RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 VGLL3A8MV65 326 aa19.41■□□□□ 0.7
TRAF3IP1-201ENST00000373327 FAM83BQ5T0W9 1011 aa19.41■□□□□ 0.7
TRAF3IP1-201ENST00000373327 MRRFQ96E11 262 aaKnown RBP19.41■□□□□ 0.7
TRAF3IP1-201ENST00000373327 DNAJC5Q9H3Z4 198 aa19.41■□□□□ 0.7
TRAF3IP1-201ENST00000373327 PALM3A6NDB9 673 aaPredicted RBP19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 GCOM1H8Y6P7 765 aaPredicted RBP19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 RHOBTB3O94955 611 aa19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 POLR2MP0CAP2 368 aa19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 VPS41P49754 854 aa19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 ZNF543Q08ER8 600 aa19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 SYDE2Q5VT97 1194 aa19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 HEXIM1O94992 359 aaKnown RBP19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 MIER3Q7Z3K6 550 aa19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 CCDC50Q8IVM0 306 aa19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 GCNT4Q9P109 453 aa19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 SWAP70Q9UH65 585 aa19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 GOLGA6L10A0A0M3HER8 536 aa19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 GOLGA8IPA6NC78 632 aa19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 GOLGA8JA6NMD2 632 aa19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 NDUFAB1O14561 156 aa19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 GBP6Q6ZN66 633 aa19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 IFT20Q8IY31 132 aa19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 SLFN12Q8IYM2 578 aa19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 MAGEF1Q9HAY2 307 aa19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 CAPN11Q9UMQ6 739 aa19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 ZBTB12Q9Y330 459 aaPredicted RBP19.4■□□□□ 0.7
TRAF3IP1-201ENST00000373327 PALMO75781 387 aa19.39■□□□□ 0.7
TRAF3IP1-201ENST00000373327 DLATP10515 647 aaKnown RBP19.39■□□□□ 0.7
TRAF3IP1-201ENST00000373327 CDKAL1Q5VV42 579 aa19.39■□□□□ 0.7
TRAF3IP1-201ENST00000373327 PPM1KQ8N3J5 372 aa19.39■□□□□ 0.7
TRAF3IP1-201ENST00000373327 KDM3BQ7LBC6 1761 aa19.39■□□□□ 0.69
TRAF3IP1-201ENST00000373327 EBAG9O00559 213 aa19.39■□□□□ 0.69
TRAF3IP1-201ENST00000373327 TCP1P17987 556 aaKnown RBP19.39■□□□□ 0.69
TRAF3IP1-201ENST00000373327 KCNH2Q12809 1159 aa19.39■□□□□ 0.69
TRAF3IP1-201ENST00000373327 FAM102BQ5T8I3 360 aa19.39■□□□□ 0.69
TRAF3IP1-201ENST00000373327 SCLT1Q96NL6 688 aa19.39■□□□□ 0.69
TRAF3IP1-201ENST00000373327 NAP1L4Q99733 375 aaKnown RBP19.39■□□□□ 0.69
TRAF3IP1-201ENST00000373327 CCPG1Q9ULG6 757 aa19.39■□□□□ 0.69
TRAF3IP1-201ENST00000373327 LMO7Q8WWI1 1683 aa19.39■□□□□ 0.69
TRAF3IP1-201ENST00000373327 GPR75-ASB3A0A0A6YYF3 556 aa19.39■□□□□ 0.69
TRAF3IP1-201ENST00000373327 KRIT1O00522 736 aa19.39■□□□□ 0.69
TRAF3IP1-201ENST00000373327 VPS72Q15906 364 aa19.39■□□□□ 0.69
TRAF3IP1-201ENST00000373327 ZNF577Q9BSK1 485 aa19.39■□□□□ 0.69
TRAF3IP1-201ENST00000373327 ZNF446Q9NWS9 450 aa19.39■□□□□ 0.69
TRAF3IP1-201ENST00000373327 TUBBP07437 444 aa19.39■□□□□ 0.69
TRAF3IP1-201ENST00000373327 GYS1P13807 737 aa19.39■□□□□ 0.69
TRAF3IP1-201ENST00000373327 PLA2G4AP47712 749 aa19.39■□□□□ 0.69
TRAF3IP1-201ENST00000373327 FUT2Q10981 343 aa19.39■□□□□ 0.69
TRAF3IP1-201ENST00000373327 SLC10A5Q5PT55 438 aa19.39■□□□□ 0.69
TRAF3IP1-201ENST00000373327 CEP85LQ5SZL2 805 aa19.39■□□□□ 0.69
TRAF3IP1-201ENST00000373327 RETREG2Q8NC44 543 aa19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 LMBR1Q8WVP7 490 aa19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 NFU1Q9UMS0 254 aa19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 ECE2O60344 883 aa19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 H2AFZP0C0S5 128 aa19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 TUBB4BP68371 445 aa19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 SHROOM1Q2M3G4 852 aaPredicted RBP19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 BARGINQ6ZT62 677 aa19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 H2AFVQ71UI9 128 aa19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 AMIGO3Q86WK7 504 aa19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 BANK1Q8NDB2 785 aa19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 GLT8D2Q9H1C3 349 aa19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 DDX4Q9NQI0 724 aaKnown RBP19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 LRRC37A3O60309 1634 aa19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 MYL1P05976 194 aa19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 GNGT1P63211 74 aa19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 MKRN4PQ13434 485 aaPredicted RBP19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 FAM186BQ8IYM0 893 aa19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 MTRQ99707 1265 aa19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 RIC8AQ9NPQ8 531 aa19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 PPANQ9NQ55 473 aaKnown RBP19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 JRKLQ9Y4A0 524 aa19.38■□□□□ 0.69
TRAF3IP1-201ENST00000373327 CNTNAP4Q9C0A0 1308 aa19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 EIF2AK2P19525 551 aaKnown RBP19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 KCNJ6P48051 423 aa19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 ZFPM1Q8IX07 1006 aa19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 MED15Q96RN5 788 aa19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 PAIP2Q9BPZ3 127 aaKnown RBP19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 FHOD1Q9Y613 1164 aa19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 TRIM49P0CI25 452 aa19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 TRIM49CP0CI26 452 aa19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 SRGNP10124 158 aa19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 NPR1P16066 1061 aa19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 RC3H1Q5TC82 1133 aaKnown RBP19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 CCDC170Q8IYT3 715 aa19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 IVLP07476 585 aa19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 STAT2P52630 851 aa19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 GRB10Q13322 594 aa19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 KCNB1Q14721 858 aa19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 USTQ9Y2C2 406 aa19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 CCDC172P0C7W6 258 aa19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 LRRC63Q05C16 580 aa19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 XKR9Q5GH70 373 aa19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 CC2D2BQ6DHV5 1058 aa19.37■□□□□ 0.69
TRAF3IP1-201ENST00000373327 AFPP02771 609 aaKnown RBP19.36■□□□□ 0.69
TRAF3IP1-201ENST00000373327 NMT1P30419 496 aaKnown RBP19.36■□□□□ 0.69
TRAF3IP1-201ENST00000373327 TTI2Q6NXR4 508 aa19.36■□□□□ 0.69
TRAF3IP1-201ENST00000373327 KCNK18Q7Z418 384 aa19.36■□□□□ 0.69
TRAF3IP1-201ENST00000373327 LRRC1Q9BTT6 524 aa19.36■□□□□ 0.69
TRAF3IP1-201ENST00000373327 SEMA6BQ9H3T3 888 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms