RNA–Protein interactions for RNA: ENST00000602263.5

FARP1-240, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 867 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-240ENST00000602263 PTK7Q13308 1070 aa12.13□□□□□ -0.47
FARP1-240ENST00000602263 GRM4Q14833 912 aa12.13□□□□□ -0.47
FARP1-240ENST00000602263 CNKSR3Q6P9H4 555 aa12.13□□□□□ -0.47
FARP1-240ENST00000602263 ARNTL2Q8WYA1 636 aa12.13□□□□□ -0.47
FARP1-240ENST00000602263 MTMR8Q96EF0 704 aa12.13□□□□□ -0.47
FARP1-240ENST00000602263 UHRF1Q96T88 793 aaPredicted RBP12.13□□□□□ -0.47
FARP1-240ENST00000602263 ZBED2Q9BTP6 218 aa12.13□□□□□ -0.47
FARP1-240ENST00000602263 SIP14410 1827 aa12.13□□□□□ -0.47
FARP1-240ENST00000602263 PPP1R11O60927 126 aaPredicted RBP12.12□□□□□ -0.47
FARP1-240ENST00000602263 EFCAB14O75071 495 aa12.12□□□□□ -0.47
FARP1-240ENST00000602263 PPFIA4O75335 1185 aa12.12□□□□□ -0.47
FARP1-240ENST00000602263 GGPS1O95749 300 aa12.12□□□□□ -0.47
FARP1-240ENST00000602263 CYP21A2P08686 494 aa12.12□□□□□ -0.47
FARP1-240ENST00000602263 TGFB3P10600 412 aa12.12□□□□□ -0.47
FARP1-240ENST00000602263 CKBP12277 381 aa12.12□□□□□ -0.47
FARP1-240ENST00000602263 GSPT1P15170 499 aaKnown RBP12.12□□□□□ -0.47
FARP1-240ENST00000602263 WDR5P61964 334 aaKnown RBP12.12□□□□□ -0.47
FARP1-240ENST00000602263 TAP1Q03518 808 aa12.12□□□□□ -0.47
FARP1-240ENST00000602263 WTAPQ15007 396 aa12.12□□□□□ -0.47
FARP1-240ENST00000602263 PGM5Q15124 567 aa12.12□□□□□ -0.47
FARP1-240ENST00000602263 GNPTABQ3T906 1256 aa12.12□□□□□ -0.47
FARP1-240ENST00000602263 CELF3Q5SZQ8 465 aaKnown RBP12.12□□□□□ -0.47
FARP1-240ENST00000602263 STOX1Q6ZVD7 989 aa12.12□□□□□ -0.47
FARP1-240ENST00000602263 CATIPQ7Z7H3 387 aa12.12□□□□□ -0.47
FARP1-240ENST00000602263 NCOA7Q8NI08 942 aa12.12□□□□□ -0.47
FARP1-240ENST00000602263 DHX38Q92620 1227 aaKnown RBP12.12□□□□□ -0.47
FARP1-240ENST00000602263 CTAGE1Q96RT6 745 aa12.12□□□□□ -0.47
FARP1-240ENST00000602263 PIGSQ96S52 555 aa12.12□□□□□ -0.47
FARP1-240ENST00000602263 IL25Q9H293 177 aa12.12□□□□□ -0.47
FARP1-240ENST00000602263 MLXIPQ9HAP2 919 aa12.12□□□□□ -0.47
FARP1-240ENST00000602263 PNMA6FA0A0J9YX94 578 aa12.11□□□□□ -0.47
FARP1-240ENST00000602263 ABHD14A-ACY1A0A1B0GW23 586 aa12.11□□□□□ -0.47
FARP1-240ENST00000602263 HAS3O00219 553 aa12.11□□□□□ -0.47
FARP1-240ENST00000602263 RFXAPO00287 272 aa12.11□□□□□ -0.47
FARP1-240ENST00000602263 SORBS3O60504 671 aa12.11□□□□□ -0.47
FARP1-240ENST00000602263 CXCL10P02778 98 aa12.11□□□□□ -0.47
FARP1-240ENST00000602263 HOXD8P13378 290 aaPredicted RBP12.11□□□□□ -0.47
FARP1-240ENST00000602263 POU3F3P20264 500 aaPredicted RBP12.11□□□□□ -0.47
FARP1-240ENST00000602263 UBA1P22314 1058 aaKnown RBP12.11□□□□□ -0.47
FARP1-240ENST00000602263 IKBKEQ14164 716 aa12.11□□□□□ -0.47
FARP1-240ENST00000602263 MYSM1Q5VVJ2 828 aa12.11□□□□□ -0.47
FARP1-240ENST00000602263 PPP4R3CPQ6ZMV5 832 aa12.11□□□□□ -0.47
FARP1-240ENST00000602263 VSIG10LQ86VR7 867 aa12.11□□□□□ -0.47
FARP1-240ENST00000602263 FCHSD1Q86WN1 690 aa12.11□□□□□ -0.47
FARP1-240ENST00000602263 RIOX1Q9H6W3 641 aa12.11□□□□□ -0.47
FARP1-240ENST00000602263 MTCH2Q9Y6C9 303 aa12.11□□□□□ -0.47
FARP1-240ENST00000602263 EMSYQ7Z589 1322 aa12.11□□□□□ -0.47
FARP1-240ENST00000602263 NOP56O00567 594 aaKnown RBP12.1□□□□□ -0.47
FARP1-240ENST00000602263 NBNO60934 754 aa12.1□□□□□ -0.47
FARP1-240ENST00000602263 STAM2O75886 525 aa12.1□□□□□ -0.47
FARP1-240ENST00000602263 RGS20O76081 388 aa12.1□□□□□ -0.47
FARP1-240ENST00000602263 CHMLP26374 656 aa12.1□□□□□ -0.47
FARP1-240ENST00000602263 PDE4AP27815 886 aa12.1□□□□□ -0.47
FARP1-240ENST00000602263 DEFB103AP81534 67 aa12.1□□□□□ -0.47
FARP1-240ENST00000602263 HSDL1Q3SXM5 330 aa12.1□□□□□ -0.47
FARP1-240ENST00000602263 IL31RAQ8NI17 732 aa12.1□□□□□ -0.47
FARP1-240ENST00000602263 COG5Q9UP83 839 aa12.1□□□□□ -0.47
FARP1-240ENST00000602263 C17orf102A2RUQ5 167 aa12.09□□□□□ -0.47
FARP1-240ENST00000602263 EPOPA6NHQ4 379 aa12.09□□□□□ -0.47
FARP1-240ENST00000602263 E7EWF7 191 aa12.09□□□□□ -0.47
FARP1-240ENST00000602263 ARHGEF15O94989 841 aa12.09□□□□□ -0.47
FARP1-240ENST00000602263 GJB5O95377 273 aa12.09□□□□□ -0.47
FARP1-240ENST00000602263 KIF5BP33176 963 aa12.09□□□□□ -0.47
FARP1-240ENST00000602263 PTH1RQ03431 593 aa12.09□□□□□ -0.47
FARP1-240ENST00000602263 TROAPQ12815 778 aa12.09□□□□□ -0.47
FARP1-240ENST00000602263 NEDD9Q14511 834 aa12.09□□□□□ -0.47
FARP1-240ENST00000602263 ZNF618Q5T7W0 954 aa12.09□□□□□ -0.47
FARP1-240ENST00000602263 CTCFLQ8NI51 663 aaPredicted RBP12.09□□□□□ -0.47
FARP1-240ENST00000602263 CUL5Q93034 780 aa12.09□□□□□ -0.47
FARP1-240ENST00000602263 RAD9AQ99638 391 aa12.09□□□□□ -0.47
FARP1-240ENST00000602263 SEC63Q9UGP8 760 aaKnown RBP12.09□□□□□ -0.47
FARP1-240ENST00000602263 NLRC5Q86WI3 1866 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 LCHNA4D1U4 455 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 RSPH10B2B2RC85 870 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 CYTH3O43739 400 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 LGR5O75473 907 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 DDAH1O94760 285 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 AMHP03971 560 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 RSPH10BP0C881 870 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 THPOP40225 353 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 ZNF200P98182 395 aaPredicted RBP12.08□□□□□ -0.48
FARP1-240ENST00000602263 SP2Q02086 613 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 TFF2Q03403 129 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 GRB10Q13322 594 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 GPNMBQ14956 572 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 SLC35G1Q2M3R5 365 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 TRIM71Q2Q1W2 868 aaKnown RBP12.08□□□□□ -0.48
FARP1-240ENST00000602263 CASC1Q6TDU7 716 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 TMCO2Q7Z6W1 182 aaPredicted RBP12.08□□□□□ -0.48
FARP1-240ENST00000602263 SERINC5Q86VE9 423 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 SMARCC2Q8TAQ2 1214 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 PIBF1Q8WXW3 757 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 ATP6V0A1Q93050 837 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 RRP36Q96EU6 259 aaKnown RBP12.08□□□□□ -0.48
FARP1-240ENST00000602263 ZFP91Q96JP5 570 aaPredicted RBP12.08□□□□□ -0.48
FARP1-240ENST00000602263 TGS1Q96RS0 853 aaKnown RBP12.08□□□□□ -0.48
FARP1-240ENST00000602263 C16orf70Q9BSU1 422 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 SENP2Q9HC62 589 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 ZNF215Q9UL58 517 aaPredicted RBP12.08□□□□□ -0.48
FARP1-240ENST00000602263 SUPT16HQ9Y5B9 1047 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms