RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 SPRED3Q2MJR0 410 aa18.83■□□□□ 0.61
PRKCD-201ENST00000330452 CNGA4Q8IV77 575 aa18.83■□□□□ 0.61
PRKCD-201ENST00000330452 SBF2Q86WG5 1849 aa18.83■□□□□ 0.61
PRKCD-201ENST00000330452 KCNJ18B7U540 433 aa18.83■□□□□ 0.6
PRKCD-201ENST00000330452 DNM1LO00429 736 aa18.83■□□□□ 0.6
PRKCD-201ENST00000330452 UFL1O94874 794 aa18.83■□□□□ 0.6
PRKCD-201ENST00000330452 KCNJ12Q14500 433 aa18.83■□□□□ 0.6
PRKCD-201ENST00000330452 WHAMMP3Q1A5X7 153 aa18.83■□□□□ 0.6
PRKCD-201ENST00000330452 TCP11X2Q5H9J9 407 aa18.83■□□□□ 0.6
PRKCD-201ENST00000330452 ZNF569Q5MCW4 686 aa18.83■□□□□ 0.6
PRKCD-201ENST00000330452 ARL6IP4Q66PJ3 421 aaKnown RBP18.83■□□□□ 0.6
PRKCD-201ENST00000330452 RASGRP2Q7LDG7 609 aa18.83■□□□□ 0.6
PRKCD-201ENST00000330452 MKNK2Q9HBH9 465 aa18.83■□□□□ 0.6
PRKCD-201ENST00000330452 SUN2Q9UH99 717 aa18.83■□□□□ 0.6
PRKCD-201ENST00000330452 LRRC10BA6NIK2 292 aa18.82■□□□□ 0.6
PRKCD-201ENST00000330452 GOLGA8KD6RF30 607 aa18.82■□□□□ 0.6
PRKCD-201ENST00000330452 F8W031 263 aaPredicted RBP18.82■□□□□ 0.6
PRKCD-201ENST00000330452 LONP1P36776 959 aaKnown RBP18.82■□□□□ 0.6
PRKCD-201ENST00000330452 INF2Q27J81 1249 aa18.82■□□□□ 0.6
PRKCD-201ENST00000330452 CCDC121Q6ZUS5 278 aa18.82■□□□□ 0.6
PRKCD-201ENST00000330452 CCDC148Q8NFR7 591 aa18.82■□□□□ 0.6
PRKCD-201ENST00000330452 CUL5Q93034 780 aa18.82■□□□□ 0.6
PRKCD-201ENST00000330452 NUP88Q99567 741 aaPredicted RBP18.82■□□□□ 0.6
PRKCD-201ENST00000330452 MXD3Q9BW11 206 aa18.82■□□□□ 0.6
PRKCD-201ENST00000330452 PHACTR1Q9C0D0 580 aa18.82■□□□□ 0.6
PRKCD-201ENST00000330452 EPN3Q9H201 632 aa18.82■□□□□ 0.6
PRKCD-201ENST00000330452 MAD2L2Q9UI95 211 aa18.82■□□□□ 0.6
PRKCD-201ENST00000330452 TAF1LQ8IZX4 1826 aa18.82■□□□□ 0.6
PRKCD-201ENST00000330452 CCDC194A0A1B0GVG4 234 aa18.82■□□□□ 0.6
PRKCD-201ENST00000330452 CYTH3O43739 400 aa18.82■□□□□ 0.6
PRKCD-201ENST00000330452 ANP32DO95626 131 aa18.82■□□□□ 0.6
PRKCD-201ENST00000330452 APBA3O96018 575 aa18.82■□□□□ 0.6
PRKCD-201ENST00000330452 ATP4AP20648 1035 aa18.82■□□□□ 0.6
PRKCD-201ENST00000330452 GRAPQ13588 217 aa18.82■□□□□ 0.6
PRKCD-201ENST00000330452 SLMAPQ14BN4 828 aa18.82■□□□□ 0.6
PRKCD-201ENST00000330452 NAALADL2Q58DX5 795 aa18.82■□□□□ 0.6
PRKCD-201ENST00000330452 DGKHQ86XP1 1220 aa18.82■□□□□ 0.6
PRKCD-201ENST00000330452 GRAPLQ8TC17 118 aaPredicted RBP18.82■□□□□ 0.6
PRKCD-201ENST00000330452 CPVLQ9H3G5 476 aa18.82■□□□□ 0.6
PRKCD-201ENST00000330452 ITIH6Q6UXX5 1313 aa18.81■□□□□ 0.6
PRKCD-201ENST00000330452 KIF5CO60282 957 aa18.81■□□□□ 0.6
PRKCD-201ENST00000330452 GOLGA8HP0CJ92 632 aa18.81■□□□□ 0.6
PRKCD-201ENST00000330452 USP14P54578 494 aa18.81■□□□□ 0.6
PRKCD-201ENST00000330452 TMEM62Q0P6H9 643 aa18.81■□□□□ 0.6
PRKCD-201ENST00000330452 XRCC4Q13426 336 aa18.81■□□□□ 0.6
PRKCD-201ENST00000330452 HEATR3Q7Z4Q2 680 aa18.81■□□□□ 0.6
PRKCD-201ENST00000330452 SELENOOQ9BVL4 669 aa18.81■□□□□ 0.6
PRKCD-201ENST00000330452 DISC1Q9NRI5 854 aa18.81■□□□□ 0.6
PRKCD-201ENST00000330452 ABHD10Q9NUJ1 306 aa18.81■□□□□ 0.6
PRKCD-201ENST00000330452 SAP30BPQ9UHR5 308 aaKnown RBP18.81■□□□□ 0.6
PRKCD-201ENST00000330452 PCDHA6Q9UN73 950 aa18.81■□□□□ 0.6
PRKCD-201ENST00000330452 PCDHA8Q9Y5H6 950 aa18.81■□□□□ 0.6
PRKCD-201ENST00000330452 KIAA1551Q9HCM1 1747 aa18.81■□□□□ 0.6
PRKCD-201ENST00000330452 CTAGE9A4FU28 777 aa18.81■□□□□ 0.6
PRKCD-201ENST00000330452 SMIM24O75264 130 aa18.81■□□□□ 0.6
PRKCD-201ENST00000330452 PMS1P54277 932 aaKnown RBP18.81■□□□□ 0.6
PRKCD-201ENST00000330452 HDLBPQ00341 1268 aaKnown RBP18.81■□□□□ 0.6
PRKCD-201ENST00000330452 CUL3Q13618 768 aa18.81■□□□□ 0.6
PRKCD-201ENST00000330452 CCDC170Q8IYT3 715 aa18.81■□□□□ 0.6
PRKCD-201ENST00000330452 PYM1Q9BRP8 204 aaKnown RBP18.81■□□□□ 0.6
PRKCD-201ENST00000330452 STX8Q9UNK0 236 aa18.81■□□□□ 0.6
PRKCD-201ENST00000330452 IRS2Q9Y4H2 1338 aa18.8■□□□□ 0.6
PRKCD-201ENST00000330452 C6orf229H3BNL8 230 aa18.8■□□□□ 0.6
PRKCD-201ENST00000330452 M0R2N6 131 aa18.8■□□□□ 0.6
PRKCD-201ENST00000330452 LDHBP07195 334 aaKnown RBP18.8■□□□□ 0.6
PRKCD-201ENST00000330452 MCM3P25205 808 aa18.8■□□□□ 0.6
PRKCD-201ENST00000330452 LSP1P33241 339 aa18.8■□□□□ 0.6
PRKCD-201ENST00000330452 GRM4Q14833 912 aa18.8■□□□□ 0.6
PRKCD-201ENST00000330452 DTHD1Q6ZMT9 781 aa18.8■□□□□ 0.6
PRKCD-201ENST00000330452 TGFBRAP1Q8WUH2 860 aa18.8■□□□□ 0.6
PRKCD-201ENST00000330452 LAMB1P07942 1786 aa18.8■□□□□ 0.6
PRKCD-201ENST00000330452 TSPY3P0CV98 308 aa18.8■□□□□ 0.6
PRKCD-201ENST00000330452 TSPY8P0CW00 308 aa18.8■□□□□ 0.6
PRKCD-201ENST00000330452 SFSWAPQ12872 951 aaKnown RBP18.8■□□□□ 0.6
PRKCD-201ENST00000330452 PPP1R15BQ5SWA1 713 aa18.8■□□□□ 0.6
PRKCD-201ENST00000330452 SPTY2D1Q68D10 685 aaPredicted RBP18.8■□□□□ 0.6
PRKCD-201ENST00000330452 IRF2BP1Q8IU81 584 aa18.8■□□□□ 0.6
PRKCD-201ENST00000330452 SLC35F6Q8N357 371 aa18.8■□□□□ 0.6
PRKCD-201ENST00000330452 OSBPL7Q9BZF2 842 aa18.8■□□□□ 0.6
PRKCD-201ENST00000330452 RMND1Q9NWS8 449 aa18.8■□□□□ 0.6
PRKCD-201ENST00000330452 BAIAP2L1Q9UHR4 511 aa18.8■□□□□ 0.6
PRKCD-201ENST00000330452 MYBL1P10243 752 aa18.79■□□□□ 0.6
PRKCD-201ENST00000330452 CTCFP49711 727 aaPredicted RBP18.79■□□□□ 0.6
PRKCD-201ENST00000330452 UBXN1Q04323 297 aa18.79■□□□□ 0.6
PRKCD-201ENST00000330452 GSPT2Q8IYD1 628 aaKnown RBP18.79■□□□□ 0.6
PRKCD-201ENST00000330452 LRRC15Q8TF66 581 aa18.79■□□□□ 0.6
PRKCD-201ENST00000330452 CCDC51Q96ER9 411 aa18.79■□□□□ 0.6
PRKCD-201ENST00000330452 SH3GLB2Q9NR46 395 aa18.79■□□□□ 0.6
PRKCD-201ENST00000330452 MYH8P13535 1937 aa18.79■□□□□ 0.6
PRKCD-201ENST00000330452 FECHP22830 423 aa18.79■□□□□ 0.6
PRKCD-201ENST00000330452 KRT9P35527 623 aa18.79■□□□□ 0.6
PRKCD-201ENST00000330452 SPAG1Q07617 926 aa18.79■□□□□ 0.6
PRKCD-201ENST00000330452 MYBPC3Q14896 1274 aa18.79■□□□□ 0.6
PRKCD-201ENST00000330452 ANKRD20A8PQ5CZ79 823 aa18.79■□□□□ 0.6
PRKCD-201ENST00000330452 MAPKAPK5Q8IW41 473 aa18.79■□□□□ 0.6
PRKCD-201ENST00000330452 ZFATQ9P243 1243 aa18.79■□□□□ 0.6
PRKCD-201ENST00000330452 POLLQ9UGP5 575 aa18.79■□□□□ 0.6
PRKCD-201ENST00000330452 PARP1P09874 1014 aaKnown RBP18.78■□□□□ 0.6
PRKCD-201ENST00000330452 SLURP2P0DP57 97 aa18.78■□□□□ 0.6
PRKCD-201ENST00000330452 COL23A1Q86Y22 540 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms