RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 BAIAP2L1Q9UHR4 511 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 MYH10P35580 1976 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 KCNK3O14649 394 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 CCNE1P24864 410 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 LONP1P36776 959 aaKnown RBP10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 SKOR1P84550 965 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 NEDD9Q14511 834 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 NAA25Q14CX7 972 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 TXNRD1Q16881 649 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 KLHDC7AQ5VTJ3 777 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 CPLX4Q7Z7G2 160 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 CABP7Q86V35 215 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 IQCKQ8N0W5 287 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 CYFIP2Q96F07 1278 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 ATP6V1G3Q96LB4 118 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 PRDM9Q9NQV7 894 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 C4AP0C0L4 1744 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 C4BP0C0L5 1744 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 EIF4E1BA6NMX2 242 aaKnown RBP10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 TMCO5BA8MYB1 307 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 RAD51CO43502 376 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 GNAT2P19087 354 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 CTNNA1P35221 906 aaKnown RBP10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 ADAT2Q7Z6V5 191 aaKnown RBP10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 GIMAP8Q8ND71 665 aaPredicted RBP10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 MDM1Q8TC05 714 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 PACSIN1Q9BY11 444 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 TCP11L1Q9NUJ3 509 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 ADAMTS1Q9UHI8 967 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 NOVA2Q9UNW9 492 aaKnown RBP10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 TLDC2A0PJX2 215 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 GCOM1H8Y6P7 765 aaPredicted RBP10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 CEP104O60308 925 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 CCNT1O60563 726 aaKnown RBP10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 MYZAPP0CAP1 466 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 ELF1P32519 619 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 CLNS1AP54105 237 aaKnown RBP10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 GLIS3Q8NEA6 775 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 UHMK1Q8TAS1 419 aaKnown RBP10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 TBC1D5Q92609 795 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 PLAGL2Q9UPG8 496 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 MARF1Q9Y4F3 1742 aaKnown RBP10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 CNTNAP5Q8WYK1 1306 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 DCDC2CA8MYV0 355 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 DNM1LO00429 736 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 PDE8AO60658 829 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 FSBPO95073 299 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 STARD3NLO95772 234 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 PAX7P23759 505 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 CDC25CP30307 473 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 TXKP42681 527 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 RAPGEF1Q13905 1077 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 KIAA0753Q2KHM9 967 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 RPAINQ86UA6 219 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 PNMA8AQ86V59 439 aaPredicted RBP10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 PURBQ96QR8 312 aaKnown RBP10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 DPH5Q9H2P9 285 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 SEMA6BQ9H3T3 888 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 ZHX3Q9H4I2 956 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 VEZTQ9HBM0 779 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 DONSONQ9NYP3 566 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 GGT7Q9UJ14 662 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 SRCAPQ6ZRS2 3230 aa10.87□□□□□ -0.67
PTCHD4-202ENST00000398738 KLRC1P26715 233 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 GBP2P32456 591 aaPredicted RBP10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 POLR2FP61218 127 aaKnown RBP10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 VWA3BQ502W6 1294 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 KDM7AQ6ZMT4 941 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 PIK3R5Q8WYR1 880 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 ZFRQ96KR1 1074 aaKnown RBP10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 RBM28Q9NW13 759 aaKnown RBP10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 ZBTB1Q9Y2K1 713 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 KIF1AQ12756 1690 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 BICDL2A1A5D9 508 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 RHOBTB3O94955 611 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 DIXDC1Q155Q3 683 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 SNCBQ16143 134 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 FAM114A1Q8IWE2 563 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 TCP11Q8WWU5 503 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 TAF4BQ92750 862 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 DHTKD1Q96HY7 919 aaPredicted RBP10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 PYM1Q9BRP8 204 aaKnown RBP10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 TRIM9Q9C026 710 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 DDX47Q9H0S4 455 aaKnown RBP10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 VCPKMTQ9H867 229 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 DDX20Q9UHI6 824 aaKnown RBP10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 STX8Q9UNK0 236 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 VPS9D1Q9Y2B5 631 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 COL16A1Q07092 1604 aaPredicted RBP10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 FAM107AO95990 144 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 PPP1R7Q15435 360 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 CYB5D1Q6P9G0 228 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 DZIP3Q86Y13 1208 aaKnown RBP10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 NELFCDQ8IXH7 590 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 OSBPL7Q9BZF2 842 aa10.86□□□□□ -0.67
PTCHD4-202ENST00000398738 GMNCA6NCL1 334 aa10.85□□□□□ -0.67
PTCHD4-202ENST00000398738 CLTAP09496 248 aa10.85□□□□□ -0.67
PTCHD4-202ENST00000398738 EPB41P11171 864 aaKnown RBP10.85□□□□□ -0.67
PTCHD4-202ENST00000398738 FLT3P36888 993 aa10.85□□□□□ -0.67
PTCHD4-202ENST00000398738 IFFO1Q0D2I5 559 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms