RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 CCT8L2Q96SF2 557 aa19.41■□□□□ 0.7
SMG5-201ENST00000361813 TYW1Q9NV66 732 aaKnown RBP19.41■□□□□ 0.7
SMG5-201ENST00000361813 EXOC7Q9UPT5 735 aa19.41■□□□□ 0.7
SMG5-201ENST00000361813 I3L4J1 428 aa19.41■□□□□ 0.7
SMG5-201ENST00000361813 SLC16A2P36021 539 aa19.41■□□□□ 0.7
SMG5-201ENST00000361813 IL6STP40189 918 aaPredicted RBP19.41■□□□□ 0.7
SMG5-201ENST00000361813 PSMD2Q13200 908 aa19.41■□□□□ 0.7
SMG5-201ENST00000361813 ODR4Q5SWX8 454 aa19.41■□□□□ 0.7
SMG5-201ENST00000361813 C10orf76Q5T2E6 689 aa19.41■□□□□ 0.7
SMG5-201ENST00000361813 P3H4Q92791 437 aa19.41■□□□□ 0.7
SMG5-201ENST00000361813 CEP72Q9P209 647 aa19.41■□□□□ 0.7
SMG5-201ENST00000361813 RABGAP1Q9Y3P9 1069 aa19.41■□□□□ 0.7
SMG5-201ENST00000361813 INO80Q9ULG1 1556 aaPredicted RBP19.41■□□□□ 0.7
SMG5-201ENST00000361813 ACSL3O95573 720 aa19.41■□□□□ 0.7
SMG5-201ENST00000361813 GTF2IP78347 998 aa19.41■□□□□ 0.7
SMG5-201ENST00000361813 GRK7Q8WTQ7 553 aa19.41■□□□□ 0.7
SMG5-201ENST00000361813 ZNF148Q9UQR1 794 aa19.41■□□□□ 0.7
SMG5-201ENST00000361813 PSMD14O00487 310 aa19.4■□□□□ 0.7
SMG5-201ENST00000361813 PLA2G4BP0C869 781 aa19.4■□□□□ 0.7
SMG5-201ENST00000361813 SEC24CP53992 1094 aa19.4■□□□□ 0.7
SMG5-201ENST00000361813 MECOMQ03112 1051 aa19.4■□□□□ 0.7
SMG5-201ENST00000361813 RSRC2Q7L4I2 434 aaKnown RBP19.4■□□□□ 0.7
SMG5-201ENST00000361813 ADSSL1Q8N142 457 aa19.4■□□□□ 0.7
SMG5-201ENST00000361813 COL3A1P02461 1466 aaPredicted RBP19.4■□□□□ 0.7
SMG5-201ENST00000361813 ADGRL3Q9HAR2 1447 aa19.4■□□□□ 0.7
SMG5-201ENST00000361813 HSPA2P54652 639 aa19.4■□□□□ 0.7
SMG5-201ENST00000361813 TRIP13Q15645 432 aaPredicted RBP19.4■□□□□ 0.7
SMG5-201ENST00000361813 UBE2SQ16763 222 aa19.4■□□□□ 0.7
SMG5-201ENST00000361813 PHLDB3Q6NSJ2 640 aa19.4■□□□□ 0.7
SMG5-201ENST00000361813 SDCCAG8Q86SQ7 713 aaPredicted RBP19.4■□□□□ 0.7
SMG5-201ENST00000361813 HPSEQ9Y251 543 aa19.4■□□□□ 0.7
SMG5-201ENST00000361813 ZNF804BA4D1E1 1349 aa19.4■□□□□ 0.7
SMG5-201ENST00000361813 ERVK-24P63145 666 aa19.4■□□□□ 0.7
SMG5-201ENST00000361813 RASIP1Q5U651 963 aa19.4■□□□□ 0.7
SMG5-201ENST00000361813 THOC1Q96FV9 657 aaKnown RBP19.4■□□□□ 0.7
SMG5-201ENST00000361813 MYO1EQ12965 1108 aa19.39■□□□□ 0.7
SMG5-201ENST00000361813 DIXDC1Q155Q3 683 aa19.39■□□□□ 0.7
SMG5-201ENST00000361813 CCDC89Q8N998 374 aa19.39■□□□□ 0.7
SMG5-201ENST00000361813 K7ENM7 598 aa19.39■□□□□ 0.69
SMG5-201ENST00000361813 PRPF6O94906 941 aaKnown RBP19.39■□□□□ 0.69
SMG5-201ENST00000361813 RCAN1P53805 252 aa19.39■□□□□ 0.69
SMG5-201ENST00000361813 HDLBPQ00341 1268 aaKnown RBP19.39■□□□□ 0.69
SMG5-201ENST00000361813 MYL7Q01449 175 aa19.39■□□□□ 0.69
SMG5-201ENST00000361813 SGO2Q562F6 1265 aa19.39■□□□□ 0.69
SMG5-201ENST00000361813 SCYL3Q8IZE3 742 aa19.39■□□□□ 0.69
SMG5-201ENST00000361813 MSANTD4Q8NCY6 345 aa19.39■□□□□ 0.69
SMG5-201ENST00000361813 USP40Q9NVE5 1235 aa19.39■□□□□ 0.69
SMG5-201ENST00000361813 FBXL5Q9UKA1 691 aa19.39■□□□□ 0.69
SMG5-201ENST00000361813 ECEL1O95672 775 aa19.39■□□□□ 0.69
SMG5-201ENST00000361813 PSMC2P35998 433 aaKnown RBP19.39■□□□□ 0.69
SMG5-201ENST00000361813 C6orf118Q5T5N4 469 aa19.39■□□□□ 0.69
SMG5-201ENST00000361813 KAZNQ674X7 775 aa19.39■□□□□ 0.69
SMG5-201ENST00000361813 DGKHQ86XP1 1220 aa19.39■□□□□ 0.69
SMG5-201ENST00000361813 PARP9Q8IXQ6 854 aa19.39■□□□□ 0.69
SMG5-201ENST00000361813 PALM2Q8IXS6 379 aa19.39■□□□□ 0.69
SMG5-201ENST00000361813 CFAP61Q8NHU2 1237 aa19.39■□□□□ 0.69
SMG5-201ENST00000361813 VCX3BQ9H321 246 aa19.39■□□□□ 0.69
SMG5-201ENST00000361813 MLXIPLQ9NP71 852 aa19.39■□□□□ 0.69
SMG5-201ENST00000361813 NOP53Q9NZM5 478 aaKnown RBP19.39■□□□□ 0.69
SMG5-201ENST00000361813 MDH1P40925 334 aaKnown RBP19.39■□□□□ 0.69
SMG5-201ENST00000361813 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.39■□□□□ 0.691e-7■■■□□ 18.8
SMG5-201ENST00000361813 ZNF473Q8WTR7 871 aaKnown RBP19.39■□□□□ 0.69
SMG5-201ENST00000361813 BRIP1Q9BX63 1249 aa19.39■□□□□ 0.69
SMG5-201ENST00000361813 TFRCP02786 760 aaKnown RBP19.38■□□□□ 0.69
SMG5-201ENST00000361813 TNNI1P19237 187 aa19.38■□□□□ 0.69
SMG5-201ENST00000361813 OGFOD1Q8N543 542 aa19.38■□□□□ 0.69
SMG5-201ENST00000361813 CCDC110Q8TBZ0 833 aa19.38■□□□□ 0.69
SMG5-201ENST00000361813 EPN3Q9H201 632 aa19.38■□□□□ 0.69
SMG5-201ENST00000361813 RBM12Q9NTZ6 932 aaKnown RBP19.38■□□□□ 0.69
SMG5-201ENST00000361813 SRGNP10124 158 aa19.38■□□□□ 0.69
SMG5-201ENST00000361813 SLMAPQ14BN4 828 aa19.38■□□□□ 0.69
SMG5-201ENST00000361813 NBPF9Q3BBW0 867 aa19.38■□□□□ 0.69
SMG5-201ENST00000361813 SUSD4Q5VX71 490 aa19.38■□□□□ 0.69
SMG5-201ENST00000361813 ARHGEF18Q6ZSZ5 1173 aa19.38■□□□□ 0.69
SMG5-201ENST00000361813 PHLDB2Q86SQ0 1253 aa19.38■□□□□ 0.69
SMG5-201ENST00000361813 MTA3Q9BTC8 594 aa19.38■□□□□ 0.69
SMG5-201ENST00000361813 TRIM6Q9C030 488 aaPredicted RBP19.38■□□□□ 0.69
SMG5-201ENST00000361813 ANKZF1Q9H8Y5 726 aa19.38■□□□□ 0.69
SMG5-201ENST00000361813 LARSQ9P2J5 1176 aaKnown RBP19.38■□□□□ 0.69
SMG5-201ENST00000361813 MYCLP12524 364 aaPredicted RBP19.38■□□□□ 0.69
SMG5-201ENST00000361813 CD44P16070 742 aaKnown RBP19.38■□□□□ 0.69
SMG5-201ENST00000361813 TRAPPC3LQ5T215 181 aa19.38■□□□□ 0.69
SMG5-201ENST00000361813 CPXCR1Q8N123 301 aa19.38■□□□□ 0.69
SMG5-201ENST00000361813 ZNF653Q96CK0 615 aa19.38■□□□□ 0.69
SMG5-201ENST00000361813 PPP1R3GB7ZBB8 358 aa19.37■□□□□ 0.69
SMG5-201ENST00000361813 DAPK3O43293 454 aa19.37■□□□□ 0.69
SMG5-201ENST00000361813 LSP1P33241 339 aa19.37■□□□□ 0.69
SMG5-201ENST00000361813 CARSP49589 748 aaKnown RBP19.37■□□□□ 0.69
SMG5-201ENST00000361813 PDE6CP51160 858 aa19.37■□□□□ 0.69
SMG5-201ENST00000361813 ZNF449Q6P9G9 518 aa19.37■□□□□ 0.69
SMG5-201ENST00000361813 CXorf56Q9H5V9 222 aa19.37■□□□□ 0.69
SMG5-201ENST00000361813 AMACRQ9UHK6 382 aa19.37■□□□□ 0.69
SMG5-201ENST00000361813 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.37■□□□□ 0.69
SMG5-201ENST00000361813 ARAP3Q8WWN8 1544 aa19.37■□□□□ 0.69
SMG5-201ENST00000361813 ARHGAP42A6NI28 874 aa19.37■□□□□ 0.69
SMG5-201ENST00000361813 MYO1FO00160 1098 aa19.37■□□□□ 0.69
SMG5-201ENST00000361813 TMED2Q15363 201 aa19.37■□□□□ 0.69
SMG5-201ENST00000361813 SRBD1Q8N5C6 995 aaKnown RBP19.37■□□□□ 0.69
SMG5-201ENST00000361813 PROCA1Q8NCQ7 364 aaPredicted RBP19.37■□□□□ 0.69
SMG5-201ENST00000361813 PIGBQ92521 554 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms