RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 TNS1Q9HBL0 1735 aaKnown RBP21.29■■□□□ 1
PRKCSH-209ENST00000589838 EP400Q96L91 3159 aa21.29■■□□□ 1
PRKCSH-209ENST00000589838 GH2P01242 217 aa21.28■■□□□ 1
PRKCSH-209ENST00000589838 SSBP05455 408 aaKnown RBP eCLIP21.28■■□□□ 1
PRKCSH-209ENST00000589838 PLA2G4BP0C869 781 aa21.28■■□□□ 1
PRKCSH-209ENST00000589838 SHROOM1Q2M3G4 852 aaPredicted RBP21.28■■□□□ 1
PRKCSH-209ENST00000589838 CRYGNQ8WXF5 182 aa21.28■■□□□ 1
PRKCSH-209ENST00000589838 PRMT6Q96LA8 375 aaPredicted RBP21.28■■□□□ 1
PRKCSH-209ENST00000589838 CSRNP1Q96S65 589 aa21.28■■□□□ 1
PRKCSH-209ENST00000589838 ARHGEF10LQ9HCE6 1279 aa21.28■■□□□ 1
PRKCSH-209ENST00000589838 AGPAT5Q9NUQ2 364 aa21.28■■□□□ 1
PRKCSH-209ENST00000589838 FAM53CQ9NYF3 392 aa21.28■■□□□ 1
PRKCSH-209ENST00000589838 PSME4Q14997 1843 aa21.28■■□□□ 1
PRKCSH-209ENST00000589838 RASSF10A6NK89 507 aa21.28■■□□□ 1
PRKCSH-209ENST00000589838 EIF3CLB5ME19 914 aaKnown RBP21.28■■□□□ 1
PRKCSH-209ENST00000589838 POTEB2H3BUK9 544 aa21.28■■□□□ 1
PRKCSH-209ENST00000589838 ATP8B1O43520 1251 aa21.28■■□□□ 1
PRKCSH-209ENST00000589838 CHMP4BP1P59074 171 aa21.28■■□□□ 1
PRKCSH-209ENST00000589838 FKBP3Q00688 224 aaKnown RBP21.28■■□□□ 1
PRKCSH-209ENST00000589838 WHAMMP3Q1A5X7 153 aa21.28■■□□□ 1
PRKCSH-209ENST00000589838 EEF2KMTQ96G04 330 aa21.28■■□□□ 1
PRKCSH-209ENST00000589838 FAM20AQ96MK3 541 aa21.28■■□□□ 1
PRKCSH-209ENST00000589838 EIF3CQ99613 913 aaKnown RBP21.28■■□□□ 1
PRKCSH-209ENST00000589838 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.28■■□□□ 1
PRKCSH-209ENST00000589838 KRT86O43790 486 aa21.27■■□□□ 1
PRKCSH-209ENST00000589838 GNA14O95837 355 aa21.27■■□□□ 1
PRKCSH-209ENST00000589838 RXRBP28702 533 aa21.27■■□□□ 1
PRKCSH-209ENST00000589838 SREBF1P36956 1147 aa21.27■■□□□ 1
PRKCSH-209ENST00000589838 SLC15A2Q16348 729 aa21.27■■□□□ 1
PRKCSH-209ENST00000589838 KIAA1328Q86T90 577 aa21.27■■□□□ 1
PRKCSH-209ENST00000589838 CEP63Q96MT8 703 aa21.27■■□□□ 1
PRKCSH-209ENST00000589838 EDEM3Q9BZQ6 932 aa21.27■■□□□ 1
PRKCSH-209ENST00000589838 STK32BQ9NY57 414 aa21.27■■□□□ 1
PRKCSH-209ENST00000589838 HDAC9Q9UKV0 1011 aa21.27■■□□□ 1
PRKCSH-209ENST00000589838 REXO2Q9Y3B8 237 aaKnown RBP21.27■■□□□ 1
PRKCSH-209ENST00000589838 PITPNM2Q9BZ72 1349 aa21.27■□□□□ 0.99
PRKCSH-209ENST00000589838 HNRNPH3P31942 346 aaKnown RBP21.26■□□□□ 0.99
PRKCSH-209ENST00000589838 LRRC55Q6ZSA7 311 aa21.26■□□□□ 0.99
PRKCSH-209ENST00000589838 ARHGAP27Q6ZUM4 889 aa21.26■□□□□ 0.99
PRKCSH-209ENST00000589838 GPBP1Q86WP2 473 aa21.26■□□□□ 0.99
PRKCSH-209ENST00000589838 NHEJ1Q9H9Q4 299 aaPredicted RBP21.26■□□□□ 0.99
PRKCSH-209ENST00000589838 GUCA1BQ9UMX6 200 aa21.26■□□□□ 0.99
PRKCSH-209ENST00000589838 E9PMD0 336 aa21.26■□□□□ 0.99
PRKCSH-209ENST00000589838 CIITAP33076 1130 aa21.26■□□□□ 0.99
PRKCSH-209ENST00000589838 PRR16Q569H4 304 aa21.26■□□□□ 0.99
PRKCSH-209ENST00000589838 KCTD17Q8N5Z5 321 aa21.26■□□□□ 0.99
PRKCSH-209ENST00000589838 ETNPPLQ8TBG4 499 aa21.26■□□□□ 0.99
PRKCSH-209ENST00000589838 GJA10Q969M2 543 aa21.26■□□□□ 0.99
PRKCSH-209ENST00000589838 ZNF446Q9NWS9 450 aa21.26■□□□□ 0.99
PRKCSH-209ENST00000589838 SIK3Q9Y2K2 1263 aa21.26■□□□□ 0.99
PRKCSH-209ENST00000589838 POTEB3A0JP26 581 aa21.25■□□□□ 0.99
PRKCSH-209ENST00000589838 POTECB2RU33 542 aa21.25■□□□□ 0.99
PRKCSH-209ENST00000589838 KRT18P05783 430 aaKnown RBP21.25■□□□□ 0.99
PRKCSH-209ENST00000589838 KLK7P49862 253 aa21.25■□□□□ 0.99
PRKCSH-209ENST00000589838 LRRC41Q15345 812 aa21.25■□□□□ 0.99
PRKCSH-209ENST00000589838 USH1GQ495M9 461 aa21.25■□□□□ 0.99
PRKCSH-209ENST00000589838 CCDC122Q5T0U0 273 aa21.25■□□□□ 0.99
PRKCSH-209ENST00000589838 POTEBQ6S5H4 581 aa21.25■□□□□ 0.99
PRKCSH-209ENST00000589838 COL4A3BPQ9Y5P4 624 aa21.25■□□□□ 0.99
PRKCSH-209ENST00000589838 YDJCA8MPS7 323 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 PIK3CDO00329 1044 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 PSMD14O00487 310 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 CYP3A4P08684 503 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 HERVK_113P62684 666 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 ZCWPW2Q504Y3 356 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 RSBN1LQ6PCB5 846 aaPredicted RBP21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 RTKN2Q8IZC4 609 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 JAKMIP2Q96AA8 810 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 CCDC42Q96M95 316 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 TSGA10Q9BZW7 698 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 GOPCQ9HD26 462 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 PLAGL2Q9UPG8 496 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 DNM3Q9UQ16 869 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 TRAF5O00463 557 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 CYP11B2P19099 503 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 RPA1P27694 616 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 SPA17Q15506 151 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 HERC4Q5GLZ8 1057 aaPredicted RBP21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 PPP4R3CPQ6ZMV5 832 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 FAM151AQ8WW52 585 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 MMRN2Q9H8L6 949 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 PRR12Q9ULL5 1215 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 MYO6Q9UM54 1294 aa21.24■□□□□ 0.99
PRKCSH-209ENST00000589838 SPDYE2BA6NHP3 402 aa21.23■□□□□ 0.99
PRKCSH-209ENST00000589838 MED24O75448 989 aa21.23■□□□□ 0.99
PRKCSH-209ENST00000589838 ZRANB2O95218 330 aaKnown RBP eCLIP21.23■□□□□ 0.99
PRKCSH-209ENST00000589838 SPDYE6P0CI01 402 aa21.23■□□□□ 0.99
PRKCSH-209ENST00000589838 STAT2P52630 851 aa21.23■□□□□ 0.99
PRKCSH-209ENST00000589838 SNAP25P60880 206 aa21.23■□□□□ 0.99
PRKCSH-209ENST00000589838 DLGAP5Q15398 846 aa21.23■□□□□ 0.99
PRKCSH-209ENST00000589838 CCDC40Q4G0X9 1142 aa21.23■□□□□ 0.99
PRKCSH-209ENST00000589838 NEK11Q8NG66 645 aa21.23■□□□□ 0.99
PRKCSH-209ENST00000589838 FRMD3A2A2Y4 597 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 C21orf2O43822 256 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 ABL1P00519 1130 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 ZNF76P36508 570 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 SLC12A3P55017 1021 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 GABPB1Q06547 395 aaPredicted RBP21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 SPIRE1Q08AE8 756 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 BRD3Q15059 726 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms