RNA–Protein interactions for RNA: ENST00000640298.1

RHOXF1P3-203, Transcript of Rhox homeobox family member 1 pseudogene 3, humanhuman

TSL 5 BASIC

Gene RHOXF1P3, Length 2,668 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1P3-203ENST00000640298 SEPT2Q15019 361 aa17.11■□□□□ 0.33
RHOXF1P3-203ENST00000640298 SND1Q7KZF4 910 aaKnown RBP eCLIP17.11■□□□□ 0.33
RHOXF1P3-203ENST00000640298 KCNK18Q7Z418 384 aa17.11■□□□□ 0.33
RHOXF1P3-203ENST00000640298 SYN2Q92777 582 aaPredicted RBP17.11■□□□□ 0.33
RHOXF1P3-203ENST00000640298 NUCKS1Q9H1E3 243 aaKnown RBP17.11■□□□□ 0.33
RHOXF1P3-203ENST00000640298 STIM2Q9P246 746 aa17.11■□□□□ 0.33
RHOXF1P3-203ENST00000640298 GOLGA6CA6NDK9 693 aa17.11■□□□□ 0.33
RHOXF1P3-203ENST00000640298 GOLGA6DP0CG33 693 aa17.11■□□□□ 0.33
RHOXF1P3-203ENST00000640298 TNFRSF8P28908 595 aa17.11■□□□□ 0.33
RHOXF1P3-203ENST00000640298 PAFAH1B1P43034 410 aa17.11■□□□□ 0.33
RHOXF1P3-203ENST00000640298 FKBP3Q00688 224 aaKnown RBP17.11■□□□□ 0.33
RHOXF1P3-203ENST00000640298 CCDC181Q5TID7 509 aa17.11■□□□□ 0.33
RHOXF1P3-203ENST00000640298 PPP4R3AQ6IN85 833 aa17.11■□□□□ 0.33
RHOXF1P3-203ENST00000640298 EMBQ6PCB8 327 aa17.11■□□□□ 0.33
RHOXF1P3-203ENST00000640298 CACNA2D4Q7Z3S7 1137 aa17.11■□□□□ 0.33
RHOXF1P3-203ENST00000640298 MTMR8Q96EF0 704 aa17.11■□□□□ 0.33
RHOXF1P3-203ENST00000640298 NOX5Q96PH1 765 aa17.11■□□□□ 0.33
RHOXF1P3-203ENST00000640298 SH3GL2Q99962 352 aa17.11■□□□□ 0.33
RHOXF1P3-203ENST00000640298 CD209Q9NNX6 404 aa17.11■□□□□ 0.33
RHOXF1P3-203ENST00000640298 GOLGA6AQ9NYA3 693 aa17.11■□□□□ 0.33
RHOXF1P3-203ENST00000640298 RSPH14Q9UHP6 348 aa17.11■□□□□ 0.33
RHOXF1P3-203ENST00000640298 DDX60LQ5H9U9 1706 aaKnown RBP17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 CXCR5P32302 372 aa17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 EPHB4P54760 987 aa17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 GFPT1Q06210 699 aaPredicted RBP17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 ASPRV1Q53RT3 343 aa17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 KLHDC7AQ5VTJ3 777 aa17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 HAUS3Q68CZ6 603 aa17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 CNBD1Q8NA66 436 aa17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 GLIS3Q8NEA6 775 aa17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 COA7Q96BR5 231 aa17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 DNAJC19Q96DA6 116 aa17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 RNF14Q9UBS8 474 aa17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 TSKSQ9UJT2 592 aa17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 SNHG28P0DPA3 235 aa17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 GLE1Q53GS7 698 aaKnown RBP17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 MYOCDQ8IZQ8 938 aa17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 GPR101Q96P66 508 aaPredicted RBP17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 HINFPQ9BQA5 517 aa17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 MTMR4Q9NYA4 1195 aa17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 CEP72Q9P209 647 aa17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 COL4A3BPQ9Y5P4 624 aa17.1■□□□□ 0.33
RHOXF1P3-203ENST00000640298 IL1R1P14778 569 aa17.09■□□□□ 0.33
RHOXF1P3-203ENST00000640298 RASSF7Q02833 373 aa17.09■□□□□ 0.33
RHOXF1P3-203ENST00000640298 LRRC41Q15345 812 aa17.09■□□□□ 0.33
RHOXF1P3-203ENST00000640298 TNRC6CQ9HCJ0 1690 aaKnown RBP17.09■□□□□ 0.33
RHOXF1P3-203ENST00000640298 PLIN4Q96Q06 1357 aa17.09■□□□□ 0.33
RHOXF1P3-203ENST00000640298 SLC1A4P43007 532 aa17.09■□□□□ 0.33
RHOXF1P3-203ENST00000640298 SLC7A5Q01650 507 aa17.09■□□□□ 0.33
RHOXF1P3-203ENST00000640298 ATP2B2Q01814 1243 aa17.09■□□□□ 0.33
RHOXF1P3-203ENST00000640298 ANKRD13CQ8N6S4 541 aa17.09■□□□□ 0.33
RHOXF1P3-203ENST00000640298 CAVIN3Q969G5 261 aa17.09■□□□□ 0.33
RHOXF1P3-203ENST00000640298 PSMB7Q99436 277 aa17.09■□□□□ 0.33
RHOXF1P3-203ENST00000640298 FRMPD2Q68DX3 1309 aaPredicted RBP17.08■□□□□ 0.33
RHOXF1P3-203ENST00000640298 GOLGA8KD6RF30 607 aa17.08■□□□□ 0.33
RHOXF1P3-203ENST00000640298 NOL4O94818 638 aa17.08■□□□□ 0.33
RHOXF1P3-203ENST00000640298 MATR3P43243 847 aaKnown RBP eCLIP17.08■□□□□ 0.33
RHOXF1P3-203ENST00000640298 COASYQ13057 564 aa17.08■□□□□ 0.33
RHOXF1P3-203ENST00000640298 ECM1Q16610 540 aa17.08■□□□□ 0.33
RHOXF1P3-203ENST00000640298 SLC9C1Q4G0N8 1177 aa17.08■□□□□ 0.33
RHOXF1P3-203ENST00000640298 PPP1R18Q6NYC8 613 aa17.08■□□□□ 0.33
RHOXF1P3-203ENST00000640298 BBXQ8WY36 941 aaPredicted RBP17.08■□□□□ 0.33
RHOXF1P3-203ENST00000640298 TRIM34Q9BYJ4 488 aa17.08■□□□□ 0.33
RHOXF1P3-203ENST00000640298 TANGO6Q9C0B7 1094 aa17.08■□□□□ 0.33
RHOXF1P3-203ENST00000640298 GAKO14976 1311 aa17.08■□□□□ 0.32
RHOXF1P3-203ENST00000640298 NCK2O43639 380 aa17.08■□□□□ 0.32
RHOXF1P3-203ENST00000640298 TLR2O60603 784 aa17.08■□□□□ 0.32
RHOXF1P3-203ENST00000640298 SERPING1P05155 500 aa17.08■□□□□ 0.32
RHOXF1P3-203ENST00000640298 EPB41P11171 864 aaKnown RBP17.08■□□□□ 0.32
RHOXF1P3-203ENST00000640298 ERCC3P19447 782 aa17.08■□□□□ 0.32
RHOXF1P3-203ENST00000640298 CORO7P57737 925 aa17.08■□□□□ 0.32
RHOXF1P3-203ENST00000640298 PPFIA1Q13136 1202 aa17.08■□□□□ 0.32
RHOXF1P3-203ENST00000640298 FAM83BQ5T0W9 1011 aa17.08■□□□□ 0.32
RHOXF1P3-203ENST00000640298 ALS2CLQ60I27 953 aa17.08■□□□□ 0.32
RHOXF1P3-203ENST00000640298 SLF2Q8IX21 1173 aa17.08■□□□□ 0.32
RHOXF1P3-203ENST00000640298 CEP63Q96MT8 703 aa17.08■□□□□ 0.32
RHOXF1P3-203ENST00000640298 SMARCAL1Q9NZC9 954 aa17.08■□□□□ 0.32
RHOXF1P3-203ENST00000640298 OPA1O60313 960 aa17.07■□□□□ 0.32
RHOXF1P3-203ENST00000640298 TRIM37O94972 964 aa17.07■□□□□ 0.32
RHOXF1P3-203ENST00000640298 MAGEA9P43362 315 aa17.07■□□□□ 0.32
RHOXF1P3-203ENST00000640298 CLK2P49760 499 aaKnown RBP17.07■□□□□ 0.32
RHOXF1P3-203ENST00000640298 MARSP56192 900 aaKnown RBP17.07■□□□□ 0.32
RHOXF1P3-203ENST00000640298 CFAP221Q4G0U5 840 aa17.07■□□□□ 0.32
RHOXF1P3-203ENST00000640298 TDRD12Q587J7 1177 aaKnown RBP17.07■□□□□ 0.32
RHOXF1P3-203ENST00000640298 HYIQ5T013 277 aa17.07■□□□□ 0.32
RHOXF1P3-203ENST00000640298 C8orf74Q6P047 294 aa17.07■□□□□ 0.32
RHOXF1P3-203ENST00000640298 GBP6Q6ZN66 633 aa17.07■□□□□ 0.32
RHOXF1P3-203ENST00000640298 HAS1Q92839 578 aa17.07■□□□□ 0.32
RHOXF1P3-203ENST00000640298 ZFP91Q96JP5 570 aaPredicted RBP17.07■□□□□ 0.32
RHOXF1P3-203ENST00000640298 RBM12Q9NTZ6 932 aaKnown RBP17.07■□□□□ 0.32
RHOXF1P3-203ENST00000640298 EHD2Q9NZN4 543 aa17.07■□□□□ 0.32
RHOXF1P3-203ENST00000640298 TRAF5O00463 557 aa17.07■□□□□ 0.32
RHOXF1P3-203ENST00000640298 IRAK1P51617 712 aa17.07■□□□□ 0.32
RHOXF1P3-203ENST00000640298 GPSM2P81274 684 aa17.07■□□□□ 0.32
RHOXF1P3-203ENST00000640298 NNTQ13423 1086 aa17.07■□□□□ 0.32
RHOXF1P3-203ENST00000640298 DNAJC21Q5F1R6 531 aaKnown RBP17.07■□□□□ 0.32
RHOXF1P3-203ENST00000640298 FAM26FQ5R3K3 315 aa17.07■□□□□ 0.32
RHOXF1P3-203ENST00000640298 SFMBT2Q5VUG0 894 aa17.07■□□□□ 0.32
RHOXF1P3-203ENST00000640298 PNMA6FA0A0J9YX94 578 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms