RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 POTEIP0CG38 1075 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 UBE4AQ14139 1066 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 KRT71Q3SY84 523 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 POTEGQ6S5H5 508 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 POTEEQ6S8J3 1075 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 MYOCDQ8IZQ8 938 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 BLOC1S4Q9NUP1 217 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 GRIN2DO15399 1336 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 SETQ01105 290 aaPredicted RBP18.4■□□□□ 0.54
SIPA1-201ENST00000394224 KCNMA1Q12791 1236 aa18.4■□□□□ 0.54
SIPA1-201ENST00000394224 CCDC38Q502W7 563 aa18.4■□□□□ 0.54
SIPA1-201ENST00000394224 C12orf60Q5U649 245 aa18.4■□□□□ 0.54
SIPA1-201ENST00000394224 MMS22LQ6ZRQ5 1243 aa18.4■□□□□ 0.54
SIPA1-201ENST00000394224 DAAM2Q86T65 1068 aa18.4■□□□□ 0.54
SIPA1-201ENST00000394224 GPBP1Q86WP2 473 aa18.4■□□□□ 0.54
SIPA1-201ENST00000394224 PYM1Q9BRP8 204 aaKnown RBP18.4■□□□□ 0.54
SIPA1-201ENST00000394224 CDK8P49336 464 aa18.4■□□□□ 0.54
SIPA1-201ENST00000394224 RPS6KA1Q15418 735 aa18.4■□□□□ 0.54
SIPA1-201ENST00000394224 ARHGAP44Q17R89 818 aa18.4■□□□□ 0.54
SIPA1-201ENST00000394224 U2AF1L4Q8WU68 220 aaKnown RBP18.4■□□□□ 0.54
SIPA1-201ENST00000394224 CCT8L2Q96SF2 557 aa18.4■□□□□ 0.54
SIPA1-201ENST00000394224 VIPAS39Q9H9C1 493 aa18.4■□□□□ 0.54
SIPA1-201ENST00000394224 KRIT1O00522 736 aa18.4■□□□□ 0.54
SIPA1-201ENST00000394224 FAM26FQ5R3K3 315 aa18.4■□□□□ 0.54
SIPA1-201ENST00000394224 DPP8Q6V1X1 898 aaPredicted RBP18.4■□□□□ 0.54
SIPA1-201ENST00000394224 PHLDB2Q86SQ0 1253 aa18.4■□□□□ 0.54
SIPA1-201ENST00000394224 ATP8A2Q9NTI2 1148 aa18.4■□□□□ 0.54
SIPA1-201ENST00000394224 ZNF652Q9Y2D9 606 aa18.4■□□□□ 0.54
SIPA1-201ENST00000394224 TAF1P21675 1872 aa18.39■□□□□ 0.54
SIPA1-201ENST00000394224 COL5A2P05997 1499 aaPredicted RBP18.39■□□□□ 0.54
SIPA1-201ENST00000394224 KRT13P13646 458 aa18.39■□□□□ 0.53
SIPA1-201ENST00000394224 CDC25CP30307 473 aa18.39■□□□□ 0.53
SIPA1-201ENST00000394224 RDXP35241 583 aaKnown RBP18.39■□□□□ 0.53
SIPA1-201ENST00000394224 SLC20A2Q08357 652 aa18.39■□□□□ 0.53
SIPA1-201ENST00000394224 KCNA1Q09470 495 aa18.39■□□□□ 0.53
SIPA1-201ENST00000394224 AADACL2Q6P093 401 aa18.39■□□□□ 0.53
SIPA1-201ENST00000394224 CPLX4Q7Z7G2 160 aa18.39■□□□□ 0.53
SIPA1-201ENST00000394224 TICAM2Q86XR7 235 aa18.39■□□□□ 0.53
SIPA1-201ENST00000394224 BSDC1Q9NW68 430 aaPredicted RBP18.39■□□□□ 0.53
SIPA1-201ENST00000394224 SIK3Q9Y2K2 1263 aa18.39■□□□□ 0.53
SIPA1-201ENST00000394224 TARSL2A2RTX5 802 aaKnown RBP18.39■□□□□ 0.53
SIPA1-201ENST00000394224 FOXO6A8MYZ6 492 aa18.39■□□□□ 0.53
SIPA1-201ENST00000394224 GOLGA8KD6RF30 607 aa18.39■□□□□ 0.53
SIPA1-201ENST00000394224 LRRN2O75325 713 aa18.39■□□□□ 0.53
SIPA1-201ENST00000394224 GNA11P29992 359 aa18.39■□□□□ 0.53
SIPA1-201ENST00000394224 AEBP2Q6ZN18 517 aaPredicted RBP18.39■□□□□ 0.53
SIPA1-201ENST00000394224 FNBP4Q8N3X1 1017 aaPredicted RBP18.39■□□□□ 0.53
SIPA1-201ENST00000394224 THOC1Q96FV9 657 aaKnown RBP18.39■□□□□ 0.53
SIPA1-201ENST00000394224 PNMA5Q96PV4 448 aa18.39■□□□□ 0.53
SIPA1-201ENST00000394224 PCDHA12Q9UN75 941 aa18.39■□□□□ 0.53
SIPA1-201ENST00000394224 FLT1P17948 1338 aa18.39■□□□□ 0.53
SIPA1-201ENST00000394224 PTK2Q05397 1052 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 PAK2Q13177 524 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 KCNB1Q14721 858 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 FAM98CQ17RN3 349 aaKnown RBP18.38■□□□□ 0.53
SIPA1-201ENST00000394224 SPRED3Q2MJR0 410 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 PARP10Q53GL7 1025 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 KCNV1Q6PIU1 500 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 ADAM33Q9BZ11 813 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 TTI1O43156 1089 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 GFPT2O94808 682 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 RASA1P20936 1047 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 NR2F2P24468 414 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 ASIC2Q16515 512 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 PDXDC1Q6P996 788 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 CCDC84Q86UT8 332 aaPredicted RBP18.38■□□□□ 0.53
SIPA1-201ENST00000394224 CABS1Q96KC9 395 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 RPGRIP1Q96KN7 1286 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 CCSER1Q9C0I3 900 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 CD2APQ9Y5K6 639 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 ANO9A1A5B4 782 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 OPLAHO14841 1288 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 PDHBP11177 359 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 CDR1P51861 262 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 CASP5P51878 434 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 TUBB4BP68371 445 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 COASYQ13057 564 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 OTUD6AQ7L8S5 288 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 ZSCAN29Q8IWY8 852 aaPredicted RBP18.38■□□□□ 0.53
SIPA1-201ENST00000394224 ZNF473Q8WTR7 871 aaKnown RBP18.38■□□□□ 0.53
SIPA1-201ENST00000394224 LBHD1Q9BQE6 289 aaPredicted RBP18.38■□□□□ 0.53
SIPA1-201ENST00000394224 NEUROG2Q9H2A3 272 aa18.38■□□□□ 0.53
SIPA1-201ENST00000394224 MAGOHP61326 146 aaKnown RBP18.37■□□□□ 0.53
SIPA1-201ENST00000394224 MAGOHBQ96A72 148 aaKnown RBP18.37■□□□□ 0.53
SIPA1-201ENST00000394224 FBXL5Q9UKA1 691 aa18.37■□□□□ 0.53
SIPA1-201ENST00000394224 PTPN22Q9Y2R2 807 aa18.37■□□□□ 0.53
SIPA1-201ENST00000394224 GCOM1H8Y6P7 765 aaPredicted RBP18.37■□□□□ 0.53
SIPA1-201ENST00000394224 MYZAPP0CAP1 466 aa18.37■□□□□ 0.53
SIPA1-201ENST00000394224 FECHP22830 423 aa18.37■□□□□ 0.53
SIPA1-201ENST00000394224 QPCTQ16769 361 aa18.37■□□□□ 0.53
SIPA1-201ENST00000394224 GLG1Q92896 1179 aa18.37■□□□□ 0.53
SIPA1-201ENST00000394224 COL4A3BPQ9Y5P4 624 aa18.37■□□□□ 0.53
SIPA1-201ENST00000394224 SIPA1L3O60292 1781 aaPredicted RBP18.37■□□□□ 0.53
SIPA1-201ENST00000394224 ERVK-9P63128 1117 aa18.37■□□□□ 0.53
SIPA1-201ENST00000394224 CT47A1Q5JQC4 288 aaPredicted RBP18.37■□□□□ 0.53
SIPA1-201ENST00000394224 KRT25Q7Z3Z0 450 aa18.37■□□□□ 0.53
SIPA1-201ENST00000394224 PNMA8AQ86V59 439 aaPredicted RBP18.37■□□□□ 0.53
SIPA1-201ENST00000394224 DDX25Q9UHL0 483 aaKnown RBP18.37■□□□□ 0.53
SIPA1-201ENST00000394224 KIF13AQ9H1H9 1805 aa18.37■□□□□ 0.53
SIPA1-201ENST00000394224 RSPH10B2B2RC85 870 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms