RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 ATP1A1P05023 1023 aaKnown RBP12.74□□□□□ -0.37
COPA-202ENST00000368069 GFPT1Q06210 699 aaPredicted RBP12.74□□□□□ -0.37
COPA-202ENST00000368069 HHATQ5VTY9 493 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 EMBQ6PCB8 327 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 PPP4R3CPQ6ZMV5 832 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 NLGN1Q8N2Q7 840 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 HOMER3Q9NSC5 361 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 CEP72Q9P209 647 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 DAAM1Q9Y4D1 1078 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 MEGF6O75095 1541 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 SORBS3O60504 671 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 STX2P32856 288 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 COASYQ13057 564 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 KCNB1Q14721 858 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 C10orf76Q5T2E6 689 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 C12orf60Q5U649 245 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 FYB2Q5VWT5 728 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 ALS2CLQ60I27 953 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 NIM1KQ8IY84 436 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 SREK1Q8WXA9 508 aaKnown RBP12.74□□□□□ -0.37
COPA-202ENST00000368069 AP1M1Q9BXS5 423 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 PCIF1Q9H4Z3 704 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 VPS37BQ9H9H4 285 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 USP17L15C9J2P7 530 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 USP17L13C9JLJ4 530 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 USP17L11C9JVI0 530 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 USP17L18D6R9N7 530 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 USP17L22D6RA61 530 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 USP17L17D6RBQ6 530 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 USP17L19D6RCP7 530 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 USP17L20D6RJB6 530 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 ZBTB5O15062 677 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 TDP2O95551 362 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 LIG4P49917 911 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 ATP11AP98196 1134 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 USP17L24Q0WX57 530 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 USP17L6PQ6QN14 398 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 DEPTORQ8TB45 409 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 DHX36Q9H2U1 1008 aaKnown RBP12.73□□□□□ -0.37
COPA-202ENST00000368069 CAPN11Q9UMQ6 739 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 ATP8A1Q9Y2Q0 1164 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 EIF3CLB5ME19 914 aaKnown RBP12.73□□□□□ -0.37
COPA-202ENST00000368069 TRIM37O94972 964 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 NAA25Q14CX7 972 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 NFRKBQ6P4R8 1299 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 PROM2Q8N271 834 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 NACC1Q96RE7 527 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 EIF3CQ99613 913 aaKnown RBP12.73□□□□□ -0.37
COPA-202ENST00000368069 PARVGQ9HBI0 331 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 PI4KBQ9UBF8 816 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 PTPN22Q9Y2R2 807 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 KDM6AO15550 1401 aaPredicted RBP12.73□□□□□ -0.37
COPA-202ENST00000368069 IFNB1P01574 187 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 VSNL1P62760 191 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 DMP1Q13316 513 aaPredicted RBP12.73□□□□□ -0.37
COPA-202ENST00000368069 ANKRD40Q6AI12 368 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 MCF2L2Q86YR7 1114 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 ADSSL1Q8N142 457 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 WDR11Q9BZH6 1224 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 TXNDC16Q9P2K2 825 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 BAIAP2L1Q9UHR4 511 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 PASKQ96RG2 1323 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 NCK2O43639 380 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 BUB1BO60566 1050 aaPredicted RBP12.73□□□□□ -0.37
COPA-202ENST00000368069 CAMTA2O94983 1202 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 USP14P54578 494 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 PLTPP55058 493 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 DHX9Q08211 1270 aaKnown RBP12.73□□□□□ -0.37
COPA-202ENST00000368069 CTTNQ14247 550 aaKnown RBP12.73□□□□□ -0.37
COPA-202ENST00000368069 RASGRP2Q7LDG7 609 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 WHAMMQ8TF30 809 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 AGXT2Q9BYV1 514 aa12.73□□□□□ -0.37
COPA-202ENST00000368069 CACNB3P54284 484 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 SMIM5Q71RC9 77 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 COA1Q9GZY4 146 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 POTEB3A0JP26 581 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 SFI1A8K8P3 1242 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 POTECB2RU33 542 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 USP17L10C9JJH3 530 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 NOP56O00567 594 aaKnown RBP12.72□□□□□ -0.37
COPA-202ENST00000368069 KRT19P08727 400 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 GGCXP38435 758 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 IFT88Q13099 833 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 POTEBQ6S5H4 581 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 GUF1Q8N442 669 aaKnown RBP12.72□□□□□ -0.37
COPA-202ENST00000368069 GRK7Q8WTQ7 553 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 HPS3Q969F9 1004 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 MAP3K14Q99558 947 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 TRIM9Q9C026 710 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 CCSER1Q9C0I3 900 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 SERPINA10Q9UK55 444 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 ITIH6Q6UXX5 1313 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 FAM83BQ5T0W9 1011 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 SFR1Q86XK3 245 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 NEDD1Q8NHV4 660 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 POMGNT1Q8WZA1 660 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 ZNF653Q96CK0 615 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 NT5C1BQ96P26 610 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 OSBPL9Q96SU4 736 aa12.72□□□□□ -0.37
COPA-202ENST00000368069 HPSEQ9Y251 543 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms