RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 SPECC1Q5M775 1068 aa11.91□□□□□ -0.5
NEDD4L-224ENST00000588712 HAUS3Q68CZ6 603 aa11.91□□□□□ -0.5
NEDD4L-224ENST00000588712 KRBA2Q6ZNG9 492 aa11.91□□□□□ -0.5
NEDD4L-224ENST00000588712 LENG9Q96B70 501 aa11.91□□□□□ -0.5
NEDD4L-224ENST00000588712 GPRASP2Q96D09 838 aa11.91□□□□□ -0.5
NEDD4L-224ENST00000588712 ZNF577Q9BSK1 485 aa11.91□□□□□ -0.5
NEDD4L-224ENST00000588712 NT5C3AQ9H0P0 336 aa11.91□□□□□ -0.5
NEDD4L-224ENST00000588712 ZFYVE28Q9HCC9 887 aa11.91□□□□□ -0.5
NEDD4L-224ENST00000588712 TBC1D22BQ9NU19 505 aa11.91□□□□□ -0.5
NEDD4L-224ENST00000588712 IVNS1ABPQ9Y6Y0 642 aa11.91□□□□□ -0.5
NEDD4L-224ENST00000588712 KDM3AQ9Y4C1 1321 aa11.9□□□□□ -0.5
NEDD4L-224ENST00000588712 EIF3JO75822 258 aaKnown RBP11.9□□□□□ -0.5
NEDD4L-224ENST00000588712 MYL1P05976 194 aa11.9□□□□□ -0.5
NEDD4L-224ENST00000588712 MTMR1Q13613 665 aa11.9□□□□□ -0.5
NEDD4L-224ENST00000588712 GSE1Q14687 1217 aa11.9□□□□□ -0.5
NEDD4L-224ENST00000588712 TAF1CQ15572 869 aaPredicted RBP11.9□□□□□ -0.5
NEDD4L-224ENST00000588712 DEFB115Q30KQ5 88 aa11.9□□□□□ -0.5
NEDD4L-224ENST00000588712 RRAGBQ5VZM2 374 aa11.9□□□□□ -0.5
NEDD4L-224ENST00000588712 RBM43Q6ZSC3 357 aaKnown RBP11.9□□□□□ -0.5
NEDD4L-224ENST00000588712 CABP7Q86V35 215 aa11.9□□□□□ -0.5
NEDD4L-224ENST00000588712 ZNF784Q8NCA9 323 aaPredicted RBP11.9□□□□□ -0.5
NEDD4L-224ENST00000588712 SLC5A5Q92911 643 aa11.9□□□□□ -0.5
NEDD4L-224ENST00000588712 CDK5RAP3Q96JB5 506 aa11.9□□□□□ -0.5
NEDD4L-224ENST00000588712 SLC5A4Q9NY91 659 aa11.9□□□□□ -0.5
NEDD4L-224ENST00000588712 TCEAL9Q9UHQ7 104 aa11.9□□□□□ -0.5
NEDD4L-224ENST00000588712 SYCE3A1L190 88 aa11.9□□□□□ -0.51
NEDD4L-224ENST00000588712 CAVIN2O95810 425 aa11.9□□□□□ -0.51
NEDD4L-224ENST00000588712 MYCLP12524 364 aaPredicted RBP11.9□□□□□ -0.51
NEDD4L-224ENST00000588712 APLP1P51693 650 aa11.9□□□□□ -0.51
NEDD4L-224ENST00000588712 CAMK4Q16566 473 aa11.9□□□□□ -0.51
NEDD4L-224ENST00000588712 SASS6Q6UVJ0 657 aa11.9□□□□□ -0.51
NEDD4L-224ENST00000588712 LRSAM1Q6UWE0 723 aa11.9□□□□□ -0.51
NEDD4L-224ENST00000588712 FAM133AQ8N9E0 248 aa11.9□□□□□ -0.51
NEDD4L-224ENST00000588712 LRRC27Q9C0I9 530 aa11.9□□□□□ -0.51
NEDD4L-224ENST00000588712 DISC1Q9NRI5 854 aa11.9□□□□□ -0.51
NEDD4L-224ENST00000588712 KCNH7Q9NS40 1196 aa11.9□□□□□ -0.51
NEDD4L-224ENST00000588712 IPO5O00410 1097 aaKnown RBP11.89□□□□□ -0.51
NEDD4L-224ENST00000588712 GAS7O60861 476 aa11.89□□□□□ -0.51
NEDD4L-224ENST00000588712 CCDC192P0DO97 292 aa11.89□□□□□ -0.51
NEDD4L-224ENST00000588712 ITGB5P18084 799 aa11.89□□□□□ -0.51
NEDD4L-224ENST00000588712 MUTP22033 750 aa11.89□□□□□ -0.51
NEDD4L-224ENST00000588712 STAT6P42226 847 aa11.89□□□□□ -0.51
NEDD4L-224ENST00000588712 UBXN2AP68543 259 aa11.89□□□□□ -0.51
NEDD4L-224ENST00000588712 MRPS9P82933 396 aaKnown RBP11.89□□□□□ -0.51
NEDD4L-224ENST00000588712 AMPD3Q01432 767 aa11.89□□□□□ -0.51
NEDD4L-224ENST00000588712 LONRF3Q496Y0 759 aa11.89□□□□□ -0.51
NEDD4L-224ENST00000588712 WDR78Q5VTH9 848 aa11.89□□□□□ -0.51
NEDD4L-224ENST00000588712 LRCH2Q5VUJ6 765 aa11.89□□□□□ -0.51
NEDD4L-224ENST00000588712 KCNV1Q6PIU1 500 aa11.89□□□□□ -0.51
NEDD4L-224ENST00000588712 PAXIP1Q6ZW49 1069 aaPredicted RBP11.89□□□□□ -0.51
NEDD4L-224ENST00000588712 INPP4AQ96PE3 977 aaPredicted RBP11.89□□□□□ -0.51
NEDD4L-224ENST00000588712 TEKT3Q9BXF9 490 aa11.89□□□□□ -0.51
NEDD4L-224ENST00000588712 STK17AQ9UEE5 414 aa11.89□□□□□ -0.51
NEDD4L-224ENST00000588712 ASB14A6NK59 587 aa11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 RASSF10A6NK89 507 aa11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 IGF2BP3O00425 579 aaKnown RBP eCLIP11.88□□□□□ -0.514e-7■■□□□ 12.1
NEDD4L-224ENST00000588712 TLR2O60603 784 aa11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 SMC2O95347 1197 aa11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 ALDH5A1P51649 535 aaPredicted RBP11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 PDE4DQ08499 809 aa11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 SEMA3FQ13275 785 aa11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 PPP2R5CQ13362 524 aa11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 USP49Q70CQ1 688 aa11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 PDILTQ8N807 584 aa11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 GIMAP8Q8ND71 665 aaPredicted RBP11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 CYP2W1Q8TAV3 490 aa11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 DHX58Q96C10 678 aa11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 DIS3Q9Y2L1 958 aaKnown RBP11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 DNAJC25-GNG10A0A024R161 153 aa11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 PSMD10O75832 226 aa11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 TGFB3P10600 412 aa11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 OTOP1Q7RTM1 612 aa11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 NEK9Q8TD19 979 aa11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 SNX29Q8TEQ0 813 aa11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 PANK2Q9BZ23 570 aa11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 AGO4Q9HCK5 861 aaKnown RBP11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 KIAA1468Q9P260 1216 aa11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 SERTAD1Q9UHV2 236 aa11.88□□□□□ -0.51
NEDD4L-224ENST00000588712 ACTN4O43707 911 aaKnown RBP11.87□□□□□ -0.51
NEDD4L-224ENST00000588712 EDNRBP24530 442 aa11.87□□□□□ -0.51
NEDD4L-224ENST00000588712 ICAM3P32942 547 aa11.87□□□□□ -0.51
NEDD4L-224ENST00000588712 E2F4Q16254 413 aa11.87□□□□□ -0.51
NEDD4L-224ENST00000588712 HYIQ5T013 277 aa11.87□□□□□ -0.51
NEDD4L-224ENST00000588712 PLEKHH3Q7Z736 793 aa11.87□□□□□ -0.51
NEDD4L-224ENST00000588712 ZNF467Q7Z7K2 595 aaPredicted RBP11.87□□□□□ -0.51
NEDD4L-224ENST00000588712 POLR3CQ9BUI4 534 aaPredicted RBP11.87□□□□□ -0.51
NEDD4L-224ENST00000588712 GTPBP4Q9BZE4 634 aaKnown RBP11.87□□□□□ -0.51
NEDD4L-224ENST00000588712 EFCC1Q9HA90 598 aa11.87□□□□□ -0.51
NEDD4L-224ENST00000588712 POTEMA6NI47 508 aa11.87□□□□□ -0.51
NEDD4L-224ENST00000588712 SLC15A5A6NIM6 579 aa11.87□□□□□ -0.51
NEDD4L-224ENST00000588712 SPATA31C2B4DYI2 1134 aa11.87□□□□□ -0.51
NEDD4L-224ENST00000588712 CA12O43570 354 aa11.87□□□□□ -0.51
NEDD4L-224ENST00000588712 ARP10275 920 aa11.87□□□□□ -0.51
NEDD4L-224ENST00000588712 RPA1P27694 616 aa11.87□□□□□ -0.51
NEDD4L-224ENST00000588712 SFNP31947 248 aa11.87□□□□□ -0.51
NEDD4L-224ENST00000588712 KRT76Q01546 638 aa11.87□□□□□ -0.51
NEDD4L-224ENST00000588712 CNTN2Q02246 1040 aa11.87□□□□□ -0.51
NEDD4L-224ENST00000588712 KARSQ15046 597 aaKnown RBP11.87□□□□□ -0.51
NEDD4L-224ENST00000588712 POSTNQ15063 836 aa11.87□□□□□ -0.51
NEDD4L-224ENST00000588712 MSL3Q8N5Y2 521 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms