RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 ITGB3BPQ13352 177 aaPredicted RBP25.98■■□□□ 1.75
SDF4-202ENST00000360001 MCM6Q14566 821 aa25.98■■□□□ 1.75
SDF4-202ENST00000360001 INPP4AQ96PE3 977 aaPredicted RBP25.98■■□□□ 1.75
SDF4-202ENST00000360001 KIAA1024Q9UPX6 916 aa25.98■■□□□ 1.75
SDF4-202ENST00000360001 TESPA1A2RU30 521 aaPredicted RBP25.98■■□□□ 1.75
SDF4-202ENST00000360001 DHX40Q8IX18 779 aaKnown RBP25.98■■□□□ 1.75
SDF4-202ENST00000360001 IWS1Q96ST2 819 aa25.98■■□□□ 1.75
SDF4-202ENST00000360001 EIF2AK1Q9BQI3 630 aaKnown RBP25.98■■□□□ 1.75
SDF4-202ENST00000360001 TRIM9Q9C026 710 aa25.98■■□□□ 1.75
SDF4-202ENST00000360001 UNC45AQ9H3U1 944 aa25.98■■□□□ 1.75
SDF4-202ENST00000360001 MROH8Q9H579 483 aa25.98■■□□□ 1.75
SDF4-202ENST00000360001 POTEB2H3BUK9 544 aa25.97■■□□□ 1.75
SDF4-202ENST00000360001 CHMP2AO43633 222 aa25.97■■□□□ 1.75
SDF4-202ENST00000360001 RPN1P04843 607 aaKnown RBP25.97■■□□□ 1.75
SDF4-202ENST00000360001 SV2BQ7L1I2 683 aa25.97■■□□□ 1.75
SDF4-202ENST00000360001 FAM133AQ8N9E0 248 aa25.97■■□□□ 1.75
SDF4-202ENST00000360001 SHCBP1Q8NEM2 672 aa25.97■■□□□ 1.75
SDF4-202ENST00000360001 GPRASP2Q96D09 838 aa25.97■■□□□ 1.75
SDF4-202ENST00000360001 C7orf25Q9BPX7 421 aa25.97■■□□□ 1.75
SDF4-202ENST00000360001 POLR3CQ9BUI4 534 aaPredicted RBP25.97■■□□□ 1.75
SDF4-202ENST00000360001 PKD2L1Q9P0L9 805 aa25.97■■□□□ 1.75
SDF4-202ENST00000360001 RGS20O76081 388 aa25.96■■□□□ 1.75
SDF4-202ENST00000360001 RGMBQ6NW40 437 aa25.96■■□□□ 1.75
SDF4-202ENST00000360001 GPRC5AQ8NFJ5 357 aa25.96■■□□□ 1.75
SDF4-202ENST00000360001 POTEFA5A3E0 1075 aa25.96■■□□□ 1.75
SDF4-202ENST00000360001 KLRC4O43908 158 aa25.96■■□□□ 1.75
SDF4-202ENST00000360001 ALDH5A1P51649 535 aaPredicted RBP25.96■■□□□ 1.75
SDF4-202ENST00000360001 AMPD3Q01432 767 aa25.96■■□□□ 1.75
SDF4-202ENST00000360001 DHX8Q14562 1220 aaKnown RBP25.96■■□□□ 1.75
SDF4-202ENST00000360001 POTEGQ6S5H5 508 aa25.96■■□□□ 1.75
SDF4-202ENST00000360001 MLKLQ8NB16 471 aa25.96■■□□□ 1.75
SDF4-202ENST00000360001 HSD17B14Q9BPX1 270 aa25.96■■□□□ 1.75
SDF4-202ENST00000360001 PORCNQ9H237 461 aa25.96■■□□□ 1.75
SDF4-202ENST00000360001 KIAA1217Q5T5P2 1943 aa25.95■■□□□ 1.75
SDF4-202ENST00000360001 SOWAHBA6NEL2 793 aa25.95■■□□□ 1.75
SDF4-202ENST00000360001 STAM2O75886 525 aa25.95■■□□□ 1.75
SDF4-202ENST00000360001 GCLCP48506 637 aaPredicted RBP25.95■■□□□ 1.75
SDF4-202ENST00000360001 SEMA3FQ13275 785 aa25.95■■□□□ 1.75
SDF4-202ENST00000360001 NLRX1Q86UT6 975 aa25.95■■□□□ 1.75
SDF4-202ENST00000360001 AOPEPQ8N6M6 819 aa25.95■■□□□ 1.75
SDF4-202ENST00000360001 ANKRD13CQ8N6S4 541 aa25.95■■□□□ 1.75
SDF4-202ENST00000360001 E9PMD0 336 aa25.95■■□□□ 1.74
SDF4-202ENST00000360001 ATP9AO75110 1047 aa25.95■■□□□ 1.74
SDF4-202ENST00000360001 CYP4A11Q02928 519 aa25.95■■□□□ 1.74
SDF4-202ENST00000360001 FSTL1Q12841 308 aa25.95■■□□□ 1.74
SDF4-202ENST00000360001 PARK7Q99497 189 aaKnown RBP25.95■■□□□ 1.74
SDF4-202ENST00000360001 TBC1D22BQ9NU19 505 aa25.95■■□□□ 1.74
SDF4-202ENST00000360001 RMND1Q9NWS8 449 aa25.95■■□□□ 1.74
SDF4-202ENST00000360001 RGL1Q9NZL6 768 aa25.95■■□□□ 1.74
SDF4-202ENST00000360001 MORF4L1Q9UBU8 362 aa25.95■■□□□ 1.74
SDF4-202ENST00000360001 MYMKA6NI61 221 aa25.94■■□□□ 1.74
SDF4-202ENST00000360001 MMP19Q99542 508 aa25.94■■□□□ 1.74
SDF4-202ENST00000360001 EFCC1Q9HA90 598 aa25.94■■□□□ 1.74
SDF4-202ENST00000360001 DNAJC25-GNG10A0A024R161 153 aa25.93■■□□□ 1.74
SDF4-202ENST00000360001 DDX39AO00148 427 aaKnown RBP25.93■■□□□ 1.74
SDF4-202ENST00000360001 MAFGO15525 162 aa25.93■■□□□ 1.74
SDF4-202ENST00000360001 EDNRBP24530 442 aa25.93■■□□□ 1.74
SDF4-202ENST00000360001 KCNB1Q14721 858 aa25.93■■□□□ 1.74
SDF4-202ENST00000360001 TUFT1Q9NNX1 390 aa25.93■■□□□ 1.74
SDF4-202ENST00000360001 ADD3Q9UEY8 706 aaKnown RBP25.93■■□□□ 1.74
SDF4-202ENST00000360001 TLL2Q9Y6L7 1015 aa25.93■■□□□ 1.74
SDF4-202ENST00000360001 BECN2A8MW95 431 aa25.93■■□□□ 1.74
SDF4-202ENST00000360001 SLITRK3O94933 977 aa25.93■■□□□ 1.74
SDF4-202ENST00000360001 KCTD2Q14681 263 aa25.93■■□□□ 1.74
SDF4-202ENST00000360001 EPHA7Q15375 998 aa25.93■■□□□ 1.74
SDF4-202ENST00000360001 STXBP2Q15833 593 aa25.93■■□□□ 1.74
SDF4-202ENST00000360001 SMC1BQ8NDV3 1235 aa25.93■■□□□ 1.74
SDF4-202ENST00000360001 DYDC2Q96IM9 177 aa25.93■■□□□ 1.74
SDF4-202ENST00000360001 ZNFX1Q9P2E3 1918 aaKnown RBP25.92■■□□□ 1.74
SDF4-202ENST00000360001 MANSC4A6NHS7 340 aaPredicted RBP25.92■■□□□ 1.74
SDF4-202ENST00000360001 PGK2P07205 417 aa25.92■■□□□ 1.74
SDF4-202ENST00000360001 SLC10A3P09131 477 aa25.92■■□□□ 1.74
SDF4-202ENST00000360001 PLA2G4BP0C869 781 aa25.92■■□□□ 1.74
SDF4-202ENST00000360001 PSMC6P62333 389 aa25.92■■□□□ 1.74
SDF4-202ENST00000360001 CCNA1P78396 465 aa25.92■■□□□ 1.74
SDF4-202ENST00000360001 KMT5BQ4FZB7 885 aa25.92■■□□□ 1.74
SDF4-202ENST00000360001 CNNM4Q6P4Q7 775 aa25.92■■□□□ 1.74
SDF4-202ENST00000360001 ANP32BQ92688 251 aaKnown RBP25.92■■□□□ 1.74
SDF4-202ENST00000360001 FGD4Q96M96 766 aa25.92■■□□□ 1.74
SDF4-202ENST00000360001 DACH1Q9UI36 760 aa25.92■■□□□ 1.74
SDF4-202ENST00000360001 GOLGA6L19H0YKK7 550 aa25.91■■□□□ 1.74
SDF4-202ENST00000360001 AP5Z1O43299 807 aa25.91■■□□□ 1.74
SDF4-202ENST00000360001 EIF3JO75822 258 aaKnown RBP25.91■■□□□ 1.74
SDF4-202ENST00000360001 FCER1AP12319 257 aa25.91■■□□□ 1.74
SDF4-202ENST00000360001 ASIC1P78348 528 aa25.91■■□□□ 1.74
SDF4-202ENST00000360001 CTTNQ14247 550 aaKnown RBP25.91■■□□□ 1.74
SDF4-202ENST00000360001 WDR78Q5VTH9 848 aa25.91■■□□□ 1.74
SDF4-202ENST00000360001 LRRC27Q9C0I9 530 aa25.91■■□□□ 1.74
SDF4-202ENST00000360001 LRRC37A2A6NM11 1700 aa25.91■■□□□ 1.74
SDF4-202ENST00000360001 RHOBTB3O94955 611 aa25.91■■□□□ 1.74
SDF4-202ENST00000360001 CD44P16070 742 aaKnown RBP25.91■■□□□ 1.74
SDF4-202ENST00000360001 NCAPHQ15003 741 aa25.91■■□□□ 1.74
SDF4-202ENST00000360001 ZNF658Q5TYW1 1059 aaPredicted RBP25.91■■□□□ 1.74
SDF4-202ENST00000360001 SMYD4Q8IYR2 804 aaPredicted RBP25.91■■□□□ 1.74
SDF4-202ENST00000360001 KCTD17Q8N5Z5 321 aa25.91■■□□□ 1.74
SDF4-202ENST00000360001 CDHR1Q96JP9 859 aa25.91■■□□□ 1.74
SDF4-202ENST00000360001 DNM3Q9UQ16 869 aa25.91■■□□□ 1.74
SDF4-202ENST00000360001 SPATA31C2B4DYI2 1134 aa25.9■■□□□ 1.74
SDF4-202ENST00000360001 IGF2BP3O00425 579 aaKnown RBP eCLIP25.9■■□□□ 1.74
SDF4-202ENST00000360001 IKBKBO14920 756 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms