RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 C6orf50Q9HD87 102 aa18.4■□□□□ 0.54
RETREG3-206ENST00000588423 COLQQ9Y215 455 aaPredicted RBP18.4■□□□□ 0.54
RETREG3-206ENST00000588423 CDKL5O76039 1030 aa18.39■□□□□ 0.53
RETREG3-206ENST00000588423 DEXIO95424 95 aa18.39■□□□□ 0.53
RETREG3-206ENST00000588423 MYL3P08590 195 aa18.39■□□□□ 0.53
RETREG3-206ENST00000588423 UBA1P22314 1058 aaKnown RBP18.39■□□□□ 0.53
RETREG3-206ENST00000588423 GNA11P29992 359 aa18.39■□□□□ 0.53
RETREG3-206ENST00000588423 NEK4P51957 841 aa18.39■□□□□ 0.53
RETREG3-206ENST00000588423 SP2Q02086 613 aa18.39■□□□□ 0.53
RETREG3-206ENST00000588423 FAAP100Q0VG06 881 aa18.39■□□□□ 0.53
RETREG3-206ENST00000588423 SCRN1Q12765 414 aa18.39■□□□□ 0.53
RETREG3-206ENST00000588423 MYSM1Q5VVJ2 828 aa18.39■□□□□ 0.53
RETREG3-206ENST00000588423 FAM126BQ8IXS8 530 aa18.39■□□□□ 0.53
RETREG3-206ENST00000588423 GPRASP2Q96D09 838 aa18.39■□□□□ 0.53
RETREG3-206ENST00000588423 CDHR1Q96JP9 859 aa18.39■□□□□ 0.53
RETREG3-206ENST00000588423 SENP7Q9BQF6 1050 aa18.39■□□□□ 0.53
RETREG3-206ENST00000588423 RTEL1Q9NZ71 1219 aa18.39■□□□□ 0.53
RETREG3-206ENST00000588423 GRIN2DO15399 1336 aa18.39■□□□□ 0.53
RETREG3-206ENST00000588423 A0A1W2PPC1 479 aa18.38■□□□□ 0.53
RETREG3-206ENST00000588423 KIAA0355O15063 1070 aa18.38■□□□□ 0.53
RETREG3-206ENST00000588423 TLR3O15455 904 aaKnown RBP18.38■□□□□ 0.53
RETREG3-206ENST00000588423 MAFGO15525 162 aa18.38■□□□□ 0.53
RETREG3-206ENST00000588423 GGPS1O95749 300 aa18.38■□□□□ 0.53
RETREG3-206ENST00000588423 HOXD8P13378 290 aaPredicted RBP18.38■□□□□ 0.53
RETREG3-206ENST00000588423 MAGEA10P43363 369 aaPredicted RBP18.38■□□□□ 0.53
RETREG3-206ENST00000588423 RBM25P49756 843 aaKnown RBP18.38■□□□□ 0.53
RETREG3-206ENST00000588423 SEMA3FQ13275 785 aa18.38■□□□□ 0.53
RETREG3-206ENST00000588423 NEDD9Q14511 834 aa18.38■□□□□ 0.53
RETREG3-206ENST00000588423 DGKDQ16760 1214 aa18.38■□□□□ 0.53
RETREG3-206ENST00000588423 BICD2Q8TD16 824 aa18.38■□□□□ 0.53
RETREG3-206ENST00000588423 ZFP91Q96JP5 570 aaPredicted RBP18.38■□□□□ 0.53
RETREG3-206ENST00000588423 ANO3Q9BYT9 981 aa18.38■□□□□ 0.53
RETREG3-206ENST00000588423 UBIAD1Q9Y5Z9 338 aa18.38■□□□□ 0.53
RETREG3-206ENST00000588423 DNAH12Q6ZR08 3092 aa18.37■□□□□ 0.53
RETREG3-206ENST00000588423 TRIM43BA6NCK2 446 aa18.37■□□□□ 0.53
RETREG3-206ENST00000588423 CD4P01730 458 aa18.37■□□□□ 0.53
RETREG3-206ENST00000588423 ITGB5P18084 799 aa18.37■□□□□ 0.53
RETREG3-206ENST00000588423 SREBF1P36956 1147 aa18.37■□□□□ 0.53
RETREG3-206ENST00000588423 GIMAP8Q8ND71 665 aaPredicted RBP18.37■□□□□ 0.53
RETREG3-206ENST00000588423 TRIM43Q96BQ3 446 aaPredicted RBP18.37■□□□□ 0.53
RETREG3-206ENST00000588423 SPATA33Q96N06 139 aa18.37■□□□□ 0.53
RETREG3-206ENST00000588423 C22orf23Q9BZE7 217 aa18.37■□□□□ 0.53
RETREG3-206ENST00000588423 MLXIPQ9HAP2 919 aa18.37■□□□□ 0.53
RETREG3-206ENST00000588423 PRDM5Q9NQX1 630 aaPredicted RBP18.37■□□□□ 0.53
RETREG3-206ENST00000588423 PPFIA4O75335 1185 aa18.36■□□□□ 0.53
RETREG3-206ENST00000588423 PSMC6P62333 389 aa18.36■□□□□ 0.53
RETREG3-206ENST00000588423 PTPN11Q06124 597 aaPredicted RBP18.36■□□□□ 0.53
RETREG3-206ENST00000588423 HSDL1Q3SXM5 330 aa18.36■□□□□ 0.53
RETREG3-206ENST00000588423 NFRKBQ6P4R8 1299 aa18.36■□□□□ 0.53
RETREG3-206ENST00000588423 METTL7BQ6UX53 244 aa18.36■□□□□ 0.53
RETREG3-206ENST00000588423 SH3RF1Q7Z6J0 888 aa18.36■□□□□ 0.53
RETREG3-206ENST00000588423 REXO1Q8N1G1 1221 aaKnown RBP18.36■□□□□ 0.53
RETREG3-206ENST00000588423 LBHD1Q9BQE6 289 aaPredicted RBP18.36■□□□□ 0.53
RETREG3-206ENST00000588423 JADE2Q9NQC1 790 aa18.36■□□□□ 0.53
RETREG3-206ENST00000588423 STK36Q9NRP7 1315 aa18.36■□□□□ 0.53
RETREG3-206ENST00000588423 TMEM39AQ9NV64 488 aa18.36■□□□□ 0.53
RETREG3-206ENST00000588423 VPS54Q9P1Q0 977 aa18.36■□□□□ 0.53
RETREG3-206ENST00000588423 TBX21Q9UL17 535 aa18.36■□□□□ 0.53
RETREG3-206ENST00000588423 PPFIA3O75145 1194 aa18.35■□□□□ 0.53
RETREG3-206ENST00000588423 MTMR1Q13613 665 aa18.35■□□□□ 0.53
RETREG3-206ENST00000588423 ME3Q16798 604 aa18.35■□□□□ 0.53
RETREG3-206ENST00000588423 HABP4Q5JVS0 413 aaKnown RBP18.35■□□□□ 0.53
RETREG3-206ENST00000588423 IL27Q8NEV9 243 aa18.35■□□□□ 0.53
RETREG3-206ENST00000588423 KIF2CQ99661 725 aa18.35■□□□□ 0.53
RETREG3-206ENST00000588423 MXRA8Q9BRK3 442 aa18.35■□□□□ 0.53
RETREG3-206ENST00000588423 KATNAL1Q9BW62 490 aa18.35■□□□□ 0.53
RETREG3-206ENST00000588423 TMEM260Q9NX78 707 aa18.35■□□□□ 0.53
RETREG3-206ENST00000588423 LTBP2Q14767 1821 aa18.35■□□□□ 0.53
RETREG3-206ENST00000588423 F2P00734 622 aa18.34■□□□□ 0.53
RETREG3-206ENST00000588423 CYP3A4P08684 503 aa18.34■□□□□ 0.53
RETREG3-206ENST00000588423 MDM2Q00987 491 aaPredicted RBP18.34■□□□□ 0.53
RETREG3-206ENST00000588423 NBPF20Q3BBV1 942 aa18.34■□□□□ 0.53
RETREG3-206ENST00000588423 JAKMIP3Q5VZ66 844 aa18.34■□□□□ 0.53
RETREG3-206ENST00000588423 GALNT17Q6IS24 598 aa18.34■□□□□ 0.53
RETREG3-206ENST00000588423 NIPA1Q7RTP0 329 aa18.34■□□□□ 0.53
RETREG3-206ENST00000588423 SESTD1Q86VW0 696 aa18.34■□□□□ 0.53
RETREG3-206ENST00000588423 CRYGNQ8WXF5 182 aa18.34■□□□□ 0.53
RETREG3-206ENST00000588423 KAT2BQ92831 832 aa18.34■□□□□ 0.53
RETREG3-206ENST00000588423 GTF3C6Q969F1 213 aa18.34■□□□□ 0.53
RETREG3-206ENST00000588423 PGBD1Q96JS3 809 aa18.34■□□□□ 0.53
RETREG3-206ENST00000588423 UPF2Q9HAU5 1272 aaKnown RBP18.34■□□□□ 0.53
RETREG3-206ENST00000588423 SCN10AQ9Y5Y9 1956 aa18.33■□□□□ 0.53
RETREG3-206ENST00000588423 B4GALT4O60513 344 aa18.33■□□□□ 0.52
RETREG3-206ENST00000588423 SUPT20HL2P0C7V6 817 aa18.33■□□□□ 0.52
RETREG3-206ENST00000588423 RAG1P15918 1043 aa18.33■□□□□ 0.52
RETREG3-206ENST00000588423 KCNA2P16389 499 aa18.33■□□□□ 0.52
RETREG3-206ENST00000588423 NLRP5P59047 1200 aa18.33■□□□□ 0.52
RETREG3-206ENST00000588423 ARHGAP4P98171 946 aa18.33■□□□□ 0.52
RETREG3-206ENST00000588423 CEP55Q53EZ4 464 aa18.33■□□□□ 0.52
RETREG3-206ENST00000588423 CYFIP1Q7L576 1253 aa18.33■□□□□ 0.52
RETREG3-206ENST00000588423 DAGLBQ8NCG7 672 aa18.33■□□□□ 0.52
RETREG3-206ENST00000588423 UBE2OQ9C0C9 1292 aaKnown RBP18.33■□□□□ 0.52
RETREG3-206ENST00000588423 HAS3O00219 553 aa18.32■□□□□ 0.52
RETREG3-206ENST00000588423 MEIS1O00470 390 aa18.32■□□□□ 0.52
RETREG3-206ENST00000588423 NOP56O00567 594 aaKnown RBP18.32■□□□□ 0.52
RETREG3-206ENST00000588423 LARGE1O95461 756 aa18.32■□□□□ 0.52
RETREG3-206ENST00000588423 CTDNEP1O95476 244 aa18.32■□□□□ 0.52
RETREG3-206ENST00000588423 TIMP1P01033 207 aa18.32■□□□□ 0.52
RETREG3-206ENST00000588423 ITGB8P26012 769 aa18.32■□□□□ 0.52
RETREG3-206ENST00000588423 WASF1Q92558 559 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms