RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 FRMD3A2A2Y4 597 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 STX17P56962 302 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 ACTN3Q08043 901 aaPredicted RBP11.44□□□□□ -0.58
ABCF1-201ENST00000326195 TSR1Q2NL82 804 aaKnown RBP11.44□□□□□ -0.58
ABCF1-201ENST00000326195 QRICH1Q2TAL8 776 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 ACRBPQ8NEB7 543 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 GJA10Q969M2 543 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 HOOK2Q96ED9 719 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 AS3MTQ9HBK9 375 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 PRR12Q9ULL5 1215 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 NFE2L3Q9Y4A8 694 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 MYH1P12882 1939 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 CTAGE15A4D2H0 777 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 POTEB2H3BUK9 544 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 NEBLO76041 1014 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 CTAGE8P0CG41 777 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 POSTNQ15063 836 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 LONRF3Q496Y0 759 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 TYW1BQ6NUM6 668 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 CTAGE6Q86UF2 777 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 CTAGE4Q8IX94 777 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 ANKRD13CQ8N6S4 541 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 GIMAP7Q8NHV1 300 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 JMJD4Q9H9V9 463 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 SERTAD1Q9UHV2 236 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 PPP1R12AO14974 1030 aaPredicted RBP11.44□□□□□ -0.58
ABCF1-201ENST00000326195 MARCH6O60337 910 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 PIK3AP1Q6ZUJ8 805 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 CABS1Q96KC9 395 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 P2RX7Q99572 595 aaKnown RBP11.44□□□□□ -0.58
ABCF1-201ENST00000326195 SAMSN1Q9NSI8 373 aaKnown RBP11.44□□□□□ -0.58
ABCF1-201ENST00000326195 NYAP2Q9P242 653 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 CPA4Q9UI42 421 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 CCPG1Q9ULG6 757 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 TMX2Q9Y320 296 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 DLEC1Q9Y238 1755 aa11.44□□□□□ -0.58
ABCF1-201ENST00000326195 KIF5CO60282 957 aa11.43□□□□□ -0.58
ABCF1-201ENST00000326195 TOMM70O94826 608 aa11.43□□□□□ -0.58
ABCF1-201ENST00000326195 FGRP09769 529 aa11.43□□□□□ -0.58
ABCF1-201ENST00000326195 PCP11498 1178 aaKnown RBP11.43□□□□□ -0.58
ABCF1-201ENST00000326195 SYDE2Q5VT97 1194 aa11.43□□□□□ -0.58
ABCF1-201ENST00000326195 ERO1BQ86YB8 467 aa11.43□□□□□ -0.58
ABCF1-201ENST00000326195 HDAC6Q9UBN7 1215 aa11.43□□□□□ -0.58
ABCF1-201ENST00000326195 WDR19Q8NEZ3 1342 aa11.43□□□□□ -0.58
ABCF1-201ENST00000326195 CTAGE9A4FU28 777 aa11.43□□□□□ -0.58
ABCF1-201ENST00000326195 SMCO2A6NFE2 343 aa11.43□□□□□ -0.58
ABCF1-201ENST00000326195 IFNAR1P17181 557 aa11.43□□□□□ -0.58
ABCF1-201ENST00000326195 BIRC2Q13490 618 aa11.43□□□□□ -0.58
ABCF1-201ENST00000326195 METTL16Q86W50 562 aaKnown RBP11.43□□□□□ -0.58
ABCF1-201ENST00000326195 SMC1BQ8NDV3 1235 aa11.43□□□□□ -0.58
ABCF1-201ENST00000326195 ATRNL1Q5VV63 1379 aa11.43□□□□□ -0.58
ABCF1-201ENST00000326195 SRGAP2O75044 1071 aa11.43□□□□□ -0.58
ABCF1-201ENST00000326195 SKAP2O75563 359 aaPredicted RBP11.43□□□□□ -0.58
ABCF1-201ENST00000326195 RBL2Q08999 1139 aa11.43□□□□□ -0.58
ABCF1-201ENST00000326195 STIM1Q13586 685 aa11.43□□□□□ -0.58
ABCF1-201ENST00000326195 GRM4Q14833 912 aa11.43□□□□□ -0.58
ABCF1-201ENST00000326195 WDR93Q6P2C0 686 aa11.43□□□□□ -0.58
ABCF1-201ENST00000326195 SHC4Q6S5L8 630 aa11.43□□□□□ -0.58
ABCF1-201ENST00000326195 TRIM10Q9UDY6 481 aa11.43□□□□□ -0.58
ABCF1-201ENST00000326195 ENC1O14682 589 aa11.42□□□□□ -0.58
ABCF1-201ENST00000326195 TRPA1O75762 1119 aa11.42□□□□□ -0.58
ABCF1-201ENST00000326195 FMNL1O95466 1100 aaPredicted RBP11.42□□□□□ -0.58
ABCF1-201ENST00000326195 CALM1P0DP23 149 aa11.42□□□□□ -0.58
ABCF1-201ENST00000326195 CALM2P0DP24 149 aa11.42□□□□□ -0.58
ABCF1-201ENST00000326195 CALM3P0DP25 149 aa11.42□□□□□ -0.58
ABCF1-201ENST00000326195 KRT2P35908 639 aa11.42□□□□□ -0.58
ABCF1-201ENST00000326195 GNGT1P63211 74 aa11.42□□□□□ -0.58
ABCF1-201ENST00000326195 NTRK3Q16288 839 aa11.42□□□□□ -0.58
ABCF1-201ENST00000326195 SH2D4AQ9H788 454 aa11.42□□□□□ -0.58
ABCF1-201ENST00000326195 DDAH1O94760 285 aa11.42□□□□□ -0.58
ABCF1-201ENST00000326195 SCG2P13521 617 aa11.42□□□□□ -0.58
ABCF1-201ENST00000326195 ZNF174Q15697 407 aa11.42□□□□□ -0.58
ABCF1-201ENST00000326195 SNRNP48Q6IEG0 339 aaKnown RBP11.42□□□□□ -0.58
ABCF1-201ENST00000326195 FAM76AQ8TAV0 307 aa11.42□□□□□ -0.58
ABCF1-201ENST00000326195 COG1Q8WTW3 980 aa11.42□□□□□ -0.58
ABCF1-201ENST00000326195 PCMTD1Q96MG8 357 aaPredicted RBP11.42□□□□□ -0.58
ABCF1-201ENST00000326195 FAM107BQ9H098 131 aa11.42□□□□□ -0.58
ABCF1-201ENST00000326195 TFR2Q9UP52 801 aa11.42□□□□□ -0.58
ABCF1-201ENST00000326195 RIPK3Q9Y572 518 aa11.42□□□□□ -0.58
ABCF1-201ENST00000326195 GOLGA6CA6NDK9 693 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 MMP1P03956 469 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 GOLGA6DP0CG33 693 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 MLKLQ8NB16 471 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 CAPS2Q9BXY5 557 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 VIPAS39Q9H9C1 493 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 A1CFQ9NQ94 594 aaKnown RBP11.41□□□□□ -0.58
ABCF1-201ENST00000326195 GOLGA6AQ9NYA3 693 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 ARFGEF1Q9Y6D6 1849 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 EIF3HO15372 352 aaKnown RBP eCLIP11.41□□□□□ -0.58
ABCF1-201ENST00000326195 MYCLP12524 364 aaPredicted RBP11.41□□□□□ -0.58
ABCF1-201ENST00000326195 USP8P40818 1118 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 NEDD9Q14511 834 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 CCDC178Q5BJE1 867 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 SAPCD2Q86UD0 394 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 FBXO11Q86XK2 927 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 GRAMD1CQ8IYS0 662 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 STAMQ92783 540 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 MMS19Q96T76 1030 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 PALM3A6NDB9 673 aaPredicted RBP11.41□□□□□ -0.58
ABCF1-201ENST00000326195 H0YHG0 523 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms