RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 USP17L17D6RBQ6 530 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 USP17L19D6RCP7 530 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 USP17L20D6RJB6 530 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 KCNK3O14649 394 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 RPS6KA4O75676 772 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 USP17L24Q0WX57 530 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 RC3H1Q5TC82 1133 aaKnown RBP14.92□□□□□ -0.02
CTTN-201ENST00000301843 USP17L6PQ6QN14 398 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 DHX37Q8IY37 1157 aaKnown RBP14.92□□□□□ -0.02
CTTN-201ENST00000301843 MYOCDQ8IZQ8 938 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 MTMR9Q96QG7 549 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 PANK4Q9NVE7 773 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 BCS1LQ9Y276 419 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 IRS2Q9Y4H2 1338 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 CCDC88AQ3V6T2 1871 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 SHTN1A0MZ66 631 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 FAM196BA6NMK8 535 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 MYO1FO00160 1098 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 RAD51CO43502 376 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 SHOX2O60902 331 aaPredicted RBP14.92□□□□□ -0.02
CTTN-201ENST00000301843 ERLIN2O94905 339 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 CFAP221Q4G0U5 840 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 HERC4Q5GLZ8 1057 aaPredicted RBP14.92□□□□□ -0.02
CTTN-201ENST00000301843 NAA35Q5VZE5 725 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 MXD3Q9BW11 206 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 CUEDC2Q9H467 287 aa14.92□□□□□ -0.02
CTTN-201ENST00000301843 SLC9A1P19634 815 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 TM4SF1P30408 202 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 TMEM266Q2M3C6 531 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 ASTE1Q2TB18 679 aaPredicted RBP14.91□□□□□ -0.02
CTTN-201ENST00000301843 SLC9C1Q4G0N8 1177 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 GJB7Q6PEY0 223 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 ZNF662Q6ZS27 426 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 CCDC84Q86UT8 332 aaPredicted RBP14.91□□□□□ -0.02
CTTN-201ENST00000301843 PPP1R11O60927 126 aaPredicted RBP14.91□□□□□ -0.02
CTTN-201ENST00000301843 EPS15P42566 896 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 ADCY7P51828 1080 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 CASP5P51878 434 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 KLHL30Q0D2K2 578 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 FIGNQ5HY92 759 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 SPTY2D1Q68D10 685 aaPredicted RBP14.91□□□□□ -0.02
CTTN-201ENST00000301843 DPP8Q6V1X1 898 aaPredicted RBP14.91□□□□□ -0.02
CTTN-201ENST00000301843 TPTE2Q6XPS3 522 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 GUF1Q8N442 669 aaKnown RBP14.91□□□□□ -0.02
CTTN-201ENST00000301843 RTFDC1Q9BY42 306 aaPredicted RBP14.91□□□□□ -0.02
CTTN-201ENST00000301843 TRIM31Q9BZY9 425 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 LRRC4CQ9HCJ2 640 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 PPANQ9NQ55 473 aaKnown RBP14.91□□□□□ -0.02
CTTN-201ENST00000301843 COL4A3BPQ9Y5P4 624 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 TMCO5BA8MYB1 307 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 KRT18P05783 430 aaKnown RBP14.91□□□□□ -0.02
CTTN-201ENST00000301843 AKR1B1P15121 316 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 HNRNPH3P31942 346 aaKnown RBP14.91□□□□□ -0.02
CTTN-201ENST00000301843 FAM26FQ5R3K3 315 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 CEP85LQ5SZL2 805 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 ICE2Q659A1 982 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 CHADLQ6NUI6 762 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 TSG101Q99816 390 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 SPZ1Q9BXG8 430 aa14.91□□□□□ -0.02
CTTN-201ENST00000301843 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.91□□□□□ -0.02
CTTN-201ENST00000301843 MPHOSPH10O00566 681 aaKnown RBP14.9□□□□□ -0.02
CTTN-201ENST00000301843 ATP2C2O75185 946 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 PDHBP11177 359 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 CDK17Q00537 523 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 DCAF17Q5H9S7 520 aaPredicted RBP14.9□□□□□ -0.02
CTTN-201ENST00000301843 RNF187Q5TA31 235 aaPredicted RBP14.9□□□□□ -0.02
CTTN-201ENST00000301843 TCERG1LQ5VWI1 586 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 DDX47Q9H0S4 455 aaKnown RBP14.9□□□□□ -0.02
CTTN-201ENST00000301843 CAPN7Q9Y6W3 813 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 SNED1Q8TER0 1413 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 CEP104O60308 925 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 OPA1O60313 960 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 COPB2P35606 906 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 GALNT17Q6IS24 598 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 EFCAB13Q8IY85 973 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 PIK3R5Q8WYR1 880 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 HAS1Q92839 578 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 DNAJC19Q96DA6 116 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 DDX25Q9UHL0 483 aaKnown RBP14.9□□□□□ -0.02
CTTN-201ENST00000301843 GRID2IPA4D2P6 1211 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 POTEFA5A3E0 1075 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 RIMBP2O15034 1052 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 UFL1O94874 794 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 POTEIP0CG38 1075 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 POTEGQ6S5H5 508 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 POTEEQ6S8J3 1075 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 ANKS1AQ92625 1134 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 SH3GL2Q99962 352 aa14.9□□□□□ -0.02
CTTN-201ENST00000301843 USP17L10C9JJH3 530 aa14.89□□□□□ -0.03
CTTN-201ENST00000301843 GOLGA8KD6RF30 607 aa14.89□□□□□ -0.03
CTTN-201ENST00000301843 FLT3P36888 993 aa14.89□□□□□ -0.03
CTTN-201ENST00000301843 MFSD14BQ5SR56 506 aa14.89□□□□□ -0.03
CTTN-201ENST00000301843 GPBP1Q86WP2 473 aa14.89□□□□□ -0.03
CTTN-201ENST00000301843 IFT20Q8IY31 132 aa14.89□□□□□ -0.03
CTTN-201ENST00000301843 WDR66Q8TBY9 1149 aa14.89□□□□□ -0.03
CTTN-201ENST00000301843 PLAAQ9Y263 795 aa14.89□□□□□ -0.03
CTTN-201ENST00000301843 RTCBQ9Y3I0 505 aaKnown RBP14.89□□□□□ -0.03
CTTN-201ENST00000301843 SFI1A8K8P3 1242 aa14.89□□□□□ -0.03
CTTN-201ENST00000301843 ITGA4P13612 1032 aa14.89□□□□□ -0.03
CTTN-201ENST00000301843 INPP5BP32019 993 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms