RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 GMCL1P1Q8NEA9 526 aa13.55□□□□□ -0.24
UBR4-203ENST00000375225 NEK11Q8NG66 645 aa13.55□□□□□ -0.24
UBR4-203ENST00000375225 GMCL1Q96IK5 515 aa13.55□□□□□ -0.24
UBR4-203ENST00000375225 CHP1Q99653 195 aa13.55□□□□□ -0.24
UBR4-203ENST00000375225 ANO3Q9BYT9 981 aa13.55□□□□□ -0.24
UBR4-203ENST00000375225 DNAJC18Q9H819 358 aa13.55□□□□□ -0.24
UBR4-203ENST00000375225 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.55□□□□□ -0.24
UBR4-203ENST00000375225 PRDM10Q9NQV6 1147 aa13.55□□□□□ -0.24
UBR4-203ENST00000375225 PANK4Q9NVE7 773 aa13.55□□□□□ -0.24
UBR4-203ENST00000375225 ZNF446Q9NWS9 450 aa13.55□□□□□ -0.24
UBR4-203ENST00000375225 RNF181Q9P0P0 153 aa13.55□□□□□ -0.24
UBR4-203ENST00000375225 FAM184BQ9ULE4 1060 aa13.55□□□□□ -0.24
UBR4-203ENST00000375225 PCDHA1Q9Y5I3 950 aa13.55□□□□□ -0.24
UBR4-203ENST00000375225 PITPNM2Q9BZ72 1349 aa13.55□□□□□ -0.24
UBR4-203ENST00000375225 POTEMA6NI47 508 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 SPDYE3A6NKU9 549 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 TACC1O75410 805 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 KRT18P05783 430 aaKnown RBP13.54□□□□□ -0.24
UBR4-203ENST00000375225 VAV2P52735 878 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 ICA1Q05084 483 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 CDC37Q16543 378 aaPredicted RBP13.54□□□□□ -0.24
UBR4-203ENST00000375225 UBE2SQ16763 222 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 ABCB5Q2M3G0 1257 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 CCDC40Q4G0X9 1142 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 MIIPQ5JXC2 388 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 FAM26FQ5R3K3 315 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 KCTD1Q719H9 257 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 DYMQ7RTS9 669 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 HDXQ7Z353 690 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 ALS2CR12Q96Q35 445 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 IRX2Q9BZI1 471 aaPredicted RBP13.54□□□□□ -0.24
UBR4-203ENST00000375225 SEMA6BQ9H3T3 888 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 EHMT1Q9H9B1 1298 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 RAB21Q9UL25 225 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 COL4A3BPQ9Y5P4 624 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 SAR1BQ9Y6B6 198 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 SHTN1A0MZ66 631 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 FAM196BA6NMK8 535 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 YBX3P16989 372 aaKnown RBP eCLIP13.54□□□□□ -0.24
UBR4-203ENST00000375225 COASYQ13057 564 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 QRICH1Q2TAL8 776 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 TBC1D10BQ4KMP7 808 aaPredicted RBP13.54□□□□□ -0.24
UBR4-203ENST00000375225 TTBK2Q6IQ55 1244 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 CACNA2D4Q7Z3S7 1137 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 TRIM58Q8NG06 486 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 LRRC15Q8TF66 581 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 SECISBP2LQ93073 1101 aaKnown RBP13.54□□□□□ -0.24
UBR4-203ENST00000375225 FAM20AQ96MK3 541 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 MBOAT7Q96N66 472 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 TANGO6Q9C0B7 1094 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 PUF60Q9UHX1 559 aaKnown RBP13.54□□□□□ -0.24
UBR4-203ENST00000375225 PLAGL2Q9UPG8 496 aa13.54□□□□□ -0.24
UBR4-203ENST00000375225 MYH7BA7E2Y1 1941 aa13.53□□□□□ -0.24
UBR4-203ENST00000375225 RNF225M0QZC1 329 aaPredicted RBP13.53□□□□□ -0.24
UBR4-203ENST00000375225 RAD21O60216 631 aa13.53□□□□□ -0.24
UBR4-203ENST00000375225 TBC1D12O60347 775 aa13.53□□□□□ -0.24
UBR4-203ENST00000375225 PLA2G4BP0C869 781 aa13.53□□□□□ -0.24
UBR4-203ENST00000375225 EEF2P13639 858 aaKnown RBP13.53□□□□□ -0.24
UBR4-203ENST00000375225 EPS15P42566 896 aa13.53□□□□□ -0.24
UBR4-203ENST00000375225 EHHADHQ08426 723 aa13.53□□□□□ -0.24
UBR4-203ENST00000375225 IKQ13123 557 aaPredicted RBP13.53□□□□□ -0.24
UBR4-203ENST00000375225 TERF2Q15554 542 aa13.53□□□□□ -0.24
UBR4-203ENST00000375225 Q4G0T1 1027 aa13.53□□□□□ -0.24
UBR4-203ENST00000375225 PAPD7Q5XG87 772 aaKnown RBP13.53□□□□□ -0.24
UBR4-203ENST00000375225 WDR59Q6PJI9 974 aa13.53□□□□□ -0.24
UBR4-203ENST00000375225 TRAPPC11Q7Z392 1133 aa13.53□□□□□ -0.24
UBR4-203ENST00000375225 SAMD7Q7Z3H4 446 aa13.53□□□□□ -0.24
UBR4-203ENST00000375225 FBXO11Q86XK2 927 aa13.53□□□□□ -0.24
UBR4-203ENST00000375225 CCDC155Q8N6L0 562 aa13.53□□□□□ -0.24
UBR4-203ENST00000375225 RUBCNQ92622 972 aa13.53□□□□□ -0.24
UBR4-203ENST00000375225 SYN2Q92777 582 aaPredicted RBP13.53□□□□□ -0.24
UBR4-203ENST00000375225 TMEM39BQ9GZU3 492 aa13.53□□□□□ -0.24
UBR4-203ENST00000375225 MMRN2Q9H8L6 949 aa13.53□□□□□ -0.24
UBR4-203ENST00000375225 GPRC5DQ9NZD1 345 aa13.53□□□□□ -0.24
UBR4-203ENST00000375225 SSU72P8A0A1W2PR75 194 aa13.52□□□□□ -0.25
UBR4-203ENST00000375225 CCDC66A2RUB6 948 aa13.52□□□□□ -0.25
UBR4-203ENST00000375225 TRAF5O00463 557 aa13.52□□□□□ -0.25
UBR4-203ENST00000375225 PPP1R11O60927 126 aaPredicted RBP13.52□□□□□ -0.25
UBR4-203ENST00000375225 SSBP05455 408 aaKnown RBP eCLIP13.52□□□□□ -0.25
UBR4-203ENST00000375225 SLC16A2P36021 539 aa13.52□□□□□ -0.25
UBR4-203ENST00000375225 HERVK_113P62684 666 aa13.52□□□□□ -0.25
UBR4-203ENST00000375225 SYDE2Q5VT97 1194 aa13.52□□□□□ -0.25
UBR4-203ENST00000375225 TAF3Q5VWG9 929 aa13.52□□□□□ -0.25
UBR4-203ENST00000375225 GPBP1Q86WP2 473 aa13.52□□□□□ -0.25
UBR4-203ENST00000375225 APOBEC3FQ8IUX4 373 aaKnown RBP13.52□□□□□ -0.25
UBR4-203ENST00000375225 CAGE1Q8TC20 777 aa13.52□□□□□ -0.25
UBR4-203ENST00000375225 HAS1Q92839 578 aa13.52□□□□□ -0.25
UBR4-203ENST00000375225 ARHGEF10LQ9HCE6 1279 aa13.52□□□□□ -0.25
UBR4-203ENST00000375225 KCNMB3Q9NPA1 279 aa13.52□□□□□ -0.25
UBR4-203ENST00000375225 AGPAT5Q9NUQ2 364 aa13.52□□□□□ -0.25
UBR4-203ENST00000375225 HACL1Q9UJ83 578 aa13.52□□□□□ -0.25
UBR4-203ENST00000375225 TSKSQ9UJT2 592 aa13.52□□□□□ -0.25
UBR4-203ENST00000375225 AKR1B10O60218 316 aa13.51□□□□□ -0.25
UBR4-203ENST00000375225 GDF11O95390 407 aa13.51□□□□□ -0.25
UBR4-203ENST00000375225 MARSP56192 900 aaKnown RBP13.51□□□□□ -0.25
UBR4-203ENST00000375225 AMPD2Q01433 879 aa13.51□□□□□ -0.25
UBR4-203ENST00000375225 RASA3Q14644 834 aa13.51□□□□□ -0.25
UBR4-203ENST00000375225 GPR162Q16538 588 aa13.51□□□□□ -0.25
UBR4-203ENST00000375225 LONRF2Q1L5Z9 754 aa13.51□□□□□ -0.25
UBR4-203ENST00000375225 EDRF1Q3B7T1 1238 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms