RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 ATP9AO75110 1047 aa23.11■■□□□ 1.29
HCFC1R1-202ENST00000354679 KCNA2P16389 499 aa23.11■■□□□ 1.29
HCFC1R1-202ENST00000354679 GNA11P29992 359 aa23.11■■□□□ 1.29
HCFC1R1-202ENST00000354679 SREBF1P36956 1147 aa23.11■■□□□ 1.29
HCFC1R1-202ENST00000354679 CCL23P55773 120 aa23.11■■□□□ 1.29
HCFC1R1-202ENST00000354679 PTGISQ16647 500 aa23.11■■□□□ 1.29
HCFC1R1-202ENST00000354679 GDF6Q6KF10 455 aaPredicted RBP23.11■■□□□ 1.29
HCFC1R1-202ENST00000354679 CPLX2Q6PUV4 134 aaKnown RBP23.11■■□□□ 1.29
HCFC1R1-202ENST00000354679 GPR20Q99678 358 aa23.11■■□□□ 1.29
HCFC1R1-202ENST00000354679 MXRA8Q9BRK3 442 aa23.11■■□□□ 1.29
HCFC1R1-202ENST00000354679 C16orf70Q9BSU1 422 aa23.11■■□□□ 1.29
HCFC1R1-202ENST00000354679 WNT8AQ9H1J5 351 aa23.11■■□□□ 1.29
HCFC1R1-202ENST00000354679 HDAC6Q9UBN7 1215 aa23.11■■□□□ 1.29
HCFC1R1-202ENST00000354679 GTF2IRD1Q9UHL9 959 aa23.11■■□□□ 1.29
HCFC1R1-202ENST00000354679 DOCK5Q9H7D0 1870 aa23.11■■□□□ 1.29
HCFC1R1-202ENST00000354679 ADAMTS3O15072 1205 aa23.1■■□□□ 1.29
HCFC1R1-202ENST00000354679 MAFGO15525 162 aa23.1■■□□□ 1.29
HCFC1R1-202ENST00000354679 LGALS2P05162 132 aa23.1■■□□□ 1.29
HCFC1R1-202ENST00000354679 SP4Q02446 784 aa23.1■■□□□ 1.29
HCFC1R1-202ENST00000354679 ANKRD1Q15327 319 aa23.1■■□□□ 1.29
HCFC1R1-202ENST00000354679 REXO1Q8N1G1 1221 aaKnown RBP23.1■■□□□ 1.29
HCFC1R1-202ENST00000354679 RNPC3Q96LT9 517 aaKnown RBP23.1■■□□□ 1.29
HCFC1R1-202ENST00000354679 PKD2L1Q9P0L9 805 aa23.1■■□□□ 1.29
HCFC1R1-202ENST00000354679 VPS54Q9P1Q0 977 aa23.1■■□□□ 1.29
HCFC1R1-202ENST00000354679 TPCN1Q9ULQ1 816 aa23.1■■□□□ 1.29
HCFC1R1-202ENST00000354679 DEXIO95424 95 aa23.09■■□□□ 1.29
HCFC1R1-202ENST00000354679 ACRP10323 421 aa23.09■■□□□ 1.29
HCFC1R1-202ENST00000354679 AK2P54819 239 aa23.09■■□□□ 1.29
HCFC1R1-202ENST00000354679 ARHGAP4P98171 946 aa23.09■■□□□ 1.29
HCFC1R1-202ENST00000354679 CEP55Q53EZ4 464 aa23.09■■□□□ 1.29
HCFC1R1-202ENST00000354679 MCTP2Q6DN12 878 aa23.09■■□□□ 1.29
HCFC1R1-202ENST00000354679 C16orf59Q7L2K0 433 aa23.09■■□□□ 1.29
HCFC1R1-202ENST00000354679 CYP2W1Q8TAV3 490 aa23.09■■□□□ 1.29
HCFC1R1-202ENST00000354679 BICD2Q8TD16 824 aa23.09■■□□□ 1.29
HCFC1R1-202ENST00000354679 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.09■■□□□ 1.292e-8■■■□□ 17
HCFC1R1-202ENST00000354679 SLKQ9H2G2 1235 aaPredicted RBP23.09■■□□□ 1.29
HCFC1R1-202ENST00000354679 IL23AQ9NPF7 189 aa23.09■■□□□ 1.29
HCFC1R1-202ENST00000354679 SH3GLB2Q9NR46 395 aa23.09■■□□□ 1.29
HCFC1R1-202ENST00000354679 TELO2Q9Y4R8 837 aa23.09■■□□□ 1.29
HCFC1R1-202ENST00000354679 H3BRB1 525 aa23.08■■□□□ 1.29
HCFC1R1-202ENST00000354679 PFKFB2O60825 505 aa23.08■■□□□ 1.29
HCFC1R1-202ENST00000354679 SCRN1Q12765 414 aa23.08■■□□□ 1.29
HCFC1R1-202ENST00000354679 C8orf34Q49A92 452 aa23.08■■□□□ 1.29
HCFC1R1-202ENST00000354679 TMEM240Q5SV17 173 aa23.08■■□□□ 1.29
HCFC1R1-202ENST00000354679 GPR153Q6NV75 609 aa23.08■■□□□ 1.29
HCFC1R1-202ENST00000354679 PSRC1Q6PGN9 363 aaPredicted RBP23.08■■□□□ 1.29
HCFC1R1-202ENST00000354679 SCLYQ96I15 445 aa23.08■■□□□ 1.29
HCFC1R1-202ENST00000354679 CTAGE1Q96RT6 745 aa23.08■■□□□ 1.29
HCFC1R1-202ENST00000354679 TUT1Q9H6E5 874 aaKnown RBP23.08■■□□□ 1.29
HCFC1R1-202ENST00000354679 KCNH7Q9NS40 1196 aa23.08■■□□□ 1.29
HCFC1R1-202ENST00000354679 PITPNM1O00562 1244 aa23.07■■□□□ 1.28
HCFC1R1-202ENST00000354679 CDKL5O76039 1030 aa23.07■■□□□ 1.28
HCFC1R1-202ENST00000354679 ZNF76P36508 570 aa23.07■■□□□ 1.28
HCFC1R1-202ENST00000354679 BFSP2Q13515 415 aa23.07■■□□□ 1.28
HCFC1R1-202ENST00000354679 UTP14CQ5TAP6 766 aaKnown RBP23.07■■□□□ 1.28
HCFC1R1-202ENST00000354679 RASGRP4Q8TDF6 673 aa23.07■■□□□ 1.28
HCFC1R1-202ENST00000354679 NLRP5P59047 1200 aa23.06■■□□□ 1.28
HCFC1R1-202ENST00000354679 ZNF365Q70YC5 407 aa23.06■■□□□ 1.28
HCFC1R1-202ENST00000354679 TRIM50Q86XT4 487 aa23.06■■□□□ 1.28
HCFC1R1-202ENST00000354679 CCDC155Q8N6L0 562 aa23.06■■□□□ 1.28
HCFC1R1-202ENST00000354679 RETREG2Q8NC44 543 aa23.06■■□□□ 1.28
HCFC1R1-202ENST00000354679 CRYGNQ8WXF5 182 aa23.06■■□□□ 1.28
HCFC1R1-202ENST00000354679 ZNF215Q9UL58 517 aaPredicted RBP23.06■■□□□ 1.28
HCFC1R1-202ENST00000354679 MEIS1O00470 390 aa23.05■■□□□ 1.28
HCFC1R1-202ENST00000354679 CYP3A4P08684 503 aa23.05■■□□□ 1.28
HCFC1R1-202ENST00000354679 ARP10275 920 aa23.05■■□□□ 1.28
HCFC1R1-202ENST00000354679 TCF7P36402 384 aaPredicted RBP23.05■■□□□ 1.28
HCFC1R1-202ENST00000354679 NEK4P51957 841 aa23.05■■□□□ 1.28
HCFC1R1-202ENST00000354679 NIPA1Q7RTP0 329 aa23.05■■□□□ 1.28
HCFC1R1-202ENST00000354679 RPUSD2Q8IZ73 545 aaKnown RBP23.05■■□□□ 1.28
HCFC1R1-202ENST00000354679 CAGE1Q8TC20 777 aa23.05■■□□□ 1.28
HCFC1R1-202ENST00000354679 SEPT1Q8WYJ6 367 aa23.05■■□□□ 1.28
HCFC1R1-202ENST00000354679 JPH1Q9HDC5 661 aaPredicted RBP23.05■■□□□ 1.28
HCFC1R1-202ENST00000354679 SMIM10L2AP0DMW4 78 aa23.04■■□□□ 1.28
HCFC1R1-202ENST00000354679 SMIM10L2BP0DMW5 78 aa23.04■■□□□ 1.28
HCFC1R1-202ENST00000354679 DHX38Q92620 1227 aaKnown RBP23.04■■□□□ 1.28
HCFC1R1-202ENST00000354679 SDF4Q9BRK5 362 aa23.04■■□□□ 1.28
HCFC1R1-202ENST00000354679 AGO4Q9HCK5 861 aaKnown RBP23.04■■□□□ 1.28
HCFC1R1-202ENST00000354679 NFASCO94856 1347 aa23.04■■□□□ 1.28
HCFC1R1-202ENST00000354679 GSTTP1A0A1W2PQM5 241 aa23.03■■□□□ 1.28
HCFC1R1-202ENST00000354679 C17orf102A2RUQ5 167 aa23.03■■□□□ 1.28
HCFC1R1-202ENST00000354679 FAM86B1E9PN63 330 aa23.03■■□□□ 1.28
HCFC1R1-202ENST00000354679 FGBP02675 491 aa23.03■■□□□ 1.28
HCFC1R1-202ENST00000354679 FAM86B2P0C5J1 330 aa23.03■■□□□ 1.28
HCFC1R1-202ENST00000354679 ZNF200P98182 395 aaPredicted RBP23.03■■□□□ 1.28
HCFC1R1-202ENST00000354679 PTK7Q13308 1070 aa23.03■■□□□ 1.28
HCFC1R1-202ENST00000354679 HIC1Q14526 733 aa23.03■■□□□ 1.28
HCFC1R1-202ENST00000354679 PLA2G4DQ86XP0 818 aa23.03■■□□□ 1.28
HCFC1R1-202ENST00000354679 FAM177A1Q8N128 213 aaPredicted RBP23.03■■□□□ 1.28
HCFC1R1-202ENST00000354679 AFAP1L1Q8TED9 768 aa23.03■■□□□ 1.28
HCFC1R1-202ENST00000354679 AIFM3Q96NN9 605 aa23.03■■□□□ 1.28
HCFC1R1-202ENST00000354679 SLC9A2Q9UBY0 812 aa23.03■■□□□ 1.28
HCFC1R1-202ENST00000354679 PCDHA4Q9UN74 947 aa23.03■■□□□ 1.28
HCFC1R1-202ENST00000354679 STK36Q9NRP7 1315 aa23.03■■□□□ 1.28
HCFC1R1-202ENST00000354679 IQCF3P0C7M6 154 aa23.02■■□□□ 1.28
HCFC1R1-202ENST00000354679 RFC2P35250 354 aa23.02■■□□□ 1.28
HCFC1R1-202ENST00000354679 SMAD3P84022 425 aaKnown RBP23.02■■□□□ 1.28
HCFC1R1-202ENST00000354679 RBL2Q08999 1139 aa23.02■■□□□ 1.28
HCFC1R1-202ENST00000354679 ITGB3BPQ13352 177 aaPredicted RBP23.02■■□□□ 1.28
HCFC1R1-202ENST00000354679 ME3Q16798 604 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms