RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 ACTN1P12814 892 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 AKR1B1P15121 316 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 PRDX5P30044 214 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 ACTN3Q08043 901 aaPredicted RBP5.03□□□□□ -1.6
VPS13C-201ENST00000249837 SETDB1Q15047 1291 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 OTUD6AQ7L8S5 288 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 COG1Q8WTW3 980 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 CDCA7Q9BWT1 371 aaPredicted RBP5.03□□□□□ -1.6
VPS13C-201ENST00000249837 MON2Q7Z3U7 1717 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 USP17L10C9JJH3 530 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 KRT15P19012 456 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 CERKLQ49MI3 558 aaPredicted RBP5.03□□□□□ -1.6
VPS13C-201ENST00000249837 PDXDC1Q6P996 788 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 SRLQ86TD4 932 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 DGKHQ86XP1 1220 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 TAB3Q8N5C8 712 aaPredicted RBP5.03□□□□□ -1.6
VPS13C-201ENST00000249837 DDX12PQ92771 950 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 CEP95Q96GE4 821 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 PLA2G12BQ9BX93 195 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 THRAP3Q9Y2W1 955 aaKnown RBP5.03□□□□□ -1.6
VPS13C-201ENST00000249837 FMN2Q9NZ56 1722 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 PNMA6FA0A0J9YX94 578 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 POTEFA5A3E0 1075 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 AFPP02771 609 aaKnown RBP5.03□□□□□ -1.6
VPS13C-201ENST00000249837 POTEIP0CG38 1075 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 FERP16591 822 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 WDR44Q5JSH3 913 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 POTEGQ6S5H5 508 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 POTEEQ6S8J3 1075 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 RSRC1Q96IZ7 334 aaKnown RBP5.03□□□□□ -1.6
VPS13C-201ENST00000249837 FEZ2Q9UHY8 353 aaPredicted RBP5.03□□□□□ -1.6
VPS13C-201ENST00000249837 PCDHA6Q9UN73 950 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 PCDHA8Q9Y5H6 950 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 LRRC63Q05C16 580 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 NTRK3Q16288 839 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 ODR4Q5SWX8 454 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 TTBK2Q6IQ55 1244 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 DDX42Q86XP3 938 aaKnown RBP eCLIP5.03□□□□□ -1.6
VPS13C-201ENST00000249837 TEKT1Q969V4 418 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 FAM133BQ5BKY9 247 aaKnown RBP5.03□□□□□ -1.6
VPS13C-201ENST00000249837 ALKBH5Q6P6C2 394 aaKnown RBP5.03□□□□□ -1.6
VPS13C-201ENST00000249837 BRINP3Q76B58 766 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 CLEC10AQ8IUN9 316 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 DAAM1Q9Y4D1 1078 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 KLRK1P26718 216 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 MYL7Q01449 175 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 COASYQ13057 564 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 FAM196AQ6ZSG2 479 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 KIFAP3Q92845 792 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 DDX47Q9H0S4 455 aaKnown RBP5.03□□□□□ -1.6
VPS13C-201ENST00000249837 RBM12Q9NTZ6 932 aaKnown RBP5.03□□□□□ -1.6
VPS13C-201ENST00000249837 PLAAQ9Y263 795 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 ZNF18P17022 549 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 ZNF746Q6NUN9 644 aaPredicted RBP5.03□□□□□ -1.6
VPS13C-201ENST00000249837 MARCH10Q8NA82 808 aaPredicted RBP5.03□□□□□ -1.6
VPS13C-201ENST00000249837 IQCGQ9H095 443 aaKnown RBP5.03□□□□□ -1.6
VPS13C-201ENST00000249837 RICTORQ6R327 1708 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.03□□□□□ -1.6
VPS13C-201ENST00000249837 A0A1B0GUA9 196 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 KCNH2Q12809 1159 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 WHAMMQ8TF30 809 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 THOC1Q96FV9 657 aaKnown RBP5.03□□□□□ -1.6
VPS13C-201ENST00000249837 CCSER1Q9C0I3 900 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 HOMER3Q9NSC5 361 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 PTPN22Q9Y2R2 807 aa5.03□□□□□ -1.6
VPS13C-201ENST00000249837 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.03□□□□□ -1.6
VPS13C-201ENST00000249837 K7ENM7 598 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 TTLL1O95922 423 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 HOXA13P31271 388 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-201ENST00000249837 ADCY8P40145 1251 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 CACNB3P54284 484 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 GUCY1A3Q02108 690 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 SLFN12Q8IYM2 578 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 FAM114A2Q9NRY5 505 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 MYL1P05976 194 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 ADCY1Q08828 1119 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 PIGOQ8TEQ8 1089 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 AMNQ9BXJ7 453 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 TRIM7Q9C029 511 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 FBXL5Q9UKA1 691 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 HPCAL4Q9UM19 191 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 RABGAP1Q9Y3P9 1069 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 MEGF6O75095 1541 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 PEAK1Q9H792 1746 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 E9PMD0 336 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 SRGNP10124 158 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 ERVK-24P63145 666 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 EZH2Q15910 746 aaKnown RBP5.02□□□□□ -1.61
VPS13C-201ENST00000249837 NSMFQ6X4W1 530 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 SFR1Q86XK3 245 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 FUT8Q9BYC5 575 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 CNTNAP5Q8WYK1 1306 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 CARSP49589 748 aaKnown RBP5.02□□□□□ -1.61
VPS13C-201ENST00000249837 TBX2Q13207 712 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-201ENST00000249837 FBXW10Q5XX13 1052 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 ZNF34Q8IZ26 560 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 TTC16Q8NEE8 873 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 ARL8AQ96BM9 186 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 CD2APQ9Y5K6 639 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 BZW2Q9Y6E2 419 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms