RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 LTFP02788 710 aa6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 APPP05067 770 aa6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 ZBTB48P10074 688 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 KRT15P19012 456 aa6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 POU3F3P20264 500 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 FBLN1P23142 703 aa6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 FLT3P36888 993 aa6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 SRSF3P84103 164 aaKnown RBP6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 SLC9A5Q14940 896 aa6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 CHRNA2Q15822 529 aa6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 FSTL4Q6MZW2 842 aa6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 OGFOD2Q6N063 350 aa6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 PKN3Q6P5Z2 889 aa6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 OTOP1Q7RTM1 612 aa6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 PTRH1Q86Y79 214 aaKnown RBP6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 PPM1KQ8N3J5 372 aa6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 UBR7Q8N806 425 aa6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 ARRDC4Q8NCT1 418 aa6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 FAM126AQ9BYI3 521 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 CD244Q9BZW8 370 aa6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 PDGFDQ9GZP0 370 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 SPC25Q9HBM1 224 aa6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 MYOTQ9UBF9 498 aa6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 ANKRD62A6NC57 917 aa6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 KCNK3O14649 394 aa6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 PEX10O60683 326 aa6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 DNAJC6O75061 913 aa6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 YBX3P16989 372 aaKnown RBP eCLIP6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 EPHA5P54756 1037 aa6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 TMEM62Q0P6H9 643 aa6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 SKOR2Q2VWA4 1001 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 HHIPL2Q6UWX4 724 aa6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 TMC6Q7Z403 805 aa6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 STRA8Q7Z7C7 330 aa6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 ANKLE2Q86XL3 938 aa6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 AHI1Q8N157 1196 aa6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 NXPE1Q8N323 547 aa6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 PHOSPHO1Q8TCT1 267 aa6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 CAAP1Q9H8G2 361 aa6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 CNTD2Q9H8S5 307 aa6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 B4GALT6Q9UBX8 382 aa6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 MBD1Q9UIS9 605 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 SRPK3Q9UPE1 567 aa6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 PCDHB4Q9Y5E5 795 aa6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 IRS2Q9Y4H2 1338 aa6.47□□□□□ -1.37
HMGB3P6-201ENST00000444896 ZNF200P98182 395 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P6-201ENST00000444896 TUSC3Q13454 348 aa6.46□□□□□ -1.38
HMGB3P6-201ENST00000444896 ZNF648Q5T619 568 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P6-201ENST00000444896 RNF187Q5TA31 235 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P6-201ENST00000444896 KCTD1Q719H9 257 aa6.46□□□□□ -1.38
HMGB3P6-201ENST00000444896 KIF18BQ86Y91 864 aa6.46□□□□□ -1.38
HMGB3P6-201ENST00000444896 MIB1Q86YT6 1006 aa6.46□□□□□ -1.38
HMGB3P6-201ENST00000444896 NOSTRINQ8IVI9 506 aa6.46□□□□□ -1.38
HMGB3P6-201ENST00000444896 C2orf69Q8N8R5 385 aa6.46□□□□□ -1.38
HMGB3P6-201ENST00000444896 CHST14Q8NCH0 376 aa6.46□□□□□ -1.38
HMGB3P6-201ENST00000444896 FBXO15Q8NCQ5 510 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P6-201ENST00000444896 LEO1Q8WVC0 666 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P6-201ENST00000444896 FAM84AQ96KN4 292 aa6.46□□□□□ -1.38
HMGB3P6-201ENST00000444896 FMNL2Q96PY5 1086 aa6.46□□□□□ -1.38
HMGB3P6-201ENST00000444896 PPP1R16BQ96T49 567 aa6.46□□□□□ -1.38
HMGB3P6-201ENST00000444896 TMX1Q9H3N1 280 aa6.46□□□□□ -1.38
HMGB3P6-201ENST00000444896 FAM90A27PA6NNH2 459 aa6.45□□□□□ -1.38
HMGB3P6-201ENST00000444896 ZNF891A8MT65 544 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P6-201ENST00000444896 MAFKO60675 156 aa6.45□□□□□ -1.38
HMGB3P6-201ENST00000444896 F2P00734 622 aa6.45□□□□□ -1.38
HMGB3P6-201ENST00000444896 ASGR2P07307 311 aa6.45□□□□□ -1.38
HMGB3P6-201ENST00000444896 PMLP29590 882 aa6.45□□□□□ -1.38
HMGB3P6-201ENST00000444896 DSG1Q02413 1049 aa6.45□□□□□ -1.38
HMGB3P6-201ENST00000444896 MESP2Q0VG99 397 aa6.45□□□□□ -1.38
HMGB3P6-201ENST00000444896 SEC23AQ15436 765 aa6.45□□□□□ -1.38
HMGB3P6-201ENST00000444896 OLFML2BQ68BL8 750 aa6.45□□□□□ -1.38
HMGB3P6-201ENST00000444896 CREB3L3Q68CJ9 461 aa6.45□□□□□ -1.38
HMGB3P6-201ENST00000444896 LDHDQ86WU2 507 aa6.45□□□□□ -1.38
HMGB3P6-201ENST00000444896 PANK1Q8TE04 598 aa6.45□□□□□ -1.38
HMGB3P6-201ENST00000444896 CHAC2Q8WUX2 184 aa6.45□□□□□ -1.38
HMGB3P6-201ENST00000444896 ALG3Q92685 438 aa6.45□□□□□ -1.38
HMGB3P6-201ENST00000444896 GPATCH3Q96I76 525 aa6.45□□□□□ -1.38
HMGB3P6-201ENST00000444896 SGPP1Q9BX95 441 aa6.45□□□□□ -1.38
HMGB3P6-201ENST00000444896 GCM1Q9NP62 436 aa6.45□□□□□ -1.38
HMGB3P6-201ENST00000444896 PCDHA5Q9Y5H7 936 aa6.45□□□□□ -1.38
HMGB3P6-201ENST00000444896 TEX51A0A1B0GUA7 166 aa6.44□□□□□ -1.38
HMGB3P6-201ENST00000444896 SLC12A8A0AV02 714 aa6.44□□□□□ -1.38
HMGB3P6-201ENST00000444896 PTPDC1A2A3K4 754 aa6.44□□□□□ -1.38
HMGB3P6-201ENST00000444896 ACOT7O00154 380 aa6.44□□□□□ -1.38
HMGB3P6-201ENST00000444896 NFIBO00712 420 aa6.44□□□□□ -1.38
HMGB3P6-201ENST00000444896 DVL2O14641 736 aa6.44□□□□□ -1.38
HMGB3P6-201ENST00000444896 CLASP2O75122 1294 aaKnown RBP6.44□□□□□ -1.38
HMGB3P6-201ENST00000444896 TMEM253P0C7T8 217 aa6.44□□□□□ -1.38
HMGB3P6-201ENST00000444896 ATF2P15336 505 aa6.44□□□□□ -1.38
HMGB3P6-201ENST00000444896 CDR1P51861 262 aa6.44□□□□□ -1.38
HMGB3P6-201ENST00000444896 AMPD3Q01432 767 aa6.44□□□□□ -1.38
HMGB3P6-201ENST00000444896 GRIN1Q05586 938 aa6.44□□□□□ -1.38
HMGB3P6-201ENST00000444896 SYDE1Q6ZW31 735 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P6-201ENST00000444896 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P6-201ENST00000444896 NLGN4XQ8N0W4 816 aa6.44□□□□□ -1.38
HMGB3P6-201ENST00000444896 CABP5Q9NP86 173 aa6.44□□□□□ -1.38
HMGB3P6-201ENST00000444896 SIRT5Q9NXA8 310 aa6.44□□□□□ -1.38
HMGB3P6-201ENST00000444896 LRG1P02750 347 aa6.43□□□□□ -1.38
HMGB3P6-201ENST00000444896 ATP2A2P16615 1042 aaKnown RBP6.43□□□□□ -1.38
HMGB3P6-201ENST00000444896 NCKAP1LP55160 1127 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms