RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 BAATQ14032 418 aaPredicted RBP10.24□□□□□ -0.77
TMEM39A-201ENST00000319172 IFI16Q16666 785 aaKnown RBP10.24□□□□□ -0.77
TMEM39A-201ENST00000319172 SHROOM1Q2M3G4 852 aaPredicted RBP10.24□□□□□ -0.77
TMEM39A-201ENST00000319172 TCP11X2Q5H9J9 407 aa10.24□□□□□ -0.77
TMEM39A-201ENST00000319172 ATG4CQ96DT6 458 aa10.24□□□□□ -0.77
TMEM39A-201ENST00000319172 RHOXF2Q9BQY4 288 aa10.24□□□□□ -0.77
TMEM39A-201ENST00000319172 ATRNO75882 1429 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 HNRNPDLO14979 420 aaKnown RBP10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 ERLIN2O94905 339 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 DESP17661 470 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 LIG4P49917 911 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 PRELPP51888 382 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 NCBP1Q09161 790 aaKnown RBP10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 WDR44Q5JSH3 913 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 PDXDC2PQ6P474 469 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 LPAR1Q92633 364 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 SYNCQ9H7C4 482 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 NPHP3-ACAD11A0A0J9YXS1 232 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 ESYT2A0FGR8 921 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 MARK3P27448 753 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 CA8P35219 290 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 CETN2P41208 172 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 COASYQ13057 564 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 COG2Q14746 738 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 SPDYE2Q495Y8 402 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 CAMKK2Q96RR4 588 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 IFIH1Q9BYX4 1025 aaKnown RBP10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 RIOX1Q9H6W3 641 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 TUBE1Q9UJT0 475 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 TUBB4AP04350 444 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 CBX1P83916 185 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 NSUN6Q8TEA1 469 aaKnown RBP10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 POMGNT1Q8WZA1 660 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 CCDC51Q96ER9 411 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 IWS1Q96ST2 819 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 PSMD1Q99460 953 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 EIF2AK1Q9BQI3 630 aaKnown RBP10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 NAA15Q9BXJ9 866 aaKnown RBP10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 ANKFY1Q9P2R3 1169 aa10.23□□□□□ -0.77
TMEM39A-201ENST00000319172 LRP6O75581 1613 aa10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 CCNA1P78396 465 aa10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 SETQ01105 290 aaPredicted RBP10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 MAN2A1Q16706 1144 aa10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 PTPROQ16827 1216 aa10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 VWA3BQ502W6 1294 aa10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 SLC7A3Q8WY07 619 aa10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 CDHR1Q96JP9 859 aa10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 GBP3Q9H0R5 595 aa10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 CGNQ9P2M7 1197 aaKnown RBP10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 C5P01031 1676 aa10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 SOWAHDA6NJG2 315 aa10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 STX10O60499 249 aa10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 CTNND1O60716 968 aaKnown RBP10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 GAP43P17677 238 aa10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 DPYDQ12882 1025 aa10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 STK4Q13043 487 aa10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 ORC2Q13416 577 aaPredicted RBP10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 GBP6Q6ZN66 633 aa10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 DHX37Q8IY37 1157 aaKnown RBP10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 FAM186BQ8IYM0 893 aa10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 EPN1Q9Y6I3 576 aaPredicted RBP10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 EIF3JO75822 258 aaKnown RBP10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 NEBLO76041 1014 aa10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 PEX3P56589 373 aa10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 EXOC3L4Q17RC7 722 aa10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 SLC30A10Q6XR72 485 aa10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 NAPGQ99747 312 aaPredicted RBP10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 METTL14Q9HCE5 456 aaKnown RBP10.22□□□□□ -0.77
TMEM39A-201ENST00000319172 ETF1P62495 437 aaKnown RBP10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 PSMD2Q13200 908 aa10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 PDIA5Q14554 519 aa10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 BRDTQ58F21 947 aaPredicted RBP10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 BPIFA3Q9BQP9 254 aa10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 LXNQ9BS40 222 aa10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 NDST4Q9H3R1 872 aa10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 ACAD9Q9H845 621 aa10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 KMT5AQ9NQR1 393 aa10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 NRBP2Q9NSY0 501 aa10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 HPSEQ9Y251 543 aa10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 TMX2Q9Y320 296 aa10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 STRCQ7RTU9 1775 aa10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 PVALEFA0A1B0GWK0 134 aa10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 MYMKA6NI61 221 aa10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 KRT19P08727 400 aa10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 CKAP4Q07065 602 aaKnown RBP10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 TRPC3Q13507 836 aa10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 C9orf131Q5VYM1 1079 aa10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 PADI6Q6TGC4 694 aa10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 DAGLBQ8NCG7 672 aa10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 TTC16Q8NEE8 873 aa10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 ANKS1AQ92625 1134 aa10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 SECISBP2LQ93073 1101 aaKnown RBP10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 THAP9Q9H5L6 903 aa10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 ZHX1Q9UKY1 873 aaPredicted RBP10.21□□□□□ -0.77
TMEM39A-201ENST00000319172 VIL1P09327 827 aaKnown RBP10.21□□□□□ -0.78
TMEM39A-201ENST00000319172 PPP2R3AQ06190 1150 aa10.21□□□□□ -0.78
TMEM39A-201ENST00000319172 PPM1KQ8N3J5 372 aa10.21□□□□□ -0.78
TMEM39A-201ENST00000319172 PPP1R16BQ96T49 567 aa10.21□□□□□ -0.78
TMEM39A-201ENST00000319172 NOD1Q9Y239 953 aa10.21□□□□□ -0.78
TMEM39A-201ENST00000319172 GOLGA8IPA6NC78 632 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms