RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 YWHAHQ04917 246 aaPredicted RBP12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 EIF4A2Q14240 407 aaKnown RBP12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 ZNF710Q8N1W2 664 aa12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 OTULINQ96BN8 352 aa12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 ZFP69BQ9UJL9 534 aa12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 H0Y3Z8 333 aa12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 PUDPQ08623 228 aa12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 TRIM66O15016 1216 aa12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 TBC1D4O60343 1298 aa12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 TOMM70O94826 608 aa12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 CPP00450 1065 aa12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 TMED2Q15363 201 aa12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 NELFBQ8WX92 580 aa12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 MLPHQ9BV36 600 aaPredicted RBP12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 PLS3P13797 630 aa12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 TBL3Q12788 808 aaKnown RBP12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 SZRD1Q7Z422 152 aa12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 C2CD5Q86YS7 1000 aa12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 ZBTB18Q99592 522 aa12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 OLFM1Q99784 485 aa12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 CARD9Q9H257 536 aa12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 NR1I2O75469 434 aa12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 IFNL2Q8IZJ0 200 aa12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 PPP2R2CQ9Y2T4 447 aa12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 TCOF1Q13428 1488 aaKnown RBP12.03□□□□□ -0.48
HDGFL3-201ENST00000299633 KLHL30Q0D2K2 578 aa12.02□□□□□ -0.48
HDGFL3-201ENST00000299633 MYLK4Q86YV6 388 aaPredicted RBP12.02□□□□□ -0.48
HDGFL3-201ENST00000299633 ZNF555Q8NEP9 628 aa12.02□□□□□ -0.48
HDGFL3-201ENST00000299633 TMEM60Q9H2L4 133 aa12.02□□□□□ -0.48
HDGFL3-201ENST00000299633 RNF103-CHMP3A0A140T963 221 aa12.02□□□□□ -0.48
HDGFL3-201ENST00000299633 SGK1O00141 431 aa12.02□□□□□ -0.48
HDGFL3-201ENST00000299633 RNF113AO15541 343 aaKnown RBP12.02□□□□□ -0.48
HDGFL3-201ENST00000299633 HAUS3Q68CZ6 603 aa12.02□□□□□ -0.48
HDGFL3-201ENST00000299633 LSM14BQ9BX40 385 aaKnown RBP12.02□□□□□ -0.48
HDGFL3-201ENST00000299633 KLHL25Q9H0H3 589 aa12.02□□□□□ -0.48
HDGFL3-201ENST00000299633 MYO1EQ12965 1108 aa12.02□□□□□ -0.48
HDGFL3-201ENST00000299633 CKAP5Q14008 2032 aa12.02□□□□□ -0.48
HDGFL3-201ENST00000299633 ZSCAN9O15535 394 aaPredicted RBP12.02□□□□□ -0.48
HDGFL3-201ENST00000299633 CCNT1O60563 726 aaKnown RBP12.02□□□□□ -0.48
HDGFL3-201ENST00000299633 MIGA1Q8NAN2 632 aa12.02□□□□□ -0.48
HDGFL3-201ENST00000299633 LETM2Q2VYF4 491 aa12.02□□□□□ -0.49
HDGFL3-201ENST00000299633 TDRD7Q8NHU6 1098 aaKnown RBP12.02□□□□□ -0.49
HDGFL3-201ENST00000299633 GPR101Q96P66 508 aaPredicted RBP12.02□□□□□ -0.49
HDGFL3-201ENST00000299633 MAGEB6P1A0A0J9YX57 407 aa12.02□□□□□ -0.49
HDGFL3-201ENST00000299633 LRRIQ3A6PVS8 624 aaPredicted RBP12.02□□□□□ -0.49
HDGFL3-201ENST00000299633 CCPG1Q9ULG6 757 aa12.02□□□□□ -0.49
HDGFL3-201ENST00000299633 SPDYE1Q8NFV5 336 aaPredicted RBP12.02□□□□□ -0.49
HDGFL3-201ENST00000299633 POLR2DO15514 142 aaKnown RBP12.02□□□□□ -0.49
HDGFL3-201ENST00000299633 CYTH1Q15438 398 aa12.02□□□□□ -0.49
HDGFL3-201ENST00000299633 ADNPQ9H2P0 1102 aa12.02□□□□□ -0.49
HDGFL3-201ENST00000299633 SMCO2A6NFE2 343 aa12.02□□□□□ -0.49
HDGFL3-201ENST00000299633 UQCRFS1P1P0C7P4 283 aa12.02□□□□□ -0.49
HDGFL3-201ENST00000299633 GUCY2DQ02846 1103 aa12.02□□□□□ -0.49
HDGFL3-201ENST00000299633 POSTNQ15063 836 aa12.02□□□□□ -0.49
HDGFL3-201ENST00000299633 CHEK2O96017 543 aa12.02□□□□□ -0.49
HDGFL3-201ENST00000299633 NLRP12P59046 1061 aa12.02□□□□□ -0.49
HDGFL3-201ENST00000299633 PTPN21Q16825 1174 aa12.02□□□□□ -0.49
HDGFL3-201ENST00000299633 RRAGAQ7L523 313 aa12.02□□□□□ -0.49
HDGFL3-201ENST00000299633 HNRNPRO43390 633 aaKnown RBP12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 EPHB4P54760 987 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 YWHAGP61981 247 aaKnown RBP eCLIP12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 MRPL44Q9H9J2 332 aaKnown RBP12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 KCNH3Q9ULD8 1083 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 OLFML1Q6UWY5 402 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 KSR2Q6VAB6 950 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 KIF9Q9HAQ2 790 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 ZNF608Q9ULD9 1512 aaPredicted RBP12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 TPP2P29144 1249 aaPredicted RBP12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 AARSP49588 968 aaKnown RBP eCLIP12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 ARHGAP17Q68EM7 881 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 BZW1Q7L1Q6 419 aaKnown RBP12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 PHACTR3Q96KR7 559 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 SYNMO15061 1565 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 NR1D1P20393 614 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 DHX32Q7L7V1 743 aaKnown RBP12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 CCDC84Q86UT8 332 aaPredicted RBP12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 MCUQ8NE86 351 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 TAB2Q9NYJ8 693 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 FIS1Q9Y3D6 152 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 GCFC2P16383 781 aaKnown RBP12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 BTN2A2Q8WVV5 523 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 NCOA5Q9HCD5 579 aaKnown RBP12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 EHD2Q9NZN4 543 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 ZBTB21Q9ULJ3 1066 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 SHANK2Q9UPX8 1470 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 CFAP73A6NFT4 308 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 ZNF202O95125 648 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 RUNX1T1Q06455 604 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 SPATA2Q9UM82 520 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 MORC2Q9Y6X9 1032 aaPredicted RBP12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 DENND4BO75064 1496 aaPredicted RBP12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 USP33Q8TEY7 942 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 SMAPO00193 183 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 DNALI1O14645 258 aaPredicted RBP12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 ATP8B1O43520 1251 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 PITPNM3Q9BZ71 974 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 FBXL5Q9UKA1 691 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 RPS6KB1P23443 525 aa12.01□□□□□ -0.49
HDGFL3-201ENST00000299633 ITGB1BP2Q9UKP3 347 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 206.4 ms