RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 CHRNA2Q15822 529 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 BRDTQ58F21 947 aaPredicted RBP4.32□□□□□ -1.72
PTPRC-205ENST00000391970 FIGNQ5HY92 759 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 XP32Q5T750 250 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 STEAP3Q658P3 488 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 BICRALQ6AI39 1079 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 FSTL4Q6MZW2 842 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 CYP4F22Q6NT55 531 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 FKBP9P1Q75LS8 142 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 SPATS2Q86XZ4 545 aaKnown RBP4.32□□□□□ -1.72
PTPRC-205ENST00000391970 PTRH1Q86Y79 214 aaKnown RBP4.32□□□□□ -1.72
PTPRC-205ENST00000391970 DCP2Q8IU60 420 aaKnown RBP4.32□□□□□ -1.72
PTPRC-205ENST00000391970 NOSTRINQ8IVI9 506 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 ABI1Q8IZP0 508 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 FLAD1Q8NFF5 587 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 CHTF18Q8WVB6 975 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 GPR101Q96P66 508 aaPredicted RBP4.32□□□□□ -1.72
PTPRC-205ENST00000391970 IRF2BPLQ9H1B7 796 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 EMC7Q9NPA0 242 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 THG1LQ9NWX6 298 aaKnown RBP4.32□□□□□ -1.72
PTPRC-205ENST00000391970 DSEQ9UL01 958 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 SRPK3Q9UPE1 567 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 KCNK3O14649 394 aa4.31□□□□□ -1.72
PTPRC-205ENST00000391970 MAFKO60675 156 aa4.31□□□□□ -1.72
PTPRC-205ENST00000391970 TADA3O75528 432 aa4.31□□□□□ -1.72
PTPRC-205ENST00000391970 DBHP09172 617 aa4.31□□□□□ -1.72
PTPRC-205ENST00000391970 ZBTB48P10074 688 aaPredicted RBP4.31□□□□□ -1.72
PTPRC-205ENST00000391970 ARL4AP40617 200 aa4.31□□□□□ -1.72
PTPRC-205ENST00000391970 GUCY2FP51841 1108 aa4.31□□□□□ -1.72
PTPRC-205ENST00000391970 KPNA1P52294 538 aaPredicted RBP4.31□□□□□ -1.72
PTPRC-205ENST00000391970 ERVFRD-1P60508 538 aa4.31□□□□□ -1.72
PTPRC-205ENST00000391970 TMPRSS15P98073 1019 aa4.31□□□□□ -1.72
PTPRC-205ENST00000391970 IRF9Q00978 393 aa4.31□□□□□ -1.72
PTPRC-205ENST00000391970 EXOSC10Q01780 885 aaKnown RBP4.31□□□□□ -1.72
PTPRC-205ENST00000391970 OCRLQ01968 901 aa4.31□□□□□ -1.72
PTPRC-205ENST00000391970 SIRT2Q8IXJ6 389 aa4.31□□□□□ -1.72
PTPRC-205ENST00000391970 ABHD4Q8TB40 342 aa4.31□□□□□ -1.72
PTPRC-205ENST00000391970 SEC14L1Q92503 715 aa4.31□□□□□ -1.72
PTPRC-205ENST00000391970 CD244Q9BZW8 370 aa4.31□□□□□ -1.72
PTPRC-205ENST00000391970 RNF32Q9H0A6 362 aa4.31□□□□□ -1.72
PTPRC-205ENST00000391970 AP5M1Q9H0R1 490 aa4.31□□□□□ -1.72
PTPRC-205ENST00000391970 SPTLC3Q9NUV7 552 aa4.31□□□□□ -1.72
PTPRC-205ENST00000391970 OXSMQ9NWU1 459 aa4.31□□□□□ -1.72
PTPRC-205ENST00000391970 SLC5A4Q9NY91 659 aa4.31□□□□□ -1.72
PTPRC-205ENST00000391970 H2AFY2Q9P0M6 372 aaPredicted RBP4.31□□□□□ -1.72
PTPRC-205ENST00000391970 KLHL42Q9P2K6 505 aa4.31□□□□□ -1.72
PTPRC-205ENST00000391970 ZNF652Q9Y2D9 606 aa4.31□□□□□ -1.72
PTPRC-205ENST00000391970 YBX2Q9Y2T7 364 aaKnown RBP4.31□□□□□ -1.72
PTPRC-205ENST00000391970 WASHC2CQ9Y4E1 1318 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 H7C1D1 291 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 DVL2O14641 736 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 HGSO14964 777 aaPredicted RBP4.3□□□□□ -1.72
PTPRC-205ENST00000391970 SGSM2O43147 1006 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 CLASP2O75122 1294 aaKnown RBP4.3□□□□□ -1.72
PTPRC-205ENST00000391970 KATNA1O75449 491 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 KRT37O76014 449 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 CYBBP04839 570 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 AFMP43652 599 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 EPHA5P54756 1037 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 GP2P55259 537 aaKnown RBP4.3□□□□□ -1.72
PTPRC-205ENST00000391970 ATP13A4Q4VNC1 1196 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 PAQR3Q6TCH7 311 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 KCTD1Q719H9 257 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 NLGN4XQ8N0W4 816 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 EFHBQ8N7U6 833 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 PHOSPHO1Q8TCT1 267 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 CEP89Q96ST8 783 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 PDGFDQ9GZP0 370 aaPredicted RBP4.3□□□□□ -1.72
PTPRC-205ENST00000391970 PUS7LQ9H0K6 701 aaKnown RBP4.3□□□□□ -1.72
PTPRC-205ENST00000391970 SMOC1Q9H4F8 434 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 METTL14Q9HCE5 456 aaKnown RBP4.3□□□□□ -1.72
PTPRC-205ENST00000391970 MYOTQ9UBF9 498 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 SIT1Q9Y3P8 196 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 TELO2Q9Y4R8 837 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 NUB1Q9Y5A7 615 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 ATP23Q9Y6H3 246 aa4.3□□□□□ -1.72
PTPRC-205ENST00000391970 ZC3H12DA2A288 527 aaKnown RBP4.29□□□□□ -1.72
PTPRC-205ENST00000391970 SCDO00767 359 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 SLC27A2O14975 620 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 TGM5O43548 720 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 HIP1RO75146 1068 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 ULK1O75385 1050 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 S100BP04271 92 aaPredicted RBP4.29□□□□□ -1.72
PTPRC-205ENST00000391970 MTMR1Q13613 665 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 SEC23AQ15436 765 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 ARTNQ5T4W7 220 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 FYB2Q5VWT5 728 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 CPZQ66K79 652 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 CBLL1Q75N03 491 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.29□□□□□ -1.72
PTPRC-205ENST00000391970 C11orf74Q86VG3 221 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 KIAA1958Q8N8K9 716 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 COG1Q8WTW3 980 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 DLG3Q92796 817 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 PEX11GQ96HA9 241 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 INTS4Q96HW7 963 aaKnown RBP4.29□□□□□ -1.72
PTPRC-205ENST00000391970 KIRREL1Q96J84 757 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 ASPSCR1Q9BZE9 553 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 RXFP1Q9HBX9 757 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 ASH2LQ9UBL3 628 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms