RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 CBARPQ8N350 705 aaPredicted RBP6.27□□□□□ -1.41
LINC01538-201ENST00000588074 UHMK1Q8TAS1 419 aaKnown RBP6.27□□□□□ -1.41
LINC01538-201ENST00000588074 SLC7A14Q8TBB6 771 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 LRGUKQ96M69 825 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 TRIM39Q9HCM9 518 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 UBAP1Q9NZ09 502 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 TNPO3Q9Y5L0 923 aaKnown RBP6.27□□□□□ -1.41
LINC01538-201ENST00000588074 IFT140Q96RY7 1462 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 KLRG2A4D1S0 409 aaPredicted RBP6.27□□□□□ -1.41
LINC01538-201ENST00000588074 TRIM64CA6NLI5 447 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 TMEM232C9JQI7 657 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 IDO1P14902 403 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 ITPKAP23677 461 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 CA8P35219 290 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 TUBB8Q3ZCM7 444 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 UNC5AQ6ZN44 842 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 BICDL1Q6ZP65 573 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 TMC6Q7Z403 805 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 RSPH3Q86UC2 560 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 CPXCR1Q8N123 301 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 ZSCAN1Q8NBB4 408 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 PPP1R14BQ96C90 147 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 NLRP3Q96P20 1036 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 CAMKK2Q96RR4 588 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 CDC6Q99741 560 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 LRRCC1Q9C099 1032 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 SAGE1Q9NXZ1 904 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 TMED5Q9Y3A6 229 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 PCDHGB3Q9Y5G1 929 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 BIVM-ERCC5R4GMW8 1640 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 KIF15Q9NS87 1388 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 M0R2C6 588 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 SRGAP3O43295 1099 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 ZEB2O60315 1214 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 MMP20O60882 483 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 SELPP16109 830 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 MCM3P25205 808 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 TARSP26639 723 aaKnown RBP6.26□□□□□ -1.41
LINC01538-201ENST00000588074 PTGIRP43119 386 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 PTPN14Q15678 1187 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 CCDC152Q4G0S7 254 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 ARHGAP29Q52LW3 1261 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 RC3H1Q5TC82 1133 aaKnown RBP6.26□□□□□ -1.41
LINC01538-201ENST00000588074 MIS18BP1Q6P0N0 1132 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.26□□□□□ -1.41
LINC01538-201ENST00000588074 CCDC84Q86UT8 332 aaPredicted RBP6.26□□□□□ -1.41
LINC01538-201ENST00000588074 GALNT15Q8N3T1 639 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 ENAHQ8N8S7 591 aaPredicted RBP6.26□□□□□ -1.41
LINC01538-201ENST00000588074 TEX19Q8NA77 164 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 TRIM58Q8NG06 486 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 FBXO41Q8TF61 875 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 TRMT2BQ96GJ1 504 aaKnown RBP6.26□□□□□ -1.41
LINC01538-201ENST00000588074 MPP4Q96JB8 637 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 UIMC1Q96RL1 719 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 ELAC2Q9BQ52 826 aaKnown RBP6.26□□□□□ -1.41
LINC01538-201ENST00000588074 SLC39A3Q9BRY0 314 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 VTA1Q9NP79 307 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 PLCB1Q9NQ66 1216 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 PAPOLBQ9NRJ5 636 aaKnown RBP6.26□□□□□ -1.41
LINC01538-201ENST00000588074 FAM86C1Q9NVL1 165 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 ORC3Q9UBD5 711 aaPredicted RBP6.26□□□□□ -1.41
LINC01538-201ENST00000588074 CROTQ9UKG9 612 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 GOLGA8AA7E2F4 631 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 TMEM110-MUSTN1A8MSY1 372 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 PMM2O15305 246 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 SIAH2O43255 324 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 CAVIN2O95810 425 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 RPSAP08865 295 aaKnown RBP6.26□□□□□ -1.41
LINC01538-201ENST00000588074 PF4V1P10720 104 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 RPL17P18621 184 aaKnown RBP6.26□□□□□ -1.41
LINC01538-201ENST00000588074 SARSP49591 514 aaKnown RBP6.26□□□□□ -1.41
LINC01538-201ENST00000588074 PPM1FP49593 454 aaPredicted RBP6.26□□□□□ -1.41
LINC01538-201ENST00000588074 NEK4P51957 841 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 BLMP54132 1417 aaPredicted RBP6.26□□□□□ -1.41
LINC01538-201ENST00000588074 RCN1Q15293 331 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 CNGA3Q16281 694 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 CEP85LQ5SZL2 805 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 THEMIS2Q5TEJ8 643 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 RPAP2Q8IXW5 612 aaPredicted RBP6.26□□□□□ -1.41
LINC01538-201ENST00000588074 WHAMMQ8TF30 809 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 RPAP3Q9H6T3 665 aaPredicted RBP6.26□□□□□ -1.41
LINC01538-201ENST00000588074 CD248Q9HCU0 757 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 ZCCHC17Q9NP64 241 aaKnown RBP6.26□□□□□ -1.41
LINC01538-201ENST00000588074 INTS7Q9NVH2 962 aaKnown RBP6.26□□□□□ -1.41
LINC01538-201ENST00000588074 MKS1Q9NXB0 559 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 TUBGCP4Q9UGJ1 667 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 PHF24Q9UPV7 400 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 CORINQ9Y5Q5 1042 aa6.26□□□□□ -1.41
LINC01538-201ENST00000588074 EBAG9O00559 213 aa6.25□□□□□ -1.41
LINC01538-201ENST00000588074 RNASEH2AO75792 299 aaKnown RBP6.25□□□□□ -1.41
LINC01538-201ENST00000588074 MBD4O95243 580 aa6.25□□□□□ -1.41
LINC01538-201ENST00000588074 PENKP01210 267 aaPredicted RBP6.25□□□□□ -1.41
LINC01538-201ENST00000588074 ARAFP10398 606 aa6.25□□□□□ -1.41
LINC01538-201ENST00000588074 FNTAP49354 379 aa6.25□□□□□ -1.41
LINC01538-201ENST00000588074 PHEXP78562 749 aa6.25□□□□□ -1.41
LINC01538-201ENST00000588074 GPSM2P81274 684 aa6.25□□□□□ -1.41
LINC01538-201ENST00000588074 BTG3Q14201 252 aaPredicted RBP6.25□□□□□ -1.41
LINC01538-201ENST00000588074 ERCC6LQ2NKX8 1250 aa6.25□□□□□ -1.41
LINC01538-201ENST00000588074 CYB5RLQ6IPT4 315 aa6.25□□□□□ -1.41
LINC01538-201ENST00000588074 CC2D1AQ6P1N0 951 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms