RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 GRAPQ13588 217 aa16.1■□□□□ 0.17
CLN6-215ENST00000636674 HGSNATQ68CP4 663 aa16.1■□□□□ 0.17
CLN6-215ENST00000636674 HAUS3Q68CZ6 603 aa16.1■□□□□ 0.17
CLN6-215ENST00000636674 PPP1R18Q6NYC8 613 aa16.1■□□□□ 0.17
CLN6-215ENST00000636674 RRAGAQ7L523 313 aa16.1■□□□□ 0.17
CLN6-215ENST00000636674 GRAPLQ8TC17 118 aaPredicted RBP16.1■□□□□ 0.17
CLN6-215ENST00000636674 CEP95Q96GE4 821 aa16.1■□□□□ 0.17
CLN6-215ENST00000636674 MMRN2Q9H8L6 949 aa16.1■□□□□ 0.17
CLN6-215ENST00000636674 GOLGA6AQ9NYA3 693 aa16.1■□□□□ 0.17
CLN6-215ENST00000636674 STIM2Q9P246 746 aa16.1■□□□□ 0.17
CLN6-215ENST00000636674 BIN2Q9UBW5 565 aaPredicted RBP16.1■□□□□ 0.17
CLN6-215ENST00000636674 SAP30BPQ9UHR5 308 aaKnown RBP16.1■□□□□ 0.17
CLN6-215ENST00000636674 DMGDHQ9UI17 866 aaKnown RBP16.1■□□□□ 0.17
CLN6-215ENST00000636674 KIF13BQ9NQT8 1826 aa16.1■□□□□ 0.17
CLN6-215ENST00000636674 EDIL3O43854 480 aa16.09■□□□□ 0.17
CLN6-215ENST00000636674 BTDP43251 543 aa16.09■□□□□ 0.17
CLN6-215ENST00000636674 MAGEA9P43362 315 aa16.09■□□□□ 0.17
CLN6-215ENST00000636674 CORO7P57737 925 aa16.09■□□□□ 0.17
CLN6-215ENST00000636674 R3HDM1Q15032 1099 aaKnown RBP16.09■□□□□ 0.17
CLN6-215ENST00000636674 NFRKBQ6P4R8 1299 aa16.09■□□□□ 0.17
CLN6-215ENST00000636674 TLR10Q9BXR5 811 aa16.09■□□□□ 0.17
CLN6-215ENST00000636674 CEP72Q9P209 647 aa16.09■□□□□ 0.17
CLN6-215ENST00000636674 SLC37A4O43826 429 aa16.09■□□□□ 0.17
CLN6-215ENST00000636674 PAFAH1B1P43034 410 aa16.09■□□□□ 0.17
CLN6-215ENST00000636674 ADCY7P51828 1080 aa16.09■□□□□ 0.17
CLN6-215ENST00000636674 PPFIA1Q13136 1202 aa16.09■□□□□ 0.17
CLN6-215ENST00000636674 ASPRV1Q53RT3 343 aa16.09■□□□□ 0.17
CLN6-215ENST00000636674 SLC27A3Q5K4L6 730 aa16.09■□□□□ 0.17
CLN6-215ENST00000636674 ALS2CLQ60I27 953 aa16.09■□□□□ 0.17
CLN6-215ENST00000636674 PPP4R3AQ6IN85 833 aa16.09■□□□□ 0.17
CLN6-215ENST00000636674 SND1Q7KZF4 910 aaKnown RBP eCLIP16.09■□□□□ 0.177e-7■□□□□ 8.6
CLN6-215ENST00000636674 HDAC7Q8WUI4 952 aa16.09■□□□□ 0.17
CLN6-215ENST00000636674 ZBTB9Q96C00 473 aa16.09■□□□□ 0.17
CLN6-215ENST00000636674 FAM163AQ96GL9 167 aaPredicted RBP16.09■□□□□ 0.17
CLN6-215ENST00000636674 GDAP1L1Q96MZ0 367 aa16.09■□□□□ 0.17
CLN6-215ENST00000636674 NOX5Q96PH1 765 aa16.09■□□□□ 0.17
CLN6-215ENST00000636674 TMEM260Q9NX78 707 aa16.09■□□□□ 0.17
CLN6-215ENST00000636674 ANKIB1Q9P2G1 1089 aa16.09■□□□□ 0.17
CLN6-215ENST00000636674 TAF1LQ8IZX4 1826 aa16.08■□□□□ 0.17
CLN6-215ENST00000636674 OPA1O60313 960 aa16.08■□□□□ 0.16
CLN6-215ENST00000636674 ZPR1O75312 459 aa16.08■□□□□ 0.16
CLN6-215ENST00000636674 SNHG28P0DPA3 235 aa16.08■□□□□ 0.16
CLN6-215ENST00000636674 PDHBP11177 359 aa16.08■□□□□ 0.16
CLN6-215ENST00000636674 MARSP56192 900 aaKnown RBP16.08■□□□□ 0.16
CLN6-215ENST00000636674 KCNMA1Q12791 1236 aa16.08■□□□□ 0.16
CLN6-215ENST00000636674 CCDC181Q5TID7 509 aa16.08■□□□□ 0.16
CLN6-215ENST00000636674 KLHDC7AQ5VTJ3 777 aa16.08■□□□□ 0.16
CLN6-215ENST00000636674 KRT79Q5XKE5 535 aa16.08■□□□□ 0.16
CLN6-215ENST00000636674 SNX29Q8TEQ0 813 aa16.08■□□□□ 0.16
CLN6-215ENST00000636674 DDX12PQ92771 950 aa16.08■□□□□ 0.16
CLN6-215ENST00000636674 TRIM34Q9BYJ4 488 aa16.08■□□□□ 0.16
CLN6-215ENST00000636674 SALL4Q9UJQ4 1053 aa16.08■□□□□ 0.16
CLN6-215ENST00000636674 MYH7BA7E2Y1 1941 aa16.08■□□□□ 0.16
CLN6-215ENST00000636674 QSER1Q2KHR3 1735 aa16.08■□□□□ 0.16
CLN6-215ENST00000636674 ARFGEF1Q9Y6D6 1849 aa16.08■□□□□ 0.16
CLN6-215ENST00000636674 TDP2O95551 362 aa16.07■□□□□ 0.16
CLN6-215ENST00000636674 FKBP3Q00688 224 aaKnown RBP16.07■□□□□ 0.16
CLN6-215ENST00000636674 HYIQ5T013 277 aa16.07■□□□□ 0.16
CLN6-215ENST00000636674 DYMQ7RTS9 669 aa16.07■□□□□ 0.16
CLN6-215ENST00000636674 TEX11Q8IYF3 940 aa16.07■□□□□ 0.16
CLN6-215ENST00000636674 BBXQ8WY36 941 aaPredicted RBP16.07■□□□□ 0.16
CLN6-215ENST00000636674 DNAJC19Q96DA6 116 aa16.07■□□□□ 0.16
CLN6-215ENST00000636674 MTMR8Q96EF0 704 aa16.07■□□□□ 0.16
CLN6-215ENST00000636674 CEP63Q96MT8 703 aa16.07■□□□□ 0.16
CLN6-215ENST00000636674 RSPH14Q9UHP6 348 aa16.07■□□□□ 0.16
CLN6-215ENST00000636674 COL4A3BPQ9Y5P4 624 aa16.07■□□□□ 0.16
CLN6-215ENST00000636674 GAKO14976 1311 aa16.07■□□□□ 0.16
CLN6-215ENST00000636674 POTEMA6NI47 508 aa16.07■□□□□ 0.16
CLN6-215ENST00000636674 USP17L5A8MUK1 530 aa16.07■□□□□ 0.16
CLN6-215ENST00000636674 SLC26A4O43511 780 aa16.07■□□□□ 0.16
CLN6-215ENST00000636674 NPM3O75607 178 aaKnown RBP16.07■□□□□ 0.16
CLN6-215ENST00000636674 SERPING1P05155 500 aa16.07■□□□□ 0.16
CLN6-215ENST00000636674 RHBDL3P58872 404 aa16.07■□□□□ 0.16
CLN6-215ENST00000636674 SLC9C1Q4G0N8 1177 aa16.07■□□□□ 0.16
CLN6-215ENST00000636674 C8orf74Q6P047 294 aa16.07■□□□□ 0.16
CLN6-215ENST00000636674 CACNA2D4Q7Z3S7 1137 aa16.07■□□□□ 0.16
CLN6-215ENST00000636674 MYOCDQ8IZQ8 938 aa16.07■□□□□ 0.16
CLN6-215ENST00000636674 DRC1Q96MC2 740 aa16.07■□□□□ 0.16
CLN6-215ENST00000636674 FAM107BQ9H098 131 aa16.07■□□□□ 0.16
CLN6-215ENST00000636674 LUC7LQ9NQ29 371 aaKnown RBP16.07■□□□□ 0.16
CLN6-215ENST00000636674 A6NNZ2 444 aa16.06■□□□□ 0.16
CLN6-215ENST00000636674 GNA14O95837 355 aa16.06■□□□□ 0.16
CLN6-215ENST00000636674 SLC1A4P43007 532 aa16.06■□□□□ 0.16
CLN6-215ENST00000636674 GFPT1Q06210 699 aaPredicted RBP16.06■□□□□ 0.16
CLN6-215ENST00000636674 COASYQ13057 564 aa16.06■□□□□ 0.16
CLN6-215ENST00000636674 TUBB8Q3ZCM7 444 aa16.06■□□□□ 0.16
CLN6-215ENST00000636674 CFAP221Q4G0U5 840 aa16.06■□□□□ 0.16
CLN6-215ENST00000636674 DNAJC21Q5F1R6 531 aaKnown RBP16.06■□□□□ 0.16
CLN6-215ENST00000636674 KCNK18Q7Z418 384 aa16.06■□□□□ 0.16
CLN6-215ENST00000636674 ZC3H3Q8IXZ2 948 aaKnown RBP16.06■□□□□ 0.16
CLN6-215ENST00000636674 LRRC4BQ9NT99 713 aa16.06■□□□□ 0.16
CLN6-215ENST00000636674 GRID2IPA4D2P6 1211 aa16.06■□□□□ 0.16
CLN6-215ENST00000636674 NOL4O94818 638 aa16.06■□□□□ 0.16
CLN6-215ENST00000636674 IL1R1P14778 569 aa16.06■□□□□ 0.16
CLN6-215ENST00000636674 CLK2P49760 499 aaKnown RBP16.06■□□□□ 0.16
CLN6-215ENST00000636674 IRAK1P51617 712 aa16.06■□□□□ 0.16
CLN6-215ENST00000636674 SKOR1P84550 965 aa16.06■□□□□ 0.16
CLN6-215ENST00000636674 APBA1Q02410 837 aa16.06■□□□□ 0.16
CLN6-215ENST00000636674 NFIXQ14938 502 aa16.06■□□□□ 0.16
CLN6-215ENST00000636674 NUDT12Q9BQG2 462 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms