RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 MYSM1Q5VVJ2 828 aa16.27■□□□□ 0.2
HDAC5-203ENST00000586339 CASC1Q6TDU7 716 aa16.27■□□□□ 0.2
HDAC5-203ENST00000586339 C7orf31Q8N865 590 aa16.27■□□□□ 0.2
HDAC5-203ENST00000586339 USP38Q8NB14 1042 aa16.27■□□□□ 0.2
HDAC5-203ENST00000586339 IL31RAQ8NI17 732 aa16.27■□□□□ 0.2
HDAC5-203ENST00000586339 CTCFLQ8NI51 663 aaPredicted RBP16.27■□□□□ 0.2
HDAC5-203ENST00000586339 PPP1R13LQ8WUF5 828 aa16.27■□□□□ 0.2
HDAC5-203ENST00000586339 LY9Q9HBG7 655 aa16.27■□□□□ 0.2
HDAC5-203ENST00000586339 REV3LO60673 3130 aa16.26■□□□□ 0.19
HDAC5-203ENST00000586339 MUC3AQ02505 3323 aa16.26■□□□□ 0.19
HDAC5-203ENST00000586339 GGPS1O95749 300 aa16.26■□□□□ 0.19
HDAC5-203ENST00000586339 SELPP16109 830 aa16.26■□□□□ 0.19
HDAC5-203ENST00000586339 UBA1P22314 1058 aaKnown RBP16.26■□□□□ 0.19
HDAC5-203ENST00000586339 MFSD10Q14728 455 aa16.26■□□□□ 0.19
HDAC5-203ENST00000586339 GNPTABQ3T906 1256 aa16.26■□□□□ 0.19
HDAC5-203ENST00000586339 LRRC8DQ7L1W4 858 aa16.26■□□□□ 0.19
HDAC5-203ENST00000586339 FCHSD1Q86WN1 690 aa16.26■□□□□ 0.19
HDAC5-203ENST00000586339 ZNF654Q8IZM8 581 aa16.26■□□□□ 0.19
HDAC5-203ENST00000586339 TMTC2Q8N394 836 aa16.26■□□□□ 0.19
HDAC5-203ENST00000586339 DHX38Q92620 1227 aaKnown RBP16.26■□□□□ 0.19
HDAC5-203ENST00000586339 TMEM87BQ96K49 555 aa16.26■□□□□ 0.19
HDAC5-203ENST00000586339 SPATA33Q96N06 139 aa16.26■□□□□ 0.19
HDAC5-203ENST00000586339 LZTS2Q9BRK4 669 aa16.26■□□□□ 0.19
HDAC5-203ENST00000586339 FTOQ9C0B1 505 aaKnown RBP eCLIP16.26■□□□□ 0.19
HDAC5-203ENST00000586339 HDAC6Q9UBN7 1215 aa16.26■□□□□ 0.19
HDAC5-203ENST00000586339 BRWD1Q9NSI6 2320 aa16.26■□□□□ 0.19
HDAC5-203ENST00000586339 ZNF286BP0CG31 522 aa16.25■□□□□ 0.19
HDAC5-203ENST00000586339 MCM5P33992 734 aa16.25■□□□□ 0.19
HDAC5-203ENST00000586339 GNAQP50148 359 aa16.25■□□□□ 0.19
HDAC5-203ENST00000586339 PTK7Q13308 1070 aa16.25■□□□□ 0.19
HDAC5-203ENST00000586339 ADGRE1Q14246 886 aa16.25■□□□□ 0.19
HDAC5-203ENST00000586339 KIAA0753Q2KHM9 967 aa16.25■□□□□ 0.19
HDAC5-203ENST00000586339 HSDL1Q3SXM5 330 aa16.25■□□□□ 0.19
HDAC5-203ENST00000586339 RRP36Q96EU6 259 aaKnown RBP16.25■□□□□ 0.19
HDAC5-203ENST00000586339 INPP4AQ96PE3 977 aaPredicted RBP16.25■□□□□ 0.19
HDAC5-203ENST00000586339 LSG1Q9H089 658 aaKnown RBP16.25■□□□□ 0.19
HDAC5-203ENST00000586339 KIF28PB7ZC32 967 aa16.24■□□□□ 0.19
HDAC5-203ENST00000586339 PRC1O43663 620 aa16.24■□□□□ 0.19
HDAC5-203ENST00000586339 CXCL10P02778 98 aa16.24■□□□□ 0.19
HDAC5-203ENST00000586339 CALM1P0DP23 149 aa16.24■□□□□ 0.19
HDAC5-203ENST00000586339 CALM2P0DP24 149 aa16.24■□□□□ 0.19
HDAC5-203ENST00000586339 CALM3P0DP25 149 aa16.24■□□□□ 0.19
HDAC5-203ENST00000586339 CKBP12277 381 aa16.24■□□□□ 0.19
HDAC5-203ENST00000586339 ICAM3P32942 547 aa16.24■□□□□ 0.19
HDAC5-203ENST00000586339 TJAP1Q5JTD0 557 aa16.24■□□□□ 0.19
HDAC5-203ENST00000586339 XRRA1Q6P2D8 792 aa16.24■□□□□ 0.19
HDAC5-203ENST00000586339 CNKSR3Q6P9H4 555 aa16.24■□□□□ 0.19
HDAC5-203ENST00000586339 ALG1Q9BT22 464 aa16.24■□□□□ 0.19
HDAC5-203ENST00000586339 SEC63Q9UGP8 760 aaKnown RBP16.24■□□□□ 0.19
HDAC5-203ENST00000586339 PIK3CDO00329 1044 aa16.23■□□□□ 0.19
HDAC5-203ENST00000586339 SH2B2O14492 632 aaPredicted RBP16.23■□□□□ 0.19
HDAC5-203ENST00000586339 EFCAB14O75071 495 aa16.23■□□□□ 0.19
HDAC5-203ENST00000586339 CA3P07451 260 aa16.23■□□□□ 0.19
HDAC5-203ENST00000586339 MYOGP15173 224 aa16.23■□□□□ 0.19
HDAC5-203ENST00000586339 IGFBP4P22692 258 aa16.23■□□□□ 0.19
HDAC5-203ENST00000586339 LIFRP42702 1097 aa16.23■□□□□ 0.19
HDAC5-203ENST00000586339 KCNJ6P48051 423 aa16.23■□□□□ 0.19
HDAC5-203ENST00000586339 SP2Q02086 613 aa16.23■□□□□ 0.19
HDAC5-203ENST00000586339 NEDD9Q14511 834 aa16.23■□□□□ 0.19
HDAC5-203ENST00000586339 METTL7BQ6UX53 244 aa16.23■□□□□ 0.19
HDAC5-203ENST00000586339 HERC6Q8IVU3 1022 aa16.23■□□□□ 0.19
HDAC5-203ENST00000586339 ATXN2LQ8WWM7 1075 aaKnown RBP16.23■□□□□ 0.19
HDAC5-203ENST00000586339 CUL5Q93034 780 aa16.23■□□□□ 0.19
HDAC5-203ENST00000586339 ESYT1Q9BSJ8 1104 aa16.23■□□□□ 0.19
HDAC5-203ENST00000586339 C16orf70Q9BSU1 422 aa16.23■□□□□ 0.19
HDAC5-203ENST00000586339 MLXIPQ9HAP2 919 aa16.23■□□□□ 0.19
HDAC5-203ENST00000586339 THEGQ9P2T0 379 aa16.23■□□□□ 0.19
HDAC5-203ENST00000586339 SIP14410 1827 aa16.23■□□□□ 0.19
HDAC5-203ENST00000586339 COL4A4P53420 1690 aaPredicted RBP16.23■□□□□ 0.19
HDAC5-203ENST00000586339 BDP1A6H8Y1 2624 aa16.23■□□□□ 0.19
HDAC5-203ENST00000586339 CCDC69A6NI79 296 aa16.22■□□□□ 0.19
HDAC5-203ENST00000586339 FIBPO43427 364 aa16.22■□□□□ 0.19
HDAC5-203ENST00000586339 HOXC8P31273 242 aa16.22■□□□□ 0.19
HDAC5-203ENST00000586339 MRPS9P82933 396 aaKnown RBP16.22■□□□□ 0.19
HDAC5-203ENST00000586339 GPNMBQ14956 572 aa16.22■□□□□ 0.19
HDAC5-203ENST00000586339 TRIM71Q2Q1W2 868 aaKnown RBP16.22■□□□□ 0.19
HDAC5-203ENST00000586339 PCNX4Q63HM2 1172 aa16.22■□□□□ 0.19
HDAC5-203ENST00000586339 EMSYQ7Z589 1322 aa16.21■□□□□ 0.19
HDAC5-203ENST00000586339 ABHD14A-ACY1A0A1B0GW23 586 aa16.21■□□□□ 0.19
HDAC5-203ENST00000586339 SPATA31C2B4DYI2 1134 aa16.21■□□□□ 0.19
HDAC5-203ENST00000586339 NOP56O00567 594 aaKnown RBP16.21■□□□□ 0.19
HDAC5-203ENST00000586339 SLC27A2O14975 620 aa16.21■□□□□ 0.19
HDAC5-203ENST00000586339 POU3F3P20264 500 aaPredicted RBP16.21■□□□□ 0.19
HDAC5-203ENST00000586339 WDR5P61964 334 aaKnown RBP16.21■□□□□ 0.19
HDAC5-203ENST00000586339 NFXL1Q6ZNB6 911 aa16.21■□□□□ 0.19
HDAC5-203ENST00000586339 SERINC5Q86VE9 423 aa16.21■□□□□ 0.19
HDAC5-203ENST00000586339 SMARCC2Q8TAQ2 1214 aa16.21■□□□□ 0.19
HDAC5-203ENST00000586339 GPKOWQ92917 476 aaPredicted RBP eCLIP16.21■□□□□ 0.19
HDAC5-203ENST00000586339 SENP7Q9BQF6 1050 aa16.21■□□□□ 0.19
HDAC5-203ENST00000586339 MYL10Q9BUA6 226 aa16.21■□□□□ 0.19
HDAC5-203ENST00000586339 USP26Q9BXU7 913 aa16.21■□□□□ 0.19
HDAC5-203ENST00000586339 H3BRB1 525 aa16.2■□□□□ 0.18
HDAC5-203ENST00000586339 MEIS2O14770 477 aa16.2■□□□□ 0.18
HDAC5-203ENST00000586339 NBNO60934 754 aa16.2■□□□□ 0.18
HDAC5-203ENST00000586339 CAND2O75155 1236 aa16.2■□□□□ 0.18
HDAC5-203ENST00000586339 LGALS2P05162 132 aa16.2■□□□□ 0.18
HDAC5-203ENST00000586339 SEMA3FQ13275 785 aa16.2■□□□□ 0.18
HDAC5-203ENST00000586339 NECTIN1Q15223 517 aa16.2■□□□□ 0.18
HDAC5-203ENST00000586339 BMP2KLQ5H9B9 411 aa16.2■□□□□ 0.18
HDAC5-203ENST00000586339 CREB3L3Q68CJ9 461 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms