RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 CELA3AP09093 270 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 ZNF865P0CJ78 1059 aaPredicted RBP7.49□□□□□ -1.21
VPS29-210ENST00000552130 PF4V1P10720 104 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 ITIH2P19823 946 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 NTF4P34130 210 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 RAP1GAPP47736 663 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 AK2P54819 239 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 ADCY1Q08828 1119 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 NKPD1Q17RQ9 610 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 SLC10A6Q3KNW5 377 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 FYB2Q5VWT5 728 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 BNC2Q6ZN30 1099 aaPredicted RBP7.49□□□□□ -1.21
VPS29-210ENST00000552130 AGMOQ6ZNB7 445 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 EPM2AIP1Q7L775 607 aaPredicted RBP7.49□□□□□ -1.21
VPS29-210ENST00000552130 SIAH1Q8IUQ4 282 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 STK35Q8TDR2 534 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 MYD88Q99836 296 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 ACAD8Q9UKU7 415 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 ANKRD6Q9Y2G4 727 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 PCDHGB3Q9Y5G1 929 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 A0A087WZG4 1122 aa7.48□□□□□ -1.21
VPS29-210ENST00000552130 SNUPNO95149 360 aaKnown RBP7.48□□□□□ -1.21
VPS29-210ENST00000552130 ATICP31939 592 aa7.48□□□□□ -1.21
VPS29-210ENST00000552130 RXRGP48443 463 aa7.48□□□□□ -1.21
VPS29-210ENST00000552130 ZP2Q05996 745 aa7.48□□□□□ -1.21
VPS29-210ENST00000552130 PPP2R3AQ06190 1150 aa7.48□□□□□ -1.21
VPS29-210ENST00000552130 ABCB5Q2M3G0 1257 aa7.48□□□□□ -1.21
VPS29-210ENST00000552130 TPTE2Q6XPS3 522 aa7.48□□□□□ -1.21
VPS29-210ENST00000552130 RUFY4Q6ZNE9 571 aa7.48□□□□□ -1.21
VPS29-210ENST00000552130 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.48□□□□□ -1.21
VPS29-210ENST00000552130 GIMAP8Q8ND71 665 aaPredicted RBP7.48□□□□□ -1.21
VPS29-210ENST00000552130 IL17REQ8NFR9 667 aa7.48□□□□□ -1.21
VPS29-210ENST00000552130 GOLGA1Q92805 767 aa7.48□□□□□ -1.21
VPS29-210ENST00000552130 LIN37Q96GY3 246 aaPredicted RBP7.48□□□□□ -1.21
VPS29-210ENST00000552130 PAWRQ96IZ0 340 aaKnown RBP7.48□□□□□ -1.21
VPS29-210ENST00000552130 MYCBPQ99417 103 aaPredicted RBP7.48□□□□□ -1.21
VPS29-210ENST00000552130 TTC1Q99614 292 aa7.48□□□□□ -1.21
VPS29-210ENST00000552130 MRPL4Q9BYD3 311 aaKnown RBP7.48□□□□□ -1.21
VPS29-210ENST00000552130 ANLNQ9NQW6 1124 aa7.48□□□□□ -1.21
VPS29-210ENST00000552130 TMEM39AQ9NV64 488 aa7.48□□□□□ -1.21
VPS29-210ENST00000552130 LPOP22079 712 aaPredicted RBP7.47□□□□□ -1.21
VPS29-210ENST00000552130 CYP2C19P33261 490 aa7.47□□□□□ -1.21
VPS29-210ENST00000552130 CLCQ05315 142 aa7.47□□□□□ -1.21
VPS29-210ENST00000552130 ZNF252P-AS1Q0IIN9 211 aa7.47□□□□□ -1.21
VPS29-210ENST00000552130 GTF2H3Q13889 308 aa7.47□□□□□ -1.21
VPS29-210ENST00000552130 MPP2Q14168 576 aa7.47□□□□□ -1.21
VPS29-210ENST00000552130 PCBP1Q15365 356 aaKnown RBP eCLIP7.47□□□□□ -1.21
VPS29-210ENST00000552130 CYB5RLQ6IPT4 315 aa7.47□□□□□ -1.21
VPS29-210ENST00000552130 TTBK2Q6IQ55 1244 aa7.47□□□□□ -1.21
VPS29-210ENST00000552130 LDHAL6AQ6ZMR3 332 aa7.47□□□□□ -1.21
VPS29-210ENST00000552130 C1orf122Q6ZSJ8 110 aa7.47□□□□□ -1.21
VPS29-210ENST00000552130 TTC6Q86TZ1 520 aa7.47□□□□□ -1.21
VPS29-210ENST00000552130 PNMA8AQ86V59 439 aaPredicted RBP7.47□□□□□ -1.21
VPS29-210ENST00000552130 ACRBPQ8NEB7 543 aa7.47□□□□□ -1.21
VPS29-210ENST00000552130 USP7Q93009 1102 aa7.47□□□□□ -1.21
VPS29-210ENST00000552130 PPP1R16BQ96T49 567 aa7.47□□□□□ -1.21
VPS29-210ENST00000552130 CDC6Q99741 560 aa7.47□□□□□ -1.21
VPS29-210ENST00000552130 BRMS1Q9HCU9 246 aa7.47□□□□□ -1.21
VPS29-210ENST00000552130 KMT5AQ9NQR1 393 aa7.47□□□□□ -1.21
VPS29-210ENST00000552130 LMCD1Q9NZU5 365 aa7.47□□□□□ -1.21
VPS29-210ENST00000552130 SAP30BPQ9UHR5 308 aaKnown RBP7.47□□□□□ -1.21
VPS29-210ENST00000552130 FEZ2Q9UHY8 353 aaPredicted RBP7.47□□□□□ -1.21
VPS29-210ENST00000552130 PITPNM2Q9BZ72 1349 aa7.47□□□□□ -1.21
VPS29-210ENST00000552130 DNAJC8O75937 253 aaPredicted RBP7.46□□□□□ -1.22
VPS29-210ENST00000552130 POU3F2P20265 443 aaPredicted RBP7.46□□□□□ -1.22
VPS29-210ENST00000552130 LMNB1P20700 586 aa7.46□□□□□ -1.22
VPS29-210ENST00000552130 CCND1P24385 295 aa7.46□□□□□ -1.22
VPS29-210ENST00000552130 AFMP43652 599 aa7.46□□□□□ -1.22
VPS29-210ENST00000552130 MAPK9P45984 424 aa7.46□□□□□ -1.22
VPS29-210ENST00000552130 CLK1P49759 484 aaKnown RBP7.46□□□□□ -1.22
VPS29-210ENST00000552130 NEK4P51957 841 aa7.46□□□□□ -1.22
VPS29-210ENST00000552130 RING1Q06587 406 aa7.46□□□□□ -1.22
VPS29-210ENST00000552130 IKZF1Q13422 519 aa7.46□□□□□ -1.22
VPS29-210ENST00000552130 TRIM14Q14142 442 aa7.46□□□□□ -1.22
VPS29-210ENST00000552130 NCAPHQ15003 741 aa7.46□□□□□ -1.22
VPS29-210ENST00000552130 FAM209AQ5JX71 171 aa7.46□□□□□ -1.22
VPS29-210ENST00000552130 DTHD1Q6ZMT9 781 aa7.46□□□□□ -1.22
VPS29-210ENST00000552130 OTOP3Q7RTS5 596 aa7.46□□□□□ -1.22
VPS29-210ENST00000552130 CCDC84Q86UT8 332 aaPredicted RBP7.46□□□□□ -1.22
VPS29-210ENST00000552130 MYLK4Q86YV6 388 aaPredicted RBP7.46□□□□□ -1.22
VPS29-210ENST00000552130 SPATA5Q8NB90 893 aa7.46□□□□□ -1.22
VPS29-210ENST00000552130 NAXEQ8NCW5 288 aa7.46□□□□□ -1.22
VPS29-210ENST00000552130 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.46□□□□□ -1.22
VPS29-210ENST00000552130 GATAD2BQ8WXI9 593 aa7.46□□□□□ -1.22
VPS29-210ENST00000552130 RPGRQ92834 1020 aaKnown RBP7.46□□□□□ -1.22
VPS29-210ENST00000552130 ZNF622Q969S3 477 aaKnown RBP eCLIP7.46□□□□□ -1.22
VPS29-210ENST00000552130 PPM1MQ96MI6 270 aa7.46□□□□□ -1.22
VPS29-210ENST00000552130 OSBPL5Q9H0X9 879 aaPredicted RBP7.46□□□□□ -1.22
VPS29-210ENST00000552130 EPN3Q9H201 632 aa7.46□□□□□ -1.22
VPS29-210ENST00000552130 SH3GLB2Q9NR46 395 aa7.46□□□□□ -1.22
VPS29-210ENST00000552130 RASSF1Q9NS23 344 aa7.46□□□□□ -1.22
VPS29-210ENST00000552130 C19orf73Q9NVV2 129 aa7.46□□□□□ -1.22
VPS29-210ENST00000552130 GIT1Q9Y2X7 761 aa7.46□□□□□ -1.22
VPS29-210ENST00000552130 FAM170AA1A519 330 aa7.45□□□□□ -1.22
VPS29-210ENST00000552130 K7ENM7 598 aa7.45□□□□□ -1.22
VPS29-210ENST00000552130 NEMP1O14524 444 aa7.45□□□□□ -1.22
VPS29-210ENST00000552130 ASGR2P07307 311 aa7.45□□□□□ -1.22
VPS29-210ENST00000552130 GLI1P08151 1106 aa7.45□□□□□ -1.22
VPS29-210ENST00000552130 NCAM1P13591 858 aa7.45□□□□□ -1.22
VPS29-210ENST00000552130 ARNTP27540 789 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms