RNA–Protein interactions for RNA: ENST00000636120.1

PDE4D-228, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 6,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-228ENST00000636120 SF3B3Q15393 1217 aaKnown RBP7.06□□□□□ -1.28
PDE4D-228ENST00000636120 TCP11X2Q5H9J9 407 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.06□□□□□ -1.28
PDE4D-228ENST00000636120 MROH1Q8NDA8 1641 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 LRRIQ4A6NIV6 560 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 FDX1P10109 184 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 ARHGEF6Q15052 776 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 NKX1-1Q15270 411 aaPredicted RBP7.06□□□□□ -1.28
PDE4D-228ENST00000636120 MAP7D1Q3KQU3 841 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 UNC13DQ70J99 1090 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 RAB3IL1Q8TBN0 382 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 MXD3Q9BW11 206 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 EMILIN3Q9NT22 766 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 MKRN1Q9UHC7 482 aaKnown RBP7.06□□□□□ -1.28
PDE4D-228ENST00000636120 ODF2LQ9ULJ1 636 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 CNTNAP4Q9C0A0 1308 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 CYP2D7A0A087X1C5 515 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 TLR3O15455 904 aaKnown RBP7.06□□□□□ -1.28
PDE4D-228ENST00000636120 NSFP46459 744 aaKnown RBP7.06□□□□□ -1.28
PDE4D-228ENST00000636120 RNASE9P60153 205 aaKnown RBP7.06□□□□□ -1.28
PDE4D-228ENST00000636120 GPSM2P81274 684 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 ZBED6P86452 979 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 RSPH3Q86UC2 560 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 GAS2L3Q86XJ1 694 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 TMEM47Q9BQJ4 181 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 RIOK1Q9BRS2 568 aaKnown RBP7.06□□□□□ -1.28
PDE4D-228ENST00000636120 MED7O43513 233 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 ATP2C2O75185 946 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 CIB2O75838 187 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 VIMP08670 466 aaKnown RBP7.06□□□□□ -1.28
PDE4D-228ENST00000636120 U2AF2P26368 475 aaKnown RBP eCLIP7.06□□□□□ -1.281e-6■■■□□ 16.3
PDE4D-228ENST00000636120 CYP4A11Q02928 519 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 UAP1Q16222 522 aaPredicted RBP7.06□□□□□ -1.28
PDE4D-228ENST00000636120 ENAHQ8N8S7 591 aaPredicted RBP7.06□□□□□ -1.28
PDE4D-228ENST00000636120 RABGGTAQ92696 567 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 DESI2Q9BSY9 194 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 MED10Q9BTT4 135 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 HESX1Q9UBX0 185 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 CDC23Q9UJX2 597 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 PNMA3Q9UL41 463 aa7.06□□□□□ -1.28
PDE4D-228ENST00000636120 ANKRD26Q9UPS8 1709 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 GSG1L2A8MUP6 293 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 LACTBP83111 547 aaPredicted RBP7.05□□□□□ -1.28
PDE4D-228ENST00000636120 GPR162Q16538 588 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 APOBEC3FQ8IUX4 373 aaKnown RBP7.05□□□□□ -1.28
PDE4D-228ENST00000636120 SPICE1Q8N0Z3 855 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 CCDC110Q8TBZ0 833 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 PBKQ96KB5 322 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 ZNF341Q9BYN7 854 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 BARHL2Q9NY43 387 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 HNRNPDLO14979 420 aaKnown RBP7.05□□□□□ -1.28
PDE4D-228ENST00000636120 SBK1Q52WX2 424 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 RINT1Q6NUQ1 792 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 SPATS2Q86XZ4 545 aaKnown RBP7.05□□□□□ -1.28
PDE4D-228ENST00000636120 PPM1KQ8N3J5 372 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 FNBP4Q8N3X1 1017 aaPredicted RBP7.05□□□□□ -1.28
PDE4D-228ENST00000636120 FAM20AQ96MK3 541 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 MED4Q9NPJ6 270 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 ANAPC4Q9UJX5 808 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 ZNF215Q9UL58 517 aaPredicted RBP7.05□□□□□ -1.28
PDE4D-228ENST00000636120 DIS3Q9Y2L1 958 aaKnown RBP7.05□□□□□ -1.28
PDE4D-228ENST00000636120 PASKQ96RG2 1323 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 HSPA6P17066 643 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 HPDP32754 393 aaPredicted RBP7.05□□□□□ -1.28
PDE4D-228ENST00000636120 ARHGAP25P42331 645 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 SLFN12LQ6IEE8 588 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 PPP1R21Q6ZMI0 780 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 TCP11Q8WWU5 503 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 CELF1Q92879 486 aaKnown RBP7.05□□□□□ -1.28
PDE4D-228ENST00000636120 FAM114A2Q9NRY5 505 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 FBXO40Q9UH90 709 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 PCDHA6Q9UN73 950 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 PCDHA8Q9Y5H6 950 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 PVALEFA0A1B0GWK0 134 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 ABCB4P21439 1286 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 OAS2P29728 719 aaKnown RBP7.05□□□□□ -1.28
PDE4D-228ENST00000636120 PRELPP51888 382 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 EXOSC10Q01780 885 aaKnown RBP7.05□□□□□ -1.28
PDE4D-228ENST00000636120 UBE2SQ16763 222 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 DNAJC21Q5F1R6 531 aaKnown RBP7.05□□□□□ -1.28
PDE4D-228ENST00000636120 HHATQ5VTY9 493 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 MICALL1Q8N3F8 863 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 GJA10Q969M2 543 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 BCL2L12Q9HB09 334 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 NWD1Q149M9 1564 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 I3L4J1 428 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 BUB1O43683 1085 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 DLATP10515 647 aaKnown RBP7.05□□□□□ -1.28
PDE4D-228ENST00000636120 ERCC3P19447 782 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 MB21D1Q8N884 522 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 RAD54LQ92698 747 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 GINS2Q9Y248 185 aa7.05□□□□□ -1.28
PDE4D-228ENST00000636120 USP17L5A8MUK1 530 aa7.04□□□□□ -1.28
PDE4D-228ENST00000636120 LDHAP00338 332 aaKnown RBP7.04□□□□□ -1.28
PDE4D-228ENST00000636120 COPB2P35606 906 aa7.04□□□□□ -1.28
PDE4D-228ENST00000636120 DDIT3P35638 169 aa7.04□□□□□ -1.28
PDE4D-228ENST00000636120 FAM84BQ96KN1 310 aaPredicted RBP7.04□□□□□ -1.28
PDE4D-228ENST00000636120 ZNF277Q9NRM2 450 aaPredicted RBP7.04□□□□□ -1.28
PDE4D-228ENST00000636120 ANKFY1Q9P2R3 1169 aa7.04□□□□□ -1.28
PDE4D-228ENST00000636120 DAAM1Q9Y4D1 1078 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms