RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 CCDC63Q8NA47 563 aa19.29■□□□□ 0.68
SNED1-204ENST00000401884 MAIP1Q8WWC4 291 aa19.29■□□□□ 0.68
SNED1-204ENST00000401884 LIMA1Q9UHB6 759 aaKnown RBP19.29■□□□□ 0.68
SNED1-204ENST00000401884 FAM196BA6NMK8 535 aa19.29■□□□□ 0.68
SNED1-204ENST00000401884 NTSR2O95665 410 aa19.29■□□□□ 0.68
SNED1-204ENST00000401884 STAT2P52630 851 aa19.29■□□□□ 0.68
SNED1-204ENST00000401884 TROAPQ12815 778 aa19.29■□□□□ 0.68
SNED1-204ENST00000401884 TNFAIP1Q13829 316 aa19.29■□□□□ 0.68
SNED1-204ENST00000401884 TBC1D10BQ4KMP7 808 aaPredicted RBP19.29■□□□□ 0.68
SNED1-204ENST00000401884 HDAC6Q9UBN7 1215 aa19.29■□□□□ 0.68
SNED1-204ENST00000401884 C1orf112Q9NSG2 853 aa19.29■□□□□ 0.68
SNED1-204ENST00000401884 MEGF6O75095 1541 aa19.29■□□□□ 0.68
SNED1-204ENST00000401884 SFI1A8K8P3 1242 aa19.28■□□□□ 0.68
SNED1-204ENST00000401884 USP17L10C9JJH3 530 aa19.28■□□□□ 0.68
SNED1-204ENST00000401884 LIG3P49916 1009 aa19.28■□□□□ 0.68
SNED1-204ENST00000401884 PPP4R3CPQ6ZMV5 832 aa19.28■□□□□ 0.68
SNED1-204ENST00000401884 PNMA8AQ86V59 439 aaPredicted RBP19.28■□□□□ 0.68
SNED1-204ENST00000401884 DEPTORQ8TB45 409 aa19.28■□□□□ 0.68
SNED1-204ENST00000401884 QTRT2Q9H974 415 aaKnown RBP19.28■□□□□ 0.68
SNED1-204ENST00000401884 PCDHA6Q9UN73 950 aa19.28■□□□□ 0.68
SNED1-204ENST00000401884 PCDHA8Q9Y5H6 950 aa19.28■□□□□ 0.68
SNED1-204ENST00000401884 IFNB1P01574 187 aa19.28■□□□□ 0.68
SNED1-204ENST00000401884 MXRA7P84157 204 aa19.28■□□□□ 0.68
SNED1-204ENST00000401884 SBK1Q52WX2 424 aa19.28■□□□□ 0.68
SNED1-204ENST00000401884 PROM2Q8N271 834 aa19.28■□□□□ 0.68
SNED1-204ENST00000401884 KDM6AO15550 1401 aaPredicted RBP19.28■□□□□ 0.68
SNED1-204ENST00000401884 HNRNPH2P55795 449 aaKnown RBP19.28■□□□□ 0.68
SNED1-204ENST00000401884 LIG4P49917 911 aa19.28■□□□□ 0.68
SNED1-204ENST00000401884 PDE6CP51160 858 aa19.28■□□□□ 0.68
SNED1-204ENST00000401884 GNPTABQ3T906 1256 aa19.28■□□□□ 0.68
SNED1-204ENST00000401884 ADSSL1Q8N142 457 aa19.28■□□□□ 0.68
SNED1-204ENST00000401884 POMGNT1Q8WZA1 660 aa19.28■□□□□ 0.68
SNED1-204ENST00000401884 RAD54LQ92698 747 aa19.28■□□□□ 0.68
SNED1-204ENST00000401884 PCIF1Q9H4Z3 704 aa19.28■□□□□ 0.68
SNED1-204ENST00000401884 AZI2Q9H6S1 392 aa19.28■□□□□ 0.68
SNED1-204ENST00000401884 POLD4Q9HCU8 107 aa19.28■□□□□ 0.68
SNED1-204ENST00000401884 RAD9BQ6WBX8 426 aa19.27■□□□□ 0.68
SNED1-204ENST00000401884 GINS2Q9Y248 185 aa19.27■□□□□ 0.68
SNED1-204ENST00000401884 BAZ2BQ9UIF8 2168 aaKnown RBP19.27■□□□□ 0.68
SNED1-204ENST00000401884 KRT15P19012 456 aa19.27■□□□□ 0.68
SNED1-204ENST00000401884 NFIXQ14938 502 aa19.27■□□□□ 0.68
SNED1-204ENST00000401884 ANKRD40Q6AI12 368 aa19.27■□□□□ 0.68
SNED1-204ENST00000401884 MGARPQ8TDB4 240 aa19.27■□□□□ 0.68
SNED1-204ENST00000401884 STIM2Q9P246 746 aa19.27■□□□□ 0.68
SNED1-204ENST00000401884 DAAM1Q9Y4D1 1078 aa19.27■□□□□ 0.68
SNED1-204ENST00000401884 POTEB3A0JP26 581 aa19.27■□□□□ 0.67
SNED1-204ENST00000401884 POTECB2RU33 542 aa19.27■□□□□ 0.67
SNED1-204ENST00000401884 GH2P01242 217 aa19.27■□□□□ 0.67
SNED1-204ENST00000401884 SEMA3FQ13275 785 aa19.27■□□□□ 0.67
SNED1-204ENST00000401884 LLGL1Q15334 1064 aa19.27■□□□□ 0.67
SNED1-204ENST00000401884 FAM83BQ5T0W9 1011 aa19.27■□□□□ 0.67
SNED1-204ENST00000401884 POTEBQ6S5H4 581 aa19.27■□□□□ 0.67
SNED1-204ENST00000401884 CACNA2D3Q8IZS8 1091 aa19.27■□□□□ 0.67
SNED1-204ENST00000401884 HPS3Q969F9 1004 aa19.27■□□□□ 0.67
SNED1-204ENST00000401884 MLXIPQ9HAP2 919 aa19.27■□□□□ 0.67
SNED1-204ENST00000401884 HPSEQ9Y251 543 aa19.27■□□□□ 0.67
SNED1-204ENST00000401884 DMP1Q13316 513 aaPredicted RBP19.26■□□□□ 0.67
SNED1-204ENST00000401884 CTTNQ14247 550 aaKnown RBP19.26■□□□□ 0.67
SNED1-204ENST00000401884 TMEM179Q6ZVK1 233 aa19.26■□□□□ 0.67
SNED1-204ENST00000401884 HOMER3Q9NSC5 361 aa19.26■□□□□ 0.67
SNED1-204ENST00000401884 CAPN11Q9UMQ6 739 aa19.26■□□□□ 0.67
SNED1-204ENST00000401884 ANKRD42Q8N9B4 389 aa19.26■□□□□ 0.67
SNED1-204ENST00000401884 PIGOQ8TEQ8 1089 aa19.26■□□□□ 0.67
SNED1-204ENST00000401884 SPZ1Q9BXG8 430 aa19.26■□□□□ 0.67
SNED1-204ENST00000401884 CAPN7Q9Y6W3 813 aa19.26■□□□□ 0.67
SNED1-204ENST00000401884 HNRNPDLO14979 420 aaKnown RBP19.26■□□□□ 0.67
SNED1-204ENST00000401884 COASYQ13057 564 aa19.26■□□□□ 0.67
SNED1-204ENST00000401884 ORC2Q13416 577 aaPredicted RBP19.26■□□□□ 0.67
SNED1-204ENST00000401884 ITPK1Q13572 414 aa19.26■□□□□ 0.67
SNED1-204ENST00000401884 EMBQ6PCB8 327 aa19.26■□□□□ 0.67
SNED1-204ENST00000401884 EIF3CLB5ME19 914 aaKnown RBP19.26■□□□□ 0.67
SNED1-204ENST00000401884 AP3B2Q13367 1082 aa19.26■□□□□ 0.67
SNED1-204ENST00000401884 AOC3Q16853 763 aa19.26■□□□□ 0.67
SNED1-204ENST00000401884 C10orf76Q5T2E6 689 aa19.26■□□□□ 0.67
SNED1-204ENST00000401884 MARCH10Q8NA82 808 aaPredicted RBP19.26■□□□□ 0.67
SNED1-204ENST00000401884 EIF3CQ99613 913 aaKnown RBP19.26■□□□□ 0.67
SNED1-204ENST00000401884 TXNDC16Q9P2K2 825 aa19.26■□□□□ 0.67
SNED1-204ENST00000401884 KRT19P08727 400 aa19.25■□□□□ 0.67
SNED1-204ENST00000401884 LACTBP83111 547 aaPredicted RBP19.25■□□□□ 0.67
SNED1-204ENST00000401884 ARHGAP4P98171 946 aa19.25■□□□□ 0.67
SNED1-204ENST00000401884 GLG1Q92896 1179 aa19.25■□□□□ 0.67
SNED1-204ENST00000401884 PBKQ96KB5 322 aa19.25■□□□□ 0.67
SNED1-204ENST00000401884 NT5C1BQ96P26 610 aa19.25■□□□□ 0.67
SNED1-204ENST00000401884 CEP72Q9P209 647 aa19.25■□□□□ 0.67
SNED1-204ENST00000401884 RRP15Q9Y3B9 282 aaKnown RBP19.25■□□□□ 0.67
SNED1-204ENST00000401884 SLIT1O75093 1534 aa19.25■□□□□ 0.67
SNED1-204ENST00000401884 AKR1B1P15121 316 aa19.25■□□□□ 0.67
SNED1-204ENST00000401884 ADCY8P40145 1251 aa19.25■□□□□ 0.67
SNED1-204ENST00000401884 KCNH2Q12809 1159 aa19.25■□□□□ 0.67
SNED1-204ENST00000401884 GKAP1Q5VSY0 366 aaPredicted RBP19.25■□□□□ 0.67
SNED1-204ENST00000401884 FBXO33Q7Z6M2 555 aa19.25■□□□□ 0.67
SNED1-204ENST00000401884 VSIG1Q86XK7 387 aa19.25■□□□□ 0.67
SNED1-204ENST00000401884 TSNARE1Q96NA8 513 aa19.25■□□□□ 0.67
SNED1-204ENST00000401884 NFU1Q9UMS0 254 aa19.25■□□□□ 0.67
SNED1-204ENST00000401884 SORBS3O60504 671 aa19.25■□□□□ 0.67
SNED1-204ENST00000401884 NPR1P16066 1061 aa19.25■□□□□ 0.67
SNED1-204ENST00000401884 GFPT1Q06210 699 aaPredicted RBP19.25■□□□□ 0.67
SNED1-204ENST00000401884 STK4Q13043 487 aa19.25■□□□□ 0.67
SNED1-204ENST00000401884 RASGRP2Q7LDG7 609 aa19.25■□□□□ 0.67
SNED1-204ENST00000401884 SFR1Q86XK3 245 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms