RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 SNX12Q9UMY4 172 aa17.77■□□□□ 0.43
PDZRN3-201ENST00000263666 LEMD3Q9Y2U8 911 aa17.77■□□□□ 0.43
PDZRN3-201ENST00000263666 CAMTA1Q9Y6Y1 1673 aa17.77■□□□□ 0.43
PDZRN3-201ENST00000263666 EPHB6O15197 1021 aa17.77■□□□□ 0.43
PDZRN3-201ENST00000263666 RHOBTB3O94955 611 aa17.77■□□□□ 0.43
PDZRN3-201ENST00000263666 PLA2G4BP0C869 781 aa17.77■□□□□ 0.43
PDZRN3-201ENST00000263666 RASA1P20936 1047 aa17.77■□□□□ 0.43
PDZRN3-201ENST00000263666 ADCY1Q08828 1119 aa17.77■□□□□ 0.43
PDZRN3-201ENST00000263666 CCDC121Q6ZUS5 278 aa17.77■□□□□ 0.43
PDZRN3-201ENST00000263666 OR2W6PQ8NHA6 318 aa17.77■□□□□ 0.43
PDZRN3-201ENST00000263666 DDX47Q9H0S4 455 aaKnown RBP17.77■□□□□ 0.43
PDZRN3-201ENST00000263666 ITIH6Q6UXX5 1313 aa17.76■□□□□ 0.43
PDZRN3-201ENST00000263666 CARSP49589 748 aaKnown RBP17.76■□□□□ 0.43
PDZRN3-201ENST00000263666 GUCY1A3Q02108 690 aa17.76■□□□□ 0.43
PDZRN3-201ENST00000263666 SH3RF1Q7Z6J0 888 aa17.76■□□□□ 0.43
PDZRN3-201ENST00000263666 RETREG2Q8NC44 543 aa17.76■□□□□ 0.43
PDZRN3-201ENST00000263666 NUDT12Q9BQG2 462 aa17.76■□□□□ 0.43
PDZRN3-201ENST00000263666 DBNDD1Q9H9R9 158 aa17.76■□□□□ 0.43
PDZRN3-201ENST00000263666 REXO2Q9Y3B8 237 aaKnown RBP17.76■□□□□ 0.43
PDZRN3-201ENST00000263666 PPP1R2P41236 205 aa17.76■□□□□ 0.43
PDZRN3-201ENST00000263666 EXOC3L4Q17RC7 722 aa17.76■□□□□ 0.43
PDZRN3-201ENST00000263666 TMED8Q6PL24 325 aaPredicted RBP17.76■□□□□ 0.43
PDZRN3-201ENST00000263666 MICALCLQ6ZW33 695 aa17.76■□□□□ 0.43
PDZRN3-201ENST00000263666 KCND1Q9NSA2 647 aa17.76■□□□□ 0.43
PDZRN3-201ENST00000263666 SORBS3O60504 671 aa17.76■□□□□ 0.43
PDZRN3-201ENST00000263666 IFI16Q16666 785 aaKnown RBP17.76■□□□□ 0.43
PDZRN3-201ENST00000263666 CCNI2Q6ZMN8 369 aaPredicted RBP17.76■□□□□ 0.43
PDZRN3-201ENST00000263666 PHLDB2Q86SQ0 1253 aa17.76■□□□□ 0.43
PDZRN3-201ENST00000263666 SH2D3AQ9BRG2 576 aa17.76■□□□□ 0.43
PDZRN3-201ENST00000263666 HOMER2Q9NSB8 354 aa17.76■□□□□ 0.43
PDZRN3-201ENST00000263666 GCOM1H8Y6P7 765 aaPredicted RBP17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 PPFIA4O75335 1185 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 MYZAPP0CAP1 466 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 EPHB4P54760 987 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 TRAPPC11Q7Z392 1133 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 CNKSR1Q969H4 720 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 COASYQ13057 564 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 RCSD1Q6JBY9 416 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 UNC13DQ70J99 1090 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 FBXO33Q7Z6M2 555 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 PLCD4Q9BRC7 762 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 SEMA6BQ9H3T3 888 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 CTTNBP2NLQ9P2B4 639 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 TNFAIP3P21580 790 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 NAALADL2Q58DX5 795 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 SLC27A3Q5K4L6 730 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 GALNT17Q6IS24 598 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 DUSP9Q99956 384 aaKnown RBP17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 MTA3Q9BTC8 594 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 CCSER1Q9C0I3 900 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 BHMT2Q9H2M3 363 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 CD209Q9NNX6 404 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 ARHGAP20Q9P2F6 1191 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 ANAPC4Q9UJX5 808 aa17.75■□□□□ 0.43
PDZRN3-201ENST00000263666 A0A1W2PQC6 194 aa17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 ADRA2BP18089 450 aa17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 IFNAR2P48551 515 aa17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 MAP2K1Q02750 393 aaPredicted RBP17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 FUT2Q10981 343 aa17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 IRF2BP1Q8IU81 584 aa17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 PDS5AQ29RF7 1337 aaKnown RBP17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 EXOC3O60645 756 aa17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 VIMP08670 466 aaKnown RBP17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 SLCO1A2P46721 670 aa17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 CPXCR1Q8N123 301 aa17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 ARL8AQ96BM9 186 aa17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 SERPINB13Q9UIV8 391 aa17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 LAD1O00515 517 aa17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 WDR59Q6PJI9 974 aa17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 MSANTD4Q8NCY6 345 aa17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 CABS1Q96KC9 395 aa17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 CHORDC1Q9UHD1 332 aaPredicted RBP17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 ATP8A1Q9Y2Q0 1164 aa17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 LRRC37A3O60309 1634 aa17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 NEFHP12036 1026 aa17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 LRRC31Q6UY01 552 aa17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 PACSIN1Q9BY11 444 aa17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 CUEDC2Q9H467 287 aa17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 FAM169AQ9Y6X4 670 aa17.74■□□□□ 0.43
PDZRN3-201ENST00000263666 GOLGA6L10A0A0M3HER8 536 aa17.73■□□□□ 0.43
PDZRN3-201ENST00000263666 PSMD14O00487 310 aa17.73■□□□□ 0.43
PDZRN3-201ENST00000263666 FLOT1O75955 427 aa17.73■□□□□ 0.43
PDZRN3-201ENST00000263666 SLFN13Q68D06 897 aa17.73■□□□□ 0.43
PDZRN3-201ENST00000263666 PCIF1Q9H4Z3 704 aa17.73■□□□□ 0.43
PDZRN3-201ENST00000263666 TMEM51Q9NW97 253 aa17.73■□□□□ 0.43
PDZRN3-201ENST00000263666 H2AFZP0C0S5 128 aa17.73■□□□□ 0.43
PDZRN3-201ENST00000263666 ZNF211Q13398 564 aaPredicted RBP17.73■□□□□ 0.43
PDZRN3-201ENST00000263666 KCNB1Q14721 858 aa17.73■□□□□ 0.43
PDZRN3-201ENST00000263666 H2AFVQ71UI9 128 aa17.73■□□□□ 0.43
PDZRN3-201ENST00000263666 DNAJC17Q9NVM6 304 aaKnown RBP17.73■□□□□ 0.43
PDZRN3-201ENST00000263666 KLRC1P26715 233 aa17.73■□□□□ 0.43
PDZRN3-201ENST00000263666 KCNH2Q12809 1159 aa17.73■□□□□ 0.43
PDZRN3-201ENST00000263666 HAUS3Q68CZ6 603 aa17.73■□□□□ 0.43
PDZRN3-201ENST00000263666 KCNK9Q9NPC2 374 aa17.73■□□□□ 0.43
PDZRN3-201ENST00000263666 RPL13P26373 211 aaKnown RBP17.72■□□□□ 0.43
PDZRN3-201ENST00000263666 SEC24CP53992 1094 aa17.72■□□□□ 0.43
PDZRN3-201ENST00000263666 GPSM2P81274 684 aa17.72■□□□□ 0.43
PDZRN3-201ENST00000263666 CTTNQ14247 550 aaKnown RBP17.72■□□□□ 0.43
PDZRN3-201ENST00000263666 ALKBH5Q6P6C2 394 aaKnown RBP17.72■□□□□ 0.43
PDZRN3-201ENST00000263666 KIAA0895Q8NCT3 520 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms