□ 0.51
HDAC6-236ENST00000498808 MYCLP12524 364 aaPredicted RBP18.22■□□□□ 0.51
HDAC6-236ENST00000498808 UBA1P22314 1058 aaKnown RBP18.22■□□□□ 0.51
HDAC6-236ENST00000498808 TRIM67Q6ZTA4 783 aa18.22■□□□□ 0.51
HDAC6-236ENST00000498808 FAM227BQ96M60 508 aa18.22■□□□□ 0.51
HDAC6-236ENST00000498808 RC3H2Q9HBD1 1191 aaKnown RBP18.22■□□□□ 0.51
HDAC6-236ENST00000498808 CD207Q9UJ71 328 aa18.22■□□□□ 0.51
HDAC6-236ENST00000498808 NEDD4P46934 1319 aa18.22■□□□□ 0.51
HDAC6-236ENST00000498808 CACNA1HO95180 2353 aa18.22■□□□□ 0.51
HDAC6-236ENST00000498808 H3BRB1 525 aa18.21■□□□□ 0.51
HDAC6-236ENST00000498808 CSPG5O95196 566 aa18.21■□□□□ 0.51
HDAC6-236ENST00000498808 HSD17B4P51659 736 aa18.21■□□□□ 0.51
HDAC6-236ENST00000498808 GHRHRQ02643 423 aa18.21■□□□□ 0.51
HDAC6-236ENST00000498808 MFSD6Q6ZSS7 791 aa18.21■□□□□ 0.51
HDAC6-236ENST00000498808 ZNF589Q86UQ0 364 aaPredicted RBP18.21■□□□□ 0.51
HDAC6-236ENST00000498808 DGKHQ86XP1 1220 aa18.21■□□□□ 0.51
HDAC6-236ENST00000498808 PNMA1Q8ND90 353 aa18.21■□□□□ 0.51
HDAC6-236ENST00000498808 IL31RAQ8NI17 732 aa18.21■□□□□ 0.51
HDAC6-236ENST00000498808 APBB2Q92870 758 aa18.21■□□□□ 0.51
HDAC6-236ENST00000498808 GPKOWQ92917 476 aaPredicted RBP eCLIP18.21■□□□□ 0.51
HDAC6-236ENST00000498808 PBXIP1Q96AQ6 731 aa18.21■□□□□ 0.51
HDAC6-236ENST00000498808 IGFLR1Q9H665 355 aa18.21■□□□□ 0.51
HDAC6-236ENST00000498808 TUT1Q9H6E5 874 aaKnown RBP18.21■□□□□ 0.51
HDAC6-236ENST00000498808 JMJD4Q9H9V9 463 aa18.21■□□□□ 0.51
HDAC6-236ENST00000498808 ALG13Q9NP73 1137 aaKnown RBP18.21■□□□□ 0.51
HDAC6-236ENST00000498808 RCAN3Q9UKA8 241 aa18.21■□□□□ 0.51
HDAC6-236ENST00000498808 ADGRA3Q8IWK6 1321 aa18.21■□□□□ 0.51
HDAC6-236ENST00000498808 LGALS2P05162 132 aa18.2■□□□□ 0.5
HDAC6-236ENST00000498808 PCP11498 1178 aaKnown RBP18.2■□□□□ 0.5
HDAC6-236ENST00000498808 ADAM15Q13444 863 aa18.2■□□□□ 0.5
HDAC6-236ENST00000498808 CAMK1Q14012 370 aa18.2■□□□□ 0.5
HDAC6-236ENST00000498808 KCNV1Q6PIU1 500 aa18.2■□□□□ 0.5
HDAC6-236ENST00000498808 CLP1Q92989 425 aaKnown RBP18.2■□□□□ 0.5
HDAC6-236ENST00000498808 ZFP91Q96JP5 570 aaPredicted RBP18.2■□□□□ 0.5
HDAC6-236ENST00000498808 MSLNLQ96KJ4 702 aa18.2■□□□□ 0.5
HDAC6-236ENST00000498808 BCAS3Q9H6U6 928 aa18.2■□□□□ 0.5
HDAC6-236ENST00000498808 RWDD3Q9Y3V2 267 aa18.2■□□□□ 0.5
HDAC6-236ENST00000498808 EYA4O95677 639 aa18.19■□□□□ 0.5
HDAC6-236ENST00000498808 MMP1P03956 469 aa18.19■□□□□ 0.5
HDAC6-236ENST00000498808 PGM5Q15124 567 aa18.19■□□□□ 0.5
HDAC6-236ENST00000498808 MCMDC2Q4G0Z9 681 aa18.19■□□□□ 0.5
HDAC6-236ENST00000498808 ASPRV1Q53RT3 343 aa18.19■□□□□ 0.5
HDAC6-236ENST00000498808 FAM26DQ5JW98 314 aa18.19■□□□□ 0.5
HDAC6-236ENST00000498808 STOX1Q6ZVD7 989 aa18.19■□□□□ 0.5
HDAC6-236ENST00000498808 VSIG10LQ86VR7 867 aa18.19■□□□□ 0.5
HDAC6-236ENST00000498808 EVI5LQ96CN4 794 aa18.19■□□□□ 0.5
HDAC6-236ENST00000498808 CFAP54Q96N23 3096 aa18.19■□□□□ 0.5
HDAC6-236ENST00000498808 PRRX2Q99811 253 aa18.19■□□□□ 0.5
HDAC6-236ENST00000498808 VAT1LQ9HCJ6 419 aa18.19■□□□□ 0.5
HDAC6-236ENST00000498808 SETD4Q9NVD3 440 aa18.19■□□□□ 0.5
HDAC6-236ENST00000498808 CCDC171Q6TFL3 1326 aa18.19■□□□□ 0.5
HDAC6-236ENST00000498808 DHX16O60231 1041 aaKnown RBP18.18■□□□□ 0.5
HDAC6-236ENST00000498808 TGFB3P10600 412 aa18.18■□□□□ 0.5
HDAC6-236ENST00000498808 ZXDAP98168 799 aa18.18■□□□□ 0.5
HDAC6-236ENST00000498808 SUGP1Q8IWZ8 645 aaKnown RBP18.18■□□□□ 0.5
HDAC6-236ENST00000498808 ESR2Q92731 530 aa18.18■□□□□ 0.5
HDAC6-236ENST00000498808 MLXIPQ9HAP2 919 aa18.18■□□□□ 0.5
HDAC6-236ENST00000498808 FAM86C1Q9NVL1 165 aa18.18■□□□□ 0.5
HDAC6-236ENST00000498808 TTC3P53804 2025 aa18.17■□□□□ 0.5
HDAC6-236ENST00000498808 LOC730098B7Z3J9 87 aa18.17■□□□□ 0.5
HDAC6-236ENST00000498808 PPP1R11O60927 126 aaPredicted RBP18.17■□□□□ 0.5
HDAC6-236ENST00000498808 HOXA13P31271 388 aaPredicted RBP18.17■□□□□ 0.5
HDAC6-236ENST00000498808 NDUFV1P49821 464 aa18.17■□□□□ 0.5
HDAC6-236ENST00000498808 ADAM17P78536 824 aa18.17■□□□□ 0.5
HDAC6-236ENST00000498808 PKN1Q16512 942 aa18.17■□□□□ 0.5
HDAC6-236ENST00000498808 FBXL6Q8N531 539 aa18.17■□□□□ 0.5
HDAC6-236ENST00000498808 ZNF689Q96CS4 500 aaPredicted RBP18.17■□□□□ 0.5
HDAC6-236ENST00000498808 RNF41Q9H4P4 317 aaPredicted RBP18.17■□□□□ 0.5
HDAC6-236ENST00000498808 KAT14Q9H8E8 782 aa18.17■□□□□ 0.5
HDAC6-236ENST00000498808 CLEC1BQ9P126 229 aa18.17■□□□□ 0.5
HDAC6-236ENST00000498808 SUPT16HQ9Y5B9 1047 aaKnown RBP18.17■□□□□ 0.5
HDAC6-236ENST00000498808 KIAA1671Q9BY89 1806 aa18.16■□□□□ 0.5
HDAC6-236ENST00000498808 DOCK5Q9H7D0 1870 aa18.16■□□□□ 0.5
HDAC6-236ENST00000498808 GFRA3O60609 400 aa18.16■□□□□ 0.5
HDAC6-236ENST00000498808 CHRNA1P02708 482 aa18.16■□□□□ 0.5
HDAC6-236ENST00000498808 GHRP10912 638 aa18.16■□□□□ 0.5
HDAC6-236ENST00000498808 DNAJB1P25685 340 aa18.16■□□□□ 0.5
HDAC6-236ENST00000498808 NMIQ13287 307 aaPredicted RBP18.16■□□□□ 0.5
HDAC6-236ENST00000498808 CBX2Q14781 532 aaPredicted RBP18.16■□□□□ 0.5
HDAC6-236ENST00000498808 ADGRD2Q7Z7M1 963 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms