RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 FAM50AQ14320 339 aaKnown RBP7.18□□□□□ -1.26
SYNE2-210ENST00000553455 SLC14A2Q15849 920 aa7.18□□□□□ -1.26
SYNE2-210ENST00000553455 BRDTQ58F21 947 aaPredicted RBP7.18□□□□□ -1.26
SYNE2-210ENST00000553455 OTOP1Q7RTM1 612 aa7.18□□□□□ -1.26
SYNE2-210ENST00000553455 OTOP3Q7RTS5 596 aa7.18□□□□□ -1.26
SYNE2-210ENST00000553455 FERMT3Q86UX7 667 aa7.18□□□□□ -1.26
SYNE2-210ENST00000553455 RIOX2Q8IUF8 465 aa7.18□□□□□ -1.26
SYNE2-210ENST00000553455 NUP43Q8NFH3 380 aa7.18□□□□□ -1.26
SYNE2-210ENST00000553455 WDR66Q8TBY9 1149 aa7.18□□□□□ -1.26
SYNE2-210ENST00000553455 USP7Q93009 1102 aa7.18□□□□□ -1.26
SYNE2-210ENST00000553455 TTC1Q99614 292 aa7.18□□□□□ -1.26
SYNE2-210ENST00000553455 EPB41L1Q9H4G0 881 aa7.18□□□□□ -1.26
SYNE2-210ENST00000553455 IFT22Q9H7X7 185 aa7.18□□□□□ -1.26
SYNE2-210ENST00000553455 CABP5Q9NP86 173 aa7.18□□□□□ -1.26
SYNE2-210ENST00000553455 PDLIM7Q9NR12 457 aa7.18□□□□□ -1.26
SYNE2-210ENST00000553455 CATSPERZQ9NTU4 200 aa7.18□□□□□ -1.26
SYNE2-210ENST00000553455 PTPDC1A2A3K4 754 aa7.17□□□□□ -1.26
SYNE2-210ENST00000553455 ALG1L2C9J202 215 aa7.17□□□□□ -1.26
SYNE2-210ENST00000553455 NKRFO15226 690 aaKnown RBP eCLIP7.17□□□□□ -1.26
SYNE2-210ENST00000553455 PSPNO60542 156 aa7.17□□□□□ -1.26
SYNE2-210ENST00000553455 RNASE1P07998 156 aaKnown RBP7.17□□□□□ -1.26
SYNE2-210ENST00000553455 GNAT1P11488 350 aa7.17□□□□□ -1.26
SYNE2-210ENST00000553455 ATP2A2P16615 1042 aaKnown RBP7.17□□□□□ -1.26
SYNE2-210ENST00000553455 PRKCAP17252 672 aa7.17□□□□□ -1.26
SYNE2-210ENST00000553455 GDNFP39905 211 aa7.17□□□□□ -1.26
SYNE2-210ENST00000553455 JAM2P57087 298 aa7.17□□□□□ -1.26
SYNE2-210ENST00000553455 RBM10P98175 930 aaKnown RBP7.17□□□□□ -1.26
SYNE2-210ENST00000553455 GPR19Q15760 415 aa7.17□□□□□ -1.26
SYNE2-210ENST00000553455 CRY1Q16526 586 aa7.17□□□□□ -1.26
SYNE2-210ENST00000553455 MROH9Q5TGP6 573 aa7.17□□□□□ -1.26
SYNE2-210ENST00000553455 FSTL4Q6MZW2 842 aa7.17□□□□□ -1.26
SYNE2-210ENST00000553455 NLRX1Q86UT6 975 aa7.17□□□□□ -1.26
SYNE2-210ENST00000553455 OSTM1Q86WC4 334 aa7.17□□□□□ -1.26
SYNE2-210ENST00000553455 SPPL2CQ8IUH8 684 aa7.17□□□□□ -1.26
SYNE2-210ENST00000553455 OXR1Q8N573 874 aa7.17□□□□□ -1.26
SYNE2-210ENST00000553455 PANK1Q8TE04 598 aa7.17□□□□□ -1.26
SYNE2-210ENST00000553455 SH3RF2Q8TEC5 729 aa7.17□□□□□ -1.26
SYNE2-210ENST00000553455 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.17□□□□□ -1.26
SYNE2-210ENST00000553455 SHISA4Q96DD7 197 aa7.17□□□□□ -1.26
SYNE2-210ENST00000553455 ZEB2O60315 1214 aa7.16□□□□□ -1.26
SYNE2-210ENST00000553455 COL6A2P12110 1019 aa7.16□□□□□ -1.26
SYNE2-210ENST00000553455 TRHRP34981 398 aaPredicted RBP7.16□□□□□ -1.26
SYNE2-210ENST00000553455 EXOSC10Q01780 885 aaKnown RBP7.16□□□□□ -1.26
SYNE2-210ENST00000553455 PLCL1Q15111 1095 aa7.16□□□□□ -1.26
SYNE2-210ENST00000553455 RNF219Q5W0B1 726 aaPredicted RBP7.16□□□□□ -1.26
SYNE2-210ENST00000553455 NECAB2Q7Z6G3 386 aa7.16□□□□□ -1.26
SYNE2-210ENST00000553455 C2orf69Q8N8R5 385 aa7.16□□□□□ -1.26
SYNE2-210ENST00000553455 PIP4K2CQ8TBX8 421 aa7.16□□□□□ -1.26
SYNE2-210ENST00000553455 CHTF18Q8WVB6 975 aa7.16□□□□□ -1.26
SYNE2-210ENST00000553455 CCDC120Q96HB5 630 aa7.16□□□□□ -1.26
SYNE2-210ENST00000553455 C19orf44Q9H6X5 657 aa7.16□□□□□ -1.26
SYNE2-210ENST00000553455 APOBEC2Q9Y235 224 aaKnown RBP7.16□□□□□ -1.26
SYNE2-210ENST00000553455 COA3Q9Y2R0 106 aaPredicted RBP7.16□□□□□ -1.26
SYNE2-210ENST00000553455 WASHC2CQ9Y4E1 1318 aa7.16□□□□□ -1.26
SYNE2-210ENST00000553455 MAN2B1O00754 1011 aa7.15□□□□□ -1.26
SYNE2-210ENST00000553455 GAS7O60861 476 aa7.15□□□□□ -1.26
SYNE2-210ENST00000553455 DGKIO75912 1065 aa7.15□□□□□ -1.26
SYNE2-210ENST00000553455 FKBP9O95302 570 aa7.15□□□□□ -1.26
SYNE2-210ENST00000553455 NTRK1P04629 796 aa7.15□□□□□ -1.26
SYNE2-210ENST00000553455 ZBTB48P10074 688 aaPredicted RBP7.15□□□□□ -1.26
SYNE2-210ENST00000553455 GLI4P10075 376 aa7.15□□□□□ -1.26
SYNE2-210ENST00000553455 LSSP48449 732 aa7.15□□□□□ -1.26
SYNE2-210ENST00000553455 GUCY2FP51841 1108 aa7.15□□□□□ -1.26
SYNE2-210ENST00000553455 IL2P60568 153 aa7.15□□□□□ -1.26
SYNE2-210ENST00000553455 SPIRE1Q08AE8 756 aa7.15□□□□□ -1.26
SYNE2-210ENST00000553455 HHIPL2Q6UWX4 724 aa7.15□□□□□ -1.26
SYNE2-210ENST00000553455 ARHGAP36Q6ZRI8 547 aa7.15□□□□□ -1.26
SYNE2-210ENST00000553455 FKBP9P1Q75LS8 142 aa7.15□□□□□ -1.26
SYNE2-210ENST00000553455 SPATS2Q86XZ4 545 aaKnown RBP7.15□□□□□ -1.26
SYNE2-210ENST00000553455 PTRH1Q86Y79 214 aaKnown RBP7.15□□□□□ -1.26
SYNE2-210ENST00000553455 NOSTRINQ8IVI9 506 aa7.15□□□□□ -1.26
SYNE2-210ENST00000553455 GPR101Q96P66 508 aaPredicted RBP7.15□□□□□ -1.26
SYNE2-210ENST00000553455 METTL14Q9HCE5 456 aaKnown RBP7.15□□□□□ -1.26
SYNE2-210ENST00000553455 SLC6A20Q9NP91 592 aa7.15□□□□□ -1.26
SYNE2-210ENST00000553455 THG1LQ9NWX6 298 aaKnown RBP7.15□□□□□ -1.26
SYNE2-210ENST00000553455 H2AFY2Q9P0M6 372 aaPredicted RBP7.15□□□□□ -1.26
SYNE2-210ENST00000553455 CTNND2Q9UQB3 1225 aa7.15□□□□□ -1.26
SYNE2-210ENST00000553455 ZKSCAN5Q9Y2L8 839 aa7.15□□□□□ -1.26
SYNE2-210ENST00000553455 A0A1W2PQ27 194 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 A0A1W2PQ64 194 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 A0A1W2PQC6 194 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 A0A1W2PQD8 194 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 KCNK3O14649 394 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 ADAM23O75077 832 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 KATNA1O75449 491 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 KRT15P19012 456 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 GALK1P51570 392 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 TMPRSS15P98073 1019 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 ARHGAP44Q17R89 818 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 EMC4Q5J8M3 183 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 TP53INP2Q8IXH6 220 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 AGBL5Q8NDL9 886 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 UHMK1Q8TAS1 419 aaKnown RBP7.14□□□□□ -1.27
SYNE2-210ENST00000553455 USP33Q8TEY7 942 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 COG1Q8WTW3 980 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 BOCQ9BWV1 1114 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 TRIM8Q9BZR9 551 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 EMC7Q9NPA0 242 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 SPTLC3Q9NUV7 552 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 PCMTD2Q9NV79 361 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms