RNA–Protein interactions for RNA: ENST00000496152.1

NDUFAF3-206, Transcript of NADH:ubiquinone oxidoreductase complex assembly factor 3, humanhuman

TSL 2

Gene NDUFAF3, Length 826 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3-206ENST00000496152 TBX10O75333 385 aa13.95□□□□□ -0.18
NDUFAF3-206ENST00000496152 EIF3JO75822 258 aaKnown RBP13.95□□□□□ -0.18
NDUFAF3-206ENST00000496152 FGRP09769 529 aa13.95□□□□□ -0.18
NDUFAF3-206ENST00000496152 LINC00271P0C7V0 271 aa13.95□□□□□ -0.18
NDUFAF3-206ENST00000496152 ZNF286BP0CG31 522 aa13.95□□□□□ -0.18
NDUFAF3-206ENST00000496152 AVPR2P30518 371 aa13.95□□□□□ -0.18
NDUFAF3-206ENST00000496152 CTNNB1P35222 781 aa13.95□□□□□ -0.18
NDUFAF3-206ENST00000496152 GTF2F1P35269 517 aaKnown RBP eCLIP13.95□□□□□ -0.18
NDUFAF3-206ENST00000496152 NMIQ13287 307 aaPredicted RBP13.95□□□□□ -0.18
NDUFAF3-206ENST00000496152 CBX2Q14781 532 aaPredicted RBP13.95□□□□□ -0.18
NDUFAF3-206ENST00000496152 DHX37Q8IY37 1157 aaKnown RBP13.95□□□□□ -0.18
NDUFAF3-206ENST00000496152 ATOH1Q92858 354 aaPredicted RBP13.95□□□□□ -0.18
NDUFAF3-206ENST00000496152 MSLNLQ96KJ4 702 aa13.95□□□□□ -0.18
NDUFAF3-206ENST00000496152 C11orf84Q9BUA3 381 aaPredicted RBP13.95□□□□□ -0.18
NDUFAF3-206ENST00000496152 IFIH1Q9BYX4 1025 aaKnown RBP13.95□□□□□ -0.18
NDUFAF3-206ENST00000496152 OSBPL7Q9BZF2 842 aa13.95□□□□□ -0.18
NDUFAF3-206ENST00000496152 ANAPC4Q9UJX5 808 aa13.95□□□□□ -0.18
NDUFAF3-206ENST00000496152 HIP1O00291 1037 aa13.94□□□□□ -0.18
NDUFAF3-206ENST00000496152 LINC01565O15544 149 aa13.94□□□□□ -0.18
NDUFAF3-206ENST00000496152 PDHBP11177 359 aa13.94□□□□□ -0.18
NDUFAF3-206ENST00000496152 CHMLP26374 656 aa13.94□□□□□ -0.18
NDUFAF3-206ENST00000496152 ZNF543Q08ER8 600 aa13.94□□□□□ -0.18
NDUFAF3-206ENST00000496152 MCMDC2Q4G0Z9 681 aa13.94□□□□□ -0.18
NDUFAF3-206ENST00000496152 RMDN3Q96TC7 470 aa13.94□□□□□ -0.18
NDUFAF3-206ENST00000496152 TCP11L1Q9NUJ3 509 aa13.94□□□□□ -0.18
NDUFAF3-206ENST00000496152 RWDD3Q9Y3V2 267 aa13.94□□□□□ -0.18
NDUFAF3-206ENST00000496152 GTF3C3Q9Y5Q9 886 aa13.94□□□□□ -0.18
NDUFAF3-206ENST00000496152 LCTP09848 1927 aa13.94□□□□□ -0.18
NDUFAF3-206ENST00000496152 MYH4Q9Y623 1939 aa13.94□□□□□ -0.18
NDUFAF3-206ENST00000496152 TRIP12Q14669 1992 aaPredicted RBP13.93□□□□□ -0.18
NDUFAF3-206ENST00000496152 SIP14410 1827 aa13.93□□□□□ -0.18
NDUFAF3-206ENST00000496152 PROB1E7EW31 1015 aa13.93□□□□□ -0.18
NDUFAF3-206ENST00000496152 CAND2O75155 1236 aa13.93□□□□□ -0.18
NDUFAF3-206ENST00000496152 VCPP55072 806 aaKnown RBP13.93□□□□□ -0.18
NDUFAF3-206ENST00000496152 SIGLEC14Q08ET2 396 aa13.93□□□□□ -0.18
NDUFAF3-206ENST00000496152 USH1GQ495M9 461 aa13.93□□□□□ -0.18
NDUFAF3-206ENST00000496152 ZNF589Q86UQ0 364 aaPredicted RBP13.93□□□□□ -0.18
NDUFAF3-206ENST00000496152 APBB2Q92870 758 aa13.93□□□□□ -0.18
NDUFAF3-206ENST00000496152 CLP1Q92989 425 aaKnown RBP13.93□□□□□ -0.18
NDUFAF3-206ENST00000496152 ATP6V0A1Q93050 837 aa13.93□□□□□ -0.18
NDUFAF3-206ENST00000496152 ASIC4Q96FT7 647 aa13.93□□□□□ -0.18
NDUFAF3-206ENST00000496152 IL25Q9H293 177 aa13.93□□□□□ -0.18
NDUFAF3-206ENST00000496152 COL20A1Q9P218 1284 aa13.93□□□□□ -0.18
NDUFAF3-206ENST00000496152 MRVI1Q9Y6F6 885 aa13.93□□□□□ -0.18
NDUFAF3-206ENST00000496152 MYO7AQ13402 2215 aa13.92□□□□□ -0.18
NDUFAF3-206ENST00000496152 SPTBN4Q9H254 2564 aa13.92□□□□□ -0.18
NDUFAF3-206ENST00000496152 C5orf42Q9H799 3197 aa13.92□□□□□ -0.18
NDUFAF3-206ENST00000496152 C17orf102A2RUQ5 167 aa13.92□□□□□ -0.18
NDUFAF3-206ENST00000496152 NR3C2P08235 984 aa13.92□□□□□ -0.18
NDUFAF3-206ENST00000496152 SNHG28P0DPA3 235 aa13.92□□□□□ -0.18
NDUFAF3-206ENST00000496152 HOXC8P31273 242 aa13.92□□□□□ -0.18
NDUFAF3-206ENST00000496152 NUBP1P53384 320 aa13.92□□□□□ -0.18
NDUFAF3-206ENST00000496152 CAMK1Q14012 370 aa13.92□□□□□ -0.18
NDUFAF3-206ENST00000496152 MYSM1Q5VVJ2 828 aa13.92□□□□□ -0.18
NDUFAF3-206ENST00000496152 CWC27Q6UX04 472 aaKnown RBP13.92□□□□□ -0.18
NDUFAF3-206ENST00000496152 C16orf70Q9BSU1 422 aa13.92□□□□□ -0.18
NDUFAF3-206ENST00000496152 DIAPH3Q9NSV4 1193 aa13.92□□□□□ -0.18
NDUFAF3-206ENST00000496152 CLEC1BQ9P126 229 aa13.92□□□□□ -0.18
NDUFAF3-206ENST00000496152 H0Y858 1186 aa13.91□□□□□ -0.18
NDUFAF3-206ENST00000496152 TREHO43280 583 aa13.91□□□□□ -0.18
NDUFAF3-206ENST00000496152 MMP1P03956 469 aa13.91□□□□□ -0.18
NDUFAF3-206ENST00000496152 NDUFV1P49821 464 aa13.91□□□□□ -0.18
NDUFAF3-206ENST00000496152 COASYQ13057 564 aa13.91□□□□□ -0.18
NDUFAF3-206ENST00000496152 HSDL1Q3SXM5 330 aa13.91□□□□□ -0.18
NDUFAF3-206ENST00000496152 CELF3Q5SZQ8 465 aaKnown RBP13.91□□□□□ -0.18
NDUFAF3-206ENST00000496152 VPS53Q5VIR6 699 aa13.91□□□□□ -0.18
NDUFAF3-206ENST00000496152 ARHGEF16Q5VV41 709 aa13.91□□□□□ -0.18
NDUFAF3-206ENST00000496152 ERMP1Q7Z2K6 904 aa13.91□□□□□ -0.18
NDUFAF3-206ENST00000496152 MCF2L2Q86YR7 1114 aa13.91□□□□□ -0.18
NDUFAF3-206ENST00000496152 EFHBQ8N7U6 833 aa13.91□□□□□ -0.18
NDUFAF3-206ENST00000496152 SMRP1Q8NCR6 262 aa13.91□□□□□ -0.18
NDUFAF3-206ENST00000496152 SPATA33Q96N06 139 aa13.91□□□□□ -0.18
NDUFAF3-206ENST00000496152 TTC14Q96N46 770 aa13.91□□□□□ -0.18
NDUFAF3-206ENST00000496152 PLVAPQ9BX97 442 aa13.91□□□□□ -0.18
NDUFAF3-206ENST00000496152 TLR9Q9NR96 1032 aa13.91□□□□□ -0.18
NDUFAF3-206ENST00000496152 PLAGL2Q9UPG8 496 aa13.91□□□□□ -0.18
NDUFAF3-206ENST00000496152 COL4A6Q14031 1691 aa13.91□□□□□ -0.18
NDUFAF3-206ENST00000496152 CCDC171Q6TFL3 1326 aa13.9□□□□□ -0.18
NDUFAF3-206ENST00000496152 EIF2AK2P19525 551 aaKnown RBP13.9□□□□□ -0.18
NDUFAF3-206ENST00000496152 ALX1Q15699 326 aa13.9□□□□□ -0.18
NDUFAF3-206ENST00000496152 FAM26DQ5JW98 314 aa13.9□□□□□ -0.18
NDUFAF3-206ENST00000496152 KCNV1Q6PIU1 500 aa13.9□□□□□ -0.18
NDUFAF3-206ENST00000496152 ASCL5Q7RTU5 278 aa13.9□□□□□ -0.18
NDUFAF3-206ENST00000496152 PPP2R3CQ969Q6 453 aa13.9□□□□□ -0.18
NDUFAF3-206ENST00000496152 PHF7Q9BWX1 381 aaPredicted RBP13.9□□□□□ -0.18
NDUFAF3-206ENST00000496152 UBA5Q9GZZ9 404 aa13.9□□□□□ -0.18
NDUFAF3-206ENST00000496152 RNPEPQ9H4A4 650 aa13.9□□□□□ -0.18
NDUFAF3-206ENST00000496152 RC3H2Q9HBD1 1191 aaKnown RBP13.9□□□□□ -0.18
NDUFAF3-206ENST00000496152 ABCB11O95342 1321 aa13.9□□□□□ -0.19
NDUFAF3-206ENST00000496152 H3BRB1 525 aa13.89□□□□□ -0.19
NDUFAF3-206ENST00000496152 ENPP3O14638 875 aa13.89□□□□□ -0.19
NDUFAF3-206ENST00000496152 SGSM2O43147 1006 aa13.89□□□□□ -0.19
NDUFAF3-206ENST00000496152 RGS20O76081 388 aa13.89□□□□□ -0.19
NDUFAF3-206ENST00000496152 CTSHP09668 335 aa13.89□□□□□ -0.19
NDUFAF3-206ENST00000496152 SMIM10L2AP0DMW4 78 aa13.89□□□□□ -0.19
NDUFAF3-206ENST00000496152 SMIM10L2BP0DMW5 78 aa13.89□□□□□ -0.19
NDUFAF3-206ENST00000496152 HSPD1P10809 573 aaKnown RBP13.89□□□□□ -0.19
NDUFAF3-206ENST00000496152 ICAM3P32942 547 aa13.89□□□□□ -0.19
NDUFAF3-206ENST00000496152 GPATCH4Q5T3I0 446 aaKnown RBP13.89□□□□□ -0.19
NDUFAF3-206ENST00000496152 ZNF689Q96CS4 500 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms